Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20ampelina_20[genbank_20GCA_5F001630405.1_202016-04-25] 904 sequences; 59,495,866 total letters Query= NC_001875.2 Length=131995 Score E Sequences producing significant alignments: (Bits) Value seq427 113 4e-20 seq157 104 2e-17 >seq427 Length=29395 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || || | ||| |||| || | |||||| ||||| |||||||| ||||| | Sbjct 25468 CCACCACGGAGGCGGAGGACCAGGTGAAGAGTGGATTCCTTCTGAATGTTGTAGTCGGAG 25409 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 ||||| || ||||||| ||||| || || || | || || | ||||||||| ||| Sbjct 25408 AGGGTGCGGCCGTCCTCAAGCTGCTTTCCAGCGAAGATCAGACGCTGCTGGTCTGGGGGG 25349 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | || |||||||| |||||| || || | | ||| |||||| || ||| Sbjct 25348 ATACCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTATCAGAGGACTCGACC 25289 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || | ||||||||||||||| || | || ||||| || || ||||| Sbjct 25288 TCGAGGGTAATGGTCTTGCCAGTCAGAGTCTTGACGAAGATCTGCAT 25242 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || || | ||| || | ||| | || ||||||||||||||||| ||||| | Sbjct 25240 CCGCCACGAAGACGGAGGACGAGATGGAGGGTAGACTCCTTTTGAATGTTGTAGTCGGAG 25181 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 ||||| || ||||||| || || ||||| ||| | ||||| | ||||||||| ||| Sbjct 25180 AGGGTGCGGCCGTCCTCGAGTTGCTTGCCGGCAAAGATAAGACGCTGCTGGTCAGGGGGG 25121 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||| |||||||| |||||| || || | | ||| ||||| || ||| Sbjct 25120 ATGCCCTCCTTGTCTTGGATCTTGGACTTGACATTGTCGATGGTATCGGAGGACTCGACC 25061 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || | || ||||||||||| || | || || || || || ||||| Sbjct 25060 TCGAGCGTGATGGTCTTGCCTGTGAGGGTCTTCACGAAGATCTGCAT 25014 >seq157 Length=302622 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || ||||| | || |||| |||| ||||||||||| || ||||| ||||| | Sbjct 142247 CCACCACGCAGGCGCAGGACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAG 142306 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 ||||| || ||||||| ||||| ||||| || | || || | ||||||||| ||| Sbjct 142307 AGGGTACGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCTGGGGGA 142366 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | |||||||||||| |||||| || || | | ||| || || | |||| Sbjct 142367 ATGCCTTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCGGAAGACTCCACC 142426 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || | ||| || |||||||| || | || || || || || ||||| Sbjct 142427 TCAAGGGTGATAGTCTTGCCCGTGAGGGTCTTCACGAAGATCTGCAT 142473 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 422254547759264