Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20ampelina_20[genbank_20GCA_5F001630405.1_202016-04-25] 904 sequences; 59,495,866 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq157 118 8e-22 seq427 116 3e-21 >seq157 Length=302622 Score = 118 bits (130), Expect = 8e-22 Identities = 154/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||| |||||| ||| ||||||||| |||||||||||| || || |||| || Sbjct 142265 ACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTACGGCCGTCCTCG 142324 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 || || || |||||||| |||| ||||| ||||| || || | || ||||||||| Sbjct 142325 AGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCTGGGGGAATGCCTTCCTTGTCCTGG 142384 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || || ||| || | | | |||| | ||||||||| | ||| || |||||| Sbjct 142385 ATCTTGGACTTGACATTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATAGTCTTG 142444 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCATGTTG 45340 ||||| || |||||||| ||||| |||||| || Sbjct 142445 CCCGTGAGGGTCTTCACGAAGATCTGCATGATG 142477 >seq427 Length=29395 Score = 116 bits (128), Expect = 3e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||| ||| || ||| ||||||||||||||||||||| || ||| |||| || Sbjct 25450 ACCAGGTGAAGAGTGGATTCCTTCTGAATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCA 25391 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 || || ||||| ||||| |||| ||||| ||||| || || | ||||||||||||| Sbjct 25390 AGCTGCTTTCCAGCGAAGATCAGACGCTGCTGGTCTGGGGGGATACCCTCCTTGTCCTGG 25331 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || || ||| || | | | | || ||| ||||| | |||||| |||||| Sbjct 25330 ATCTTGGACTTGACATTGTCGATGGTATCAGAGGACTCGACCTCGAGGGTAATGGTCTTG 25271 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 || ||||||||||| || ||||| ||||| Sbjct 25270 CCAGTCAGAGTCTTGACGAAGATCTGCAT 25242 Score = 89.7 bits (98), Expect = 4e-13 Identities = 150/214 (70%), Gaps = 10/214 (5%) Strand=Plus/Minus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCG----TC 45183 |||| ||||||||| ||||||||| ||||||||||| || | ||| || || Sbjct 25678 ACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTC----AGATAGCGTCCGGCCATC 25623 Query 45184 GTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTC 45243 |||| || || || ||||| || | ||||| ||||| || || | ||||||||||| Sbjct 25622 TTCCAACTGCTTGCCAGCGAAAATGAGACGCTGCTGGTCTGGTGGAATTCCCTCCTTGTC 25563 Query 45244 CGCAATTTTTTGCTTAACCGCCGCCACGC-TGTCCCCACCCTCCACCTCCACGGTAATCG 45302 | ||| || ||| || | | || | |||| ||| ||||| | || |||| Sbjct 25562 CTGAATCTTAGACTTCAC-GTTGTCAATCGTGTCTGATGACTCGACCTCAAGCGTGATCG 25504 Query 45303 TCTTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 |||||||||||| ||||| || || || ||||| Sbjct 25503 TCTTGCCCGTCAAGGTCTTGACGAAAATCTGCAT 25470 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395070847258984