Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20ampelina_20[genbank_20GCA_5F001006365.1_202015-05-13] 2,383 sequences; 47,325,858 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq1963 168 8e-37 seq1786 98.7 1e-15 >seq1963 Length=539952 Score = 168 bits (186), Expect = 8e-37 Identities = 1129/1784 (63%), Gaps = 59/1784 (3%) Strand=Plus/Plus Query 110331 TGAACTGAATTGGTCGGGCTTTCGCCTTTGATCGGAGATAGTACATCCCGGTCTTGAGTC 110390 |||| ||||| ||| ||| |||| | ||||| |||||||| || |||||||| | Sbjct 428862 TGAATTGAATGGGTGCGGCAGCTGCCTGAGTGCGGAGGTAGTACATGCCAGTCTTGAGGC 428921 Query 110391 CTTGTTTCCATGCGTACATATGCATAGAAGAGAGCTTGGACATCGTTGGACTTTC-CATG 110449 | | ||||| || | |||||| | || |||| ||| | || || || |||| Sbjct 428922 CGAGCTTCCAGCCGGCGAAATGCATGCTGGTGATCTTGCCCATGGACGG-CTCTCGCATG 428980 Query 110450 AAGAGGTTCAT--ACTTTGACTTTGGTCAATGAAGCGCCCCCGTTGTGCCGCCATATCAA 110507 || ||| | ||| |||| |||| ||||| || || | || ||||| | | Sbjct 428981 TGGATGTTGAGTGACTGGGACT--GGTCGATGAATGCACCACGGTCAGCAGCCATCTGCA 429038 Query 110508 TGACATCCTTCATCTTA---ATTTCCCAAACTGTGCGATAGAGATTCTTGATATCATCTG 110564 | | || ||| | ||||||||||| || || || |||||| ||| | | Sbjct 429039 CAATAG---TCCTCTGAGAGATTTCCCAAACGGTCTTGTACAGGGCCTTGATGTCAGCCG 429095 Query 110565 GGATATCTGAGA-TATTCTGGATGGAACCCCCCGCCTTCACCATGAGATCCTTCATATCC 110623 |||| ||| || | ||||| |||||||| || | | || | | |||||| || Sbjct 429096 GGATG-CTGGGAATGTTCTGTATGGAACCATCCTCGGCGATGATACGGTTCTTCATGGCC 429154 Query 110624 TTGGACCAGAGACCAATCTTCTTGAGGTCATTGACGAGGTGCTTGTTGACAATGACAAAC 110683 | ||||| | || | || | | ||| ||| || |||||||| ||| Sbjct 429155 TCAGACCACAAGCCGAGCTCTGTCAAGTCCCTGAGAAGCCAAGGGTTGACAACCTGGAAC 429214 Query 110684 TCACCTGCGAGGGTTCTTCTCAGGTAGATGTTTGTTGTGTATGGTTCAAAGCATTCATTA 110743 || || ||||| | || | |||||||||| | |||||||| || ||||| || || Sbjct 429215 TCGCCAGCGAGCACACGTCGCTGGTAGATGTTGGAGGTGTATGGCTCGAAGCACTCGTTG 429274 Query 110744 TTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGA 110803 || |||| ||| || | |||||| || || |||||||| |||| || | ||||| || Sbjct 429275 TTGCCCAGGATCTGCGAGGTGGATGCAGTGGGCATTGGCGCCAGTAACAAGCTGTTGCGG 429334 Query 110804 AGACCCTTCTCCTTGATGCGTTCCTTGAGAACATCCCAGTCGTAGTT-GAGCTTGGTTTC 110862 | ||| |||||||||| |||||||| | |||||||| || | | ||| || Sbjct 429335 ACACCGGTCTCCTTGATCTTGTCCTTGAGGGCTTCCCAGTCCCAGAGCGCGGATGGCTTG 429394 Query 110863 ACCTTCCCACATGTCAAACTGAAGCACCCCTTGGGACGCGGGAGAACCCTCAAAGGTTTC 110922 || |||| ||||||| |||||||| | || || || | ||| ||||| | || | Sbjct 429395 ACATTCC-ACATGTCGAACTGAAGGATGCCCTGTGAGACCGGACTGCCCTCGTACGTCTT 429453 Query 110923 ATA-GGAACCTTGGGCTTCAGCCAAT-TCACAGCTCGCCTCCAGGGATGCGTGATACATG 110980 || || ||| ||| | |||| || | || || | ||||| || || Sbjct 429454 GTACGGGCCCTCCACCTT--GGCAATATCGCTTGATGCGGTAAGAGCAGCGTGGTAGATA 429511 Query 110981 GTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCTGAATC-AAATGCGTA-GCGGC 111038 || || ||||| | |||| ||| ||| || || || ||| || || | | Sbjct 429512 GTCTCGAAGATCTGCTTGTTCAGCTCACGGGCCTCGGGGGAGTCGAAAGGCATACGAAGG 