Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20ampelina_20[genbank_20GCA_5F001006365.1_202015-05-13] 2,383 sequences; 47,325,858 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq1963 250 3e-61 >seq1963 Length=539952 Score = 250 bits (276), Expect = 3e-61 Identities = 1158/1813 (64%), Gaps = 45/1813 (2%) Strand=Plus/Plus Query 117805 TGAACTGAATGGGTCTCGCCTTGGCCTTTGATCGGAGGTAGTACATCCCCGTCTTGAGCC 117864 |||| ||||||||| || |||| | |||||||||||||| || |||||||| | Sbjct 428862 TGAATTGAATGGGTGCGGCAGCTGCCTGAGTGCGGAGGTAGTACATGCCAGTCTTGAGGC 428921 Query 117865 CCTGCTTCCAGGCATACATATGCATTGAGGACAACTTGGAGAGGGTTGGACTTTC-CATG 117923 | |||||||| | | |||||| || | |||| | || || || || |||| Sbjct 428922 CGAGCTTCCAGCCGGCGAAATGCATGCTGGTGATCTTGCCCATGGACGG-CTCTCGCATG 428980 Query 117924 AAGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCCCGATCCGCCGCCATATCAATC 117983 || ||| | ||||| || |||||||| || || || || ||||| | | Sbjct 428981 TGGATGTTGAGTGACTGGGACTGGTCGATGAATGCACCACGGTCAGCAGCCATCTG---C 429037 Query 117984 ACATCCTTCATCTT---GATTTCCCACACAGTCCTGTAGAGGTTCTTAATATCATCTGGG 118040 ||| || ||| ||||||||| || ||| |||| ||| ||| || ||| | ||| Sbjct 429038 ACAATAGTCCTCTGAGAGATTTCCCAAACGGTCTTGTACAGGGCCTTGATGTCAGCCGGG 429097 Query 118041 ATATCCACGATATTTTGGATGGATCCACCCGCCTTGACCATGAGATCCTTCATATCCTTT 118100 || || || || ||||| ||| || | || || | | |||||| ||| Sbjct 429098 ATGCTGGGAATGTTCTGTATGGAACCATCCTCGGCGATGATACGGTTCTTCATGGCCTCA 429157 Query 118101 GACCAGAGACCAATCTTTTTGAGATCCTCCACGAGATGCTTA---TTGACAACAACAAAC 118157 ||||| | || | || | | | ||| |||| || | |||||||| ||| Sbjct 429158 GACCACAAGCCGAGCTCTGTCAAGTCCCT---GAGAAGCCAAGGGTTGACAACCTGGAAC 429214 Query 118158 TCACCCGCGAGGGTGCGTCTCAGATAGATATTGGTCGTGTATGGCTCAAAGCACTCATTG 118217 || || ||||| |||| | | ||||| |||| ||||||||||| |||||||| ||| Sbjct 429215 TCGCCAGCGAGCACACGTCGCTGGTAGATGTTGGAGGTGTATGGCTCGAAGCACTCGTTG 429274 Query 118218 TTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGG 118277 || |||| ||| || | ||||| || |||||||| || |||| | | |||||| ||| Sbjct 429275 TTGCCCAGGATCTGCGAGGTGGATGCAGTGGGCATTGGCGCCAGTAACAAGCTGTTGCGG 429334 Query 118278 AGACCCTTTTCCCTAATGCGTTCCTTGAGAGCGTCCCAGTCGTAGTTGAGC-TTTGTCTC 118336 | ||| | ||| | || |||||||| || |||||||| || | || || || Sbjct 429335 ACACCGGTCTCCTTGATCTTGTCCTTGAGGGCTTCCCAGTCCCAG-AGCGCGGATGGCTT 429393 Query 118337 CCCCTGCCACATATCAAACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTC 118396 | | |||||| || ||||| ||||| || || || | || ||||| | |||| Sbjct 429394 GACATTCCACATGTCGAACTGAAGGATGCCCTGTGAGACCGGACTGCCCTCGTACGTCTT 429453 Query 118397 ATATGGGCCCTCAACCTCCGCCAATTCGGAGCTCGCCTCG---AGGGCTGCGTGATACAT 118453 || |||||||| |||| || | || ||| | || || || ||||| || || Sbjct 429454 GTACGGGCCCTCCACCTTGGCAATATC---GCTTGATGCGGTAAGAGCAGCGTGGTAGAT 429510 Query 118454 TGTTTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCG--G 118511 || || || || | |||| | ||||||| ||| || || | | || | Sbjct 429511 AGTCTCGAAGATCTGCTTGTTCAGCTCACGGGCCTCGGGGGAGTCGAAAGGCATACGAAG 429570 Query 118512 CACAAAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATA 118571 | || || |||| || ||||| |||||||| | ||||| || ||||||| ||| Sbjct 429571 GGCCAA--GAACGCATCAGCAAGACCCTGGACACCAACACCAATCGGTCGATGTCGCATG 429628 Query 118572 TTAGACTTCCGAGCGGTCTCCACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTT 118631 || || || || || || || || ||| || | | | || || || Sbjct 429629 TTGCTGTTGTAGGCCTCCTTGACTGGGTAGTGGTTGACATCAATGATCTTGTTCAGGTTG 429688 Query 118632 TTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCA 118691 | ||| |||| || | ||||| | || || | | | | | | | || | Sbjct 429689 CGGACGACGACCTGGGTAACCTCATGCAACTGTTGGAAGTTGTAGCAGTTGTTGTCATAG 429748 Query 118692 TTGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCA 118751 | || ||| || ||||| || || ||||| || || |||| | |||||| || Sbjct 429749 TCCACGTACGCCGGCAGGGCAATAGAGGCCAGGTTGCAAACAGCGACCTCATCAGGGGCA 429808 Query 118752 GTGTACTCTATAATTTCCGTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGA 118811 |||||| || || || ||||| | |||||| || ||||| |||| ||| || || Sbjct 429809 CAGTACTCGATGATCTCAGTGCAGAGGTTTGAGCTGCGGATGGTACCCAGGTTTTTCTGG 429868 Query 118812 TTTGACTTTGTGTTACACG-CATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTG 118870 || |||| ||| | || || ||||| |||||| | || | || ||||| || || Sbjct 429869 TTGCTCTTTCGGTT-CGCGTGGTCTTTGTATAGCATGAAGGGGTTGCCAGTCTCGGTCTG 429927 Query 118871 GGACTTGAGAATAGCCTTCCA-GACATCGGCAGCTGGCACAGTGGCGTTG---GCTCGCC 118926 | || ||| || || | ||| || || | || || ||| ||| | || | Sbjct 429928 AGCCTCGAGGATGGCGTACCACAACTTCTG-GGCCTTCA---TGGTCTTGCGACCGCGGC 429983 Query 118927 CCTCTTCCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCC 118986 |||| | ||||||||| |||||| || |||||||| ||||| | || | || | Sbjct 429984 CCTCCTTCTCGTACTTCTCGTAGAGAGCCTCAAACTCCTCACCGTAGCAGTCGGCAAGTC 430043 Query 118987 CTGGTGCCTTATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGA 119046 | || || || ||||| | ||| | ||| | || || ||| ||||||||||||| Sbjct 430044 CAGGGCACTCATTGGGGCACATGAGGGTCCACTCGCCGTTCTTCTCGACCCGCTTCATGA 430103 Query 119047 AGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCT 119106 | || || ||||||||||| || ||| ||||| || || || || | || | Sbjct 430104 ACAGATCGGGGATCCAGAGTGCAAGGAAAAGATCACGGGCTCGGATCTCCTCCTTGCCGT 430163 Query 119107 GATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCG 119166 | || |||| || | ||| || | || || |||||||| || || ||||| | | Sbjct 430164 GGTTCTTGCGCAGGTCAAGAAACTCGAAGACGTCTGCGTGCCATGGCTCAAGGTAGATAG 430223 Query 119167 CGATTGACCCCTTACG---ACGACCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATA 119223 ||| | || ||| || |||||| ||||| | ||||| |||||| | Sbjct 430224 CGAAGGCACCGGGACGCTTGTTGCCGCCCTGGTCGACATATCGGGCAGTATTGTTAAAGA 430283 Query 119224 CACGAAGCATTGGAATGATACCATCGGATTGGCCATTTGT-CCCCCGA-ATACGAGACTT 119281 | || | ||| || |||| |||| ||| ||| || || || ||| || ||| | Sbjct 430284 CCCGCAACATGGGGGTGATGCCATTGGAAGTGCCGTTAGTACCAGCGATGTATGAGCC-- 430341 Query 119282 ATTGGCTCTGACATCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGC 119341 |||| | || | ||||| || | || ||||| || ||| ||| ||||| || Sbjct 430342 GGTGGCACGGATACGGTGGACGTTGAGGCCGATACCTCCCGCCATCTTGGAGATCATGGC 430401 Query 119342 GCACTCCGTGAGACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAA 119401 || | |||| || ||||||| || || || ||| |||| | ||| |||||| Sbjct 430402 ACAGGTCTTGAGCGTGTCGTAGATGCCCTCAATGCTGTCCTCCTTCATATCGACGAGGAA 430461 Query 119402 GCAGCTCGACATTTGAGGCCTGGGTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGAT 119461 ||| |||| || ||| ||| || ||||| ||||| | || || | |||||| | Sbjct 430462 GCACGATGACAGCTGGGGCTGGGGAGTGCCAGCATTGAATAATGTGGGCGAGGCGTGGGT 430521 Query 119462 GAACATACCT-TGGGACATCTTGTCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGT 119520 ||| | || | | ||||||| || ||| ||||| | ||| | ||| || || Sbjct 430522 GAAGA-ACTTGTTGGACATCAGGTTGTACGTCTCGATGACTCTCTCGACGTCATCTCCCC 430580 Query 119521 GAATACCGATCGAGACCCGCATAAACATGTATTGGGGTGTTTCCATCAGGATACCATCGA 119580 || |||| | ||| ||||| | ||||| ||| || || | | |||| |||| Sbjct 430581 AGATGCCGACAGCGACACGCATGATCATGTGTTGTGGCCGCTCGACGACTTTACCGTCGA 430640 Query 119581 GCCTCTGGAGGTA 119593 || || | ||||| Sbjct 430641 GCTTCAGCAGGTA 430653 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618416778361480