Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20ampelina_20[genbank_20GCA_5F001630405.1_202016-04-25] 904 sequences; 59,495,866 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq48 147 3e-30 seq56 116 4e-21 >seq48 Length=122101 Score = 147 bits (162), Expect = 3e-30 Identities = 380/577 (66%), Gaps = 4/577 (1%) Strand=Plus/Plus Query 53981 CCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATA 54040 |||||||| || | || ||||||| | ||| || |||| | || || || ||||| Sbjct 16654 CCAGGACACTCGTTAGGGCACATCAGGGTCCAGTCACCGTTCTTCTCGACCCGCTTCATG 16713 Query 54041 AAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCT 54100 || ||||| || ||||| || || | || ||||| | || || ||||| || || Sbjct 16714 AAAAGATCGGGGATCCAGAGGGCAAGGAAAAGATCACGGGCTCGGATCTCCTCCTTACCG 16773 Query 54101 GTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATG 54160 ||||| || || |||||| | | | ||| | ||||| || || | ||| || Sbjct 16774 TGGTTCTTGCGCAGGTCAAGGAACTCGAATACATCGGCGTGCCATGGCTCAAGGTAGATA 16833 Query 54161 GTCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAA 54220 | | | || || || ||||| || ||||| || | ||||| |||||||| || | Sbjct 16834 GCGAAGGCACCGGGACGCTTGTTGCCACCCTGGTCGACGTATCGGGCGGTGTTGTTGAAG 16893 Query 54221 ACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCA 54280 || | || |||||| |||| ||||| || | ||| || || || | ||| || || Sbjct 16894 ACCCGCAGCATTGGGGTAATGCCATTAGAGGTACCGTTAGTGCCAGCGATGTATGAGCCG 16953 Query 54281 CTGGCACGAATAT--TACTAATTGATAGACCTATCCCCCCTGCCATTTTAGAGATTAATG 54338 ||||||| || | | || | |||| || || || ||||| |||||||| | | Sbjct 16954 GTGGCACGGATGCGGTGCACGTTCA--GACCAATTCCACCCGCCATCTTAGAGATCATAG 17011 Query 54339 CGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAA 54398 | || ||||| || |||||||||||||| || || || ||| |||||| | || | Sbjct 17012 CACAAGTCTTTAAGGTGTCATAGATGCCCTCAATGCTGTCCTCCTTCATGTCGACGAGGA 17071 Query 54399 AACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCG 54458 | || |||| ||| | || ||| || ||||| || || || || || || || | Sbjct 17072 AGCATGATGACAGCTGGGGCTGAGGAGTGCCAGCATTGAACAATGTGGGGGAGGCATGTG 17131 Query 54459 TAAACCATTTTTCAGAAAGTAGATTGTACGTCTCGATAGCTGAGTCTATATCCCATTGAT 54518 | || | || | || | || ||||| ||||| || | || | ||| | Sbjct 17132 TGAAGAACTTGTTTGACATCAGGTTGTAGGTCTCAATGACCCTCTCGACATCGTCTCCCC 17191 Query 54519 GAATTCCTACTGCGACACGCATTAACATGTGCTGAGG 54555 || || || ||||||||||| | ||||||||| || Sbjct 17192 AGATACCGACAGCGACACGCATGATCATGTGCTGTGG 17228 >seq56 Length=117397 Score = 116 bits (128), Expect = 4e-21 Identities = 157/218 (72%), Gaps = 3/218 (1%) Strand=Plus/Plus Query 24126 AACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAA 24185 |||| | ||| ||||| ||| ||| |||||||| || | | ||| | |||||||| Sbjct 53332 AACAGGAGACAGGCGAAGTCGGTGTGCAGACCCTCATCACGAGAAATGAGCTCGTTGGAG 53391 Query 24186 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCA 24245 || || || || ||||| ||||||||||| || ||||| || ||||| || |||| || Sbjct 53392 AAGGTCAGGCCAGGCATGAGGCCACGCTTCTTGAGCCAGAAAATGGAGGCGAATGCGCCG 53451 Query 24246 GAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTTTCTCCATAACCGG---CG 24302 ||||| || || || || || || ||||||| |||| | |||| || || Sbjct 53452 CTGAAGAAGATGCCCTCGACGGCAGCGAAGGCAACCAGTCGCTGGGCATAGGTGGACTCG 53511 Query 24303 CTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTT 24340 | || || |||||||| ||||||| ||||||||||| Sbjct 53512 CGATCCTGGATCCACTTGAGAGCCCAGTCGGCCTTCTT 53549 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593714890945920