Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20ampelina_20[genbank_20GCA_5F001630405.1_202016-04-25] 904 sequences; 59,495,866 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq399 203 4e-47 >seq399 Length=33074 Score = 203 bits (224), Expect = 4e-47 Identities = 293/405 (72%), Gaps = 10/405 (2%) Strand=Plus/Plus Query 145866 CGCCACGTAGAACTG-GCACAGGAGGTGGCAGGGCGGCAGGGCCATGGCGGGCAGGTCCG 145924 || |||||| ||||| ||| | | |||||| |||||||| ||||| |||||| | Sbjct 2658 CGACACGTAAAACTGCGCAAAC-ATGTGGCACGGCGGCAGCGCCATCTTCTTCAGGTCGG 2716 Query 145925 CCGGGTTCCAGGCGGTGAGGACGAGCCTCCTGCTCTCGGGGTTCCTCTTGATCTCCCCTA 145984 |||||||||| ||| | | || | | || | | ||||| ||||| || | Sbjct 2717 CCGGGTTCCATGCGCTCATGATAATGCGCCGGTCGTGAGGGTTGTGCTTGAGCTTGTGGA 2776 Query 145985 TCAGGTCCCTGAGCTGGTCCACGCCCTGCCCCCGGTAATCTGTCTTGGAGTCCACGTACG 146044 ||| || |||||||| |||||||| ||| ||| || | ||||| ||| |||||| Sbjct 2777 TCACCTCGGCCAGCTGGTCGACGCCCTGGCCCGTGTAGTCGGCCTTGGCGTCGACGTACT 2836 Query 146045 CGGCCCCGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGCTCCCTGT 146104 | ||||| || |||| ||||||||||||||| ||||| || ||||| |||| || | || Sbjct 2837 CCGCCCCAAAATGCCGCCACTGGAACCCGTACACGGGGCCTAGGTCGCCGGCTTCACGGT 2896 Query 146105 GCCCCAGCCCGGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCTTGACGC 146164 | |||||||| | | | ||||| | || || ||||||||| |||||||||||||||||| Sbjct 2897 GGCCCAGCCCCACGCTGTCGAGGTACTCGCGAGACCCGTTGCCGTCCCAGATCTTGACGC 2956 Query 146165 CCCTCGCGGAGA-GCTCATTG--GA-GTCCGTGGACCCCCTGATGAACCAGAGCAGCTCT 146220 || | | |||| | || | || ||| |||| | ||||||||| ||||||||| Sbjct 2957 CCTGCTCTGAGAGGGACAGCGACGATGTC---TCACCCGC-GATGAACCACAGCAGCTCT 3012 Query 146221 TCGAGGACCCCCCTCCAGAAGACCCTCTTGGTGGTCAGCAGGGGG 146265 |||| || || | |||||| | ||| |||||||| || ||| Sbjct 3013 GCGAGAACGGCCTTTTGGAAGACGCGCTTTGTGGTCAGGAGCGGG 3057 Score = 138 bits (152), Expect = 1e-27 Identities = 221/316 (70%), Gaps = 5/316 (2%) Strand=Plus/Plus Query 145540 ACCGCCATCTCCATGGGGATGGCCGCGTGGGGGTGGTAGCCCTCCAGCGCAAAGTCCTCC 145599 |||| ||||| ||| | || | | ||| |||| || |||| || | ||||||||||| Sbjct 2263 ACCGACATCTTCATCGCAATCGTCTTGTGCGGGTTATACCCCTTCACCTCAAAGTCCTCC 2322 Query 145600 GCCCTGAAGTCATCTATGTCCTCCACCCGCCTCAGG----ATCCTGAGCCTGGGAAAGGG 145655 || | || | || ||| | || ||| ||| | ||| ||| ||| ||| Sbjct 2323 ACCTTCCAGCCGTCGATG-CTGCCGCCCTTCTCCCGCTTAATCTCCAGCTCGGGGAAGTC 2381 Query 145656 CCGGGGGCTCCTGGTCAGCTGGAGCTTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGC 145715 || || ||| |||||| | | ||| | || ||||||| || |||||||| Sbjct 2382 GCGCGGCTCCCTCTCCAGCTGCACCCGCAGCGCGTCGACGTGGTCTGCATACACGTGCGC 2441 Query 145716 GTCCCCCAGGACGTGGATGAAGTCCCCGGGCTCGAGGCCCGTGAGGTGGGCGACCATGTA 145775 ||| |||| |||||| | | | ||||| ||||| | | ||| |||| ||||| Sbjct 2442 GTCGCCCATGACGTGCGTCAGGCTGCCGGGGACGAGGTCGCACACGTGCGCGATCATGTG 2501 Query 145776 GGTCAGCAGGGAGTAGCTGGCTATGTTGAAGGGCACCCCCAGCCCCATGTCCCCCGAGCG 145835 |||||||| ||||||||||| |||||||| || || ||||| |||||||| | ||||| Sbjct 2502 CGTCAGCAGCGAGTAGCTGGCGATGTTGAAAGGGACGCCCAGGCCCATGTCGCAGGAGCG 2561 Query 145836 CTGGTACAGCTGGCAG 145851 |||||||||||||||| Sbjct 2562 CTGGTACAGCTGGCAG 2577 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590070132132160