Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20ampelina_20[genbank_20GCA_5F001630405.1_202016-04-25] 904 sequences; 59,495,866 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq357 100 6e-16 >seq357 Length=253780 Score = 100 bits (110), Expect = 6e-16 Identities = 262/398 (66%), Gaps = 20/398 (5%) Strand=Plus/Minus Query 254001 CTTCCTCATTTGCTTTTCCACGGTCCTCCCGGAACAGGCAAGACGTCAACCATCCTGGCG 254060 || ||||| |||| ||| |||| || ||||| || || |||||||| || ||||| || Sbjct 210442 CTCCCTCACATGCTCTTCTACGGCCCGCCCGGTACTGGAAAGACGTCCACAATCCTTGCT 210383 Query 254061 CTGGCCCGAACCCTGTTGGGCGAGGGGAACATGAGAGAGCGCGTGCTCGAGCTGAACGCT 254120 || ||| || | || | | | ||| | || || |||||||| || ||| Sbjct 210382 CTCGCCAAGGAGCTTTACGGTCCTGAGTTCGTGAAGCAACGTGTTCTCGAGCTCAATGCT 210323 Query 254121 TCTGACGAACGCGGGTTGGACGTCGTCCGCGACAAGATCAAG-ACTT------TCTCCAA 254173 |||||||||||||| | | |||| || || ||| ||||| |||| | | || Sbjct 210322 TCTGACGAACGCGGTATCTCCATCGTACGGGAGAAGGTCAAGGACTTCGCGCGTATGCA- 210264 Query 254174 GATGTCGATTTCGTCG------TTCCAACCCGGCTGTCCG------CCTTTCAAGCTCGT 254221 | || | | | | | | || || | | |||| || |||||| || | Sbjct 210263 GTTGACCAACCCACCCGCGGGCTACAAATCCCGTTATCCGTGCCCACCATTCAAGATCAT 210204 Query 254222 GATCCTGGACGAGGCGGACACCATGACGGCCGACGCGCAGTCCGCCCTCCGCCGAACGAT 254281 || ||||||||||| |||| |||||| || || || ||| |||||||| ||||| Sbjct 210203 CATTCTGGACGAGGCCGACAGCATGACACAGGATGCCCAAAGCGCGCTCCGCCGCACGAT 210144 Query 254282 GGAGACGCACTCCGTTGTGACGCGTTTTTGCCTGGTGTGCAACTACGTGTCGAAGATCAT 254341 ||| || || | | ||||| || ||||| | |||||||||||| || || || Sbjct 210143 GGAAACATACAGCAAGATTACGCGGTTCTGCCTCATCTGCAACTACGTGACGCGCATAAT 210084 Query 254342 CGCCCCGCTGGCTTCTCGGTGCGCCAAGTTTCGATTCA 254379 || ||| ||||| ||| ||| ||| || || |||| Sbjct 210083 CGACCCCCTGGCAAGTCGTTGCAGCAAATTCCGCTTCA 210046 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073753963100672