Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20ampelina_20[genbank_20GCA_5F001006365.1_202015-05-13] 2,383 sequences; 47,325,858 total letters Query= NC_030394.2 Length=126965 Score E Sequences producing significant alignments: (Bits) Value seq1540 109 4e-19 >seq1540 Length=209369 Score = 109 bits (120), Expect = 4e-19 Identities = 141/192 (73%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 29624 GGCTCCCTCTCGAGCTGAATCCTCAGCGGTTCCACGTGGTCAAGGTAGACGTGAGCATCT 29683 ||||||||||| ||||| | ||| || | || |||||||| ||||||||| || || Sbjct 103180 GGCTCCCTCTCCAGCTGCACCCTGAGGGCATCGACGTGGTCCGCGTAGACGTGCGCGTCG 103239 Query 29684 CCCAGGGTGTG-GACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAGCCATCATGTACGT 29742 |||| | ||| | | ||| ||||| || || ||||| || ||||||| || Sbjct 103240 CCCATGACGTGCGTGAGGCTC-CCCGGGATGAGGTCGCACACGTGCGCGATCATGTGTGT 103298 Query 29743 GAGGAGAGAGTAGCTGGCGATGTTAAAGGGCACCCCGAGCCCCATGTCCCCTGACCTCTG 29802 || || |||||||| |||||||| || ||||| || || |||||||| | || | ||| Sbjct 103299 CAGCAGCGAGTAGCTCGCGATGTTGAACGGCACGCCCAGGCCCATGTCGCAGGAGCGCTG 103358 Query 29803 GTAGAGCTGGCA 29814 ||| |||||||| Sbjct 103359 GTACAGCTGGCA 103370 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406151403878338