429571 Query 111039 ACAAAATAAATACATCCGCGAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATAT 111098 | || || |||| || ||||| || ||||| | |||||| |||| |||||||| | Sbjct 429572 GCCAAG--AACGCATCAGCAAGACCCTGGACACCAACACCAATCGGTCGATGTCGCATGT 429629 Query 111099 TAGACTTTCGCGCAGTCTCAACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTT 111158 | || || || || || || || ||||||| ||| || || Sbjct 429630 TGCTGTTGTAGGCCTCCTTGACTGGGTAGTGGTTGACATCAATGATCTTGTTCAGGTTGC 429689 Query 111159 TGGTAACAATCTTTGTGATTTCATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCAT 111218 | || | || || | ||||| | | || | | | || | | |||| Sbjct 429690 GGACGACGACCTGGGTAACCTCATGCAACTGTTGGAAGTTGTA---GCAGTTGTTGTCAT 429746 Query 111219 TG---ACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTAT 111275 | || ||| || ||||| || || |||| ||||||||||| |||||| Sbjct 429747 AGTCCACGTACGCCGGCAGGGCAATAGAGGCCAGGTTGCAAACAGCGACCTCATCAGGGG 429806 Query 111276 CTGTGTACTCTAAAATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTT 111335 | |||||| | || || || || | ||| || || || || |||| || || | Sbjct 429807 CACAGTACTCGATGATCTCAGTGCAGAGGTTTGAGCTGCGGATGGTACCCAGGTTTTTCT 429866 Query 111336 GGTTACTCTTCTTGTTGCACGCA-TCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTC 111394 |||| ||||| ||| | || || ||||| |||||| |||| | || ||||| ||| Sbjct 429867 GGTTGCTCTTTCGGTT-CGCGTGGTCTTTGTATAGCATGAAGGGGTTGCCAGTCTCGGTC 429925 Query 111395 TGTGATTTGAGAATAGCCTTCCA-AACATCGGCGGCTGGTACAATGGCGTTGG---CCCG 111450 || | | ||| || || | ||| ||| || | | || |||| ||| | || Sbjct 429926 TGAGCCTCGAGGATGGCGTACCACAACTTCTGGGCCTTC----ATGGTCTTGCGACCGCG 429981 Query 111451 TCCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAG 111510 |||||| ||||||||| |||||| || |||||||||||||| ||||| || Sbjct 429982 GCCCTCCTTCTCGTACTTCTCGTAGAGAGCCTCAAACTCCTCACCGTAGCAGTCGGCAAG 430041 Query 111511 ACCTGGTGCCTTGTCTGGACAGAAAAGAGACCATTGACCACCTTCCTCAACCCGCTTCAT 111570 || || || | || || | || | ||| | || | ||| ||||||||||| Sbjct 430042 TCCAGGGCACTCATTGGGGCACATGAGGGTCCACTCGCCGTTCTTCTCGACCCGCTTCAT 430101 Query 111571 GAAAAGGTCTGGAATCCACAGGG-ATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCAC 111629 ||| || || || ||||| || | | | ||| ||||| | || ||| || | | Sbjct 430102 GAACAGATCGGGGATCCAGAGTGCAAGGAAA-AGATCACGGGCTCGGATCTCCTCCTTGC 430160 Query 111630 CTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGA 111689 | ||||| || | ||||| ||||| | || || ||||||||||||||||| |||| Sbjct 430161 CGTGGTTCTTGCGCAGGTCAAGAAACTCGAAGACGTCTGCGTGCCATGGCTCAAGGTAGA 430220 Query 111690 CTGCGATAGATCC------CTT-TCGACGCCCAGCTTGATTTACATAGCGCGCTGTGGCG 111742 |||| | || ||| | | ||||| || | ||||| || || || | Sbjct 430221 TAGCGAAGGCACCGGGACGCTTGTTGCCGCCC----TGGTCGACATATCGGGCAGTATTG 430276 Query 111743 TTAAATACGCGAAGCATTGGAATAATACCATCTGATTGACCATTTGT-CCCCCGA-ATAC 111800 ||||| || || | ||| || | || |||| || || || || || ||| || Sbjct 430277 TTAAAGACCCGCAACATGGGGGTGATGCCATTGGAAGTGCCGTTAGTACCAGCGATGTAT 