Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20ampelina_20[genbank_20GCA_5F001630405.1_202016-04-25] 904 sequences; 59,495,866 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq56 122 2e-22 seq48 96.9 7e-15 >seq56 Length=117397 Score = 122 bits (134), Expect = 2e-22 Identities = 120/155 (77%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 101918 GTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCTGG 101977 |||||||| ||||| || || || |||||||| || || |||||||| |||||||||||| Sbjct 53486 GTTGCCTTCGCTGCCGTCGAGGGCATCTTCTTCAGCGGCGCATTCGCCTCCATTTTCTGG 53427 Query 101978 ATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGGAC 102037 ||||||| | || | ||||||| || |||| |||||| ||| |||||||| | || Sbjct 53426 CTCAAGAAGCGTGGCCTCATGCCTGGCCTGACCTTCTCCAACGAGCTCATTTCTCGTGAT 53367 Query 102038 GAAGGTCTTCATCGCGACTTTGCATGCATGCTGTT 102072 || ||||| || |||||| || || | ||||| Sbjct 53366 GAGGGTCTGCACACCGACTTCGCCTGTCTCCTGTT 53332 >seq48 Length=122101 Score = 96.9 bits (106), Expect = 7e-15 Identities = 177/254 (70%), Gaps = 4/254 (2%) Strand=Plus/Plus Query 94791 TCCTCCAGCAGTCTTGGAGATGATTGC-CGCCTCCTTAAGAGