Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20ampelina_20[genbank_20GCA_5F001006365.1_202015-05-13] 2,383 sequences; 47,325,858 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq1808 96.9 2e-15 >seq1808 Length=99283 Score = 96.9 bits (106), Expect = 2e-15 Identities = 171/245 (70%), Gaps = 11/245 (4%) Strand=Plus/Plus Query 34471 CAATCGTC-----GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAA 34525 |||||||| ||| || | |||||| | |||||| || || ||| |||||| |||| Sbjct 19309 CAATCGTCTACTGGCCACCACGAAGACGGAGCACCAAGTGCAGCGTGGACTCCTTCTGAA 19368 Query 34526 TGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCT 34585 |||| || || || | || || ||||||| || || || || || || || | || | Sbjct 19369 TGTTGTAGTCAGACAAAGTCCGGCCGTCTTCCAGCTGCTTGCCAGCGAAAATGAGTCGTT 19428 Query 34586 GTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTG 34644 | ||||| || || | ||||||||||| ||| || | || ||| | ||| ||| Sbjct 19429 GCTGGTCTGGTGGGATGCCCTCCTTGTC-CTGAATCTTCGACTTGACGTTGTCAATCGTG 19487 Query 34645 TCTTCGCT--CTCCACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCT 34702 || || | ||| || || | || || || || || || || || ||||||||||||| Sbjct 19488 TC--CGATGACTCAACCTCGAGCGTAATAGTCTTCCCCGTCAAGGTCTTCACAAAAATCT 19545 Query 34703 GCATG 34707 ||||| Sbjct 19546 GCATG 19550 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314720459367239