430336 Query 111801 GAGATTTATTGGCTCTCACATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGA 111860 ||| |||| | | | |||| || | || ||||| || ||| ||| |||| Sbjct 430337 GAG--CCGGTGGCACGGATACGGTGGACGTTGAGGCCGATACCTCCCGCCATCTTGGAGA 430394 Query 111861 TTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGA 111920 | ||||| | | || || | ||||| || | || ||||||||| | ||| Sbjct 430395 TCATGGCACAGGTCTTGAGCGTGTCGTAGATGCCCTCAATGCTGTCCTCCTTCATATCGA 430454 Query 111921 TAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTG 111980 |||||||| |||| ||| || || || ||||||||||| | || || | | Sbjct 430455 CGAGGAAGCACGATGACAGCTGGGGCTGGGGAGTGCCAGCATTGAATAATGTGGGCGAGG 430514 Query 111981 CGTGAATGAACATACCT-TGGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCT 112039 |||| |||| | || | | ||||||| || ||| ||||| | ||| || | ||| Sbjct 430515 CGTGGGTGAAGA-ACTTGTTGGACATCAGGTTGTACGTCTCGATGACTCTCTCGACGTCA 430573 Query 112040 TCCCCGTGGATGCCGATTGCGACCCGCATGAACATGTACTGTGG 112083 || || |||||||| ||||| ||||||| ||||| ||||| Sbjct 430574 TCTCCCCAGATGCCGACAGCGACACGCATGATCATGTGTTGTGG 430617 >seq1786 Length=271448 Score = 98.7 bits (108), Expect = 1e-15 Identities = 292/445 (66%), Gaps = 4/445 (1%) Strand=Plus/Minus Query 122371 TAGTCCCCGACCCGCTTCTCAAAGAAGTTGGTCTTCCCATCAAGGCTAATGTTTTCCATA 122430 ||||| ||||| |||||||| |||||||||||||| ||| | ||| ||||| ||||| Sbjct 165763 TAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCACCGAGGGAGATGTTCTCCATG 165704 Query 122431 AAGTCAAATGGATTCTTCGCGTTCCAAATGG-GTGGCACCCCAACTTGTTTGAGGAGACG 122489 ||||| || || || || || ||| || | |||| | ||||| || Sbjct 165703 AAGTCGAAGGGGTTGGACGACTTGTAAACCTTGTCGTTGCCCAGGGCGACC-AGGAGGCG 165645 Query 122490 ATCCGACACATACTCAATGTACTCGGACATCTTCTCAGAGTTCATACCGATGAGGTTACA 122549 || | ||| | || ||||||| ||| | ||||||||| |||| |||| ||| Sbjct 165644 GTCGGCGACAAATTCGATGTACTGCTTCATGAGGTTAGAGTTCATGCCGAGGAGGGCACA 165585 Query 122550 TGGGAGTGCGTCCAAGATGAACCCTTTCTCAATCTCAACCGCCTCTTTCACGATGGCGTG 122609 ||| || || || | || | ||||| || | || ||||| | | |||| | || Sbjct 165584 TGGCAGAGCCTCGGTCAAAAATTCCTTCTCGATGGCGACAGCCTCGGTGATGATGTCCTG 165525 Query 122610 GATAGTTTCGGTAGTGGGTCTATTACGCAAAGTCTT-GAAGAGCTCCACGGCAAACTCCT 122668 || | | | |||| || | | || ||| ||| ||| || || Sbjct 165524 GACGCGCTGCTTGCTTGGTCGGTT-CTTGAGGTGGGAGAACAGCAGACAGGCGAAGTCGG 165466 Query 122669 GGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTGGCATGAGAC 122728 ||| ||||||||||| || || || ||||| || |||||| || || |||||||| | Sbjct 165465 TGTGCAGACCCTCATCACGAGAGATCAGTTCGTTGGAGAAGGTCAGGCCAGGCATGAGCC 165406 Query 122729 CCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACAC 122788 | |||||||| | ||| | || | ||||| ||| ||||||||||||||| || Sbjct 165405 CACGCTTCTTGAGCCAGAAGATGGAAGCGAATGCGCCGCTGAAGAAGATACCCTCGACGG 165346 Query 122789 ACGCAAACGCAAAAAGGCGTTCGGC 122813 ||||| |||| || || | ||| Sbjct 165345 CGGCAAAGGCAACCAGTCGCTGGGC 165321 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628013292496800