Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20ampelina_20[genbank_20GCA_5F001006365.1_202015-05-13] 2,383 sequences; 47,325,858 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq1963 86.0 9e-12 >seq1963 Length=539952 Score = 86.0 bits (94), Expect = 9e-12 Identities = 319/497 (64%), Gaps = 15/497 (3%) Strand=Plus/Plus Query 76812 GTACGTAGATAGTACATACCAGTTTTTAGACCCAGACTCCATCCGTAGAAATGCATGCTT 76871 || || || |||||||| ||||| || || || || |||| ||| |||||||||||| Sbjct 428891 GTGCGGAGGTAGTACATGCCAGTCTTGAGGCCGAGCTTCCAGCCGGCGAAATGCATGCTG 428950 Query 76872 GTCAGTTTGGAATAACTAGGATCGGCT-----ATATGAATATTCATCGACTGACTTTGAT 76926 || | ||| | | | ||||| || || || || | ||||| || | Sbjct 428951 GTGATCTTG-----CCCATGGACGGCTCTCGCATGTGGATGTTGAGTGACTGGGACTGGT 429005 Query 76927 CGATGAAAGCTCCTCTATCAGCCGCCATTTTTATAATGGTCTTTTGAGGAATTTCCCAAA 76986 ||||||| || || | ||||| ||||| | | ||| ||| | |||| |||||||||| Sbjct 429006 CGATGAATGCACCACGGTCAGCAGCCATCTGCACAATAGTCCTCTGAGAGATTTCCCAAA 429065 Query 76987 TAGTTTTGAAAACTTGTTTGATATCATCTGGAAGGTTTG---TATTTTGAATGGAACCAC 77043 || ||| | | ||||| ||| | || | | | | | || || ||||||||| Sbjct 429066 CGGTCTTGTACAGGGCCTTGATGTCAGCCGGGATGCTGGGAATGTTCTGTATGGAACCAT 429125 Query 77044 CATCTGATATAATTGTATTCTTTATATCATCATTCCACAATTTCCTCTCTGTTAAAACTC 77103 | || | || || ||||| || | ||| |||||| |||||| || | | Sbjct 429126 CCTCGGCGATGATACGGTTCTTCATGGCCTCAGACCACAAGCCGAGCTCTGTCAAGTCCC 429185 Query 77104 TAAGGAGATGAGGATTAACTATTTGAAATTCTCCAGACAATACTCTACGAGTGTAAATAT 77163 | || || ||| || || | || || || |||| | || | || ||| || | Sbjct 429186 TGAGAAGCCAAGGGTTGACAACCTGGAACTCGCCAGCGAGCACACGTCGCTGGTAGATGT 429245 Query 77164 TACTGGTATATGGTTCCACAGATTCATTGTTTCCCAAAATTTGAGCAGTAGAAGCAGTTG 77223 | ||| ||||| || | | || ||||| |||| || || | || || ||||| | Sbjct 429246 TGGAGGTGTATGGCTCGAAGCACTCGTTGTTGCCCAGGATCTGCGAGGTGGATGCAGTGG 429305 Query 77224 GCATAGGTGCCACCAATAAACTATTTCTGAGACCATGTGTTC-TGATTTTATCTTTTAGA 77282 |||| || |||| || || || || | || ||| || | | |||| || || || || Sbjct 429306 GCATTGGCGCCAGTAACAAGCTGTTGCGGACACC-GGTCTCCTTGATCTTGTCCTTGAGG 429364 Query 77283 TATTTCCAATCCCAAAG 77299 || ||| ||||| || Sbjct 429365 GCTTCCCAGTCCCAGAG 429381 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694648107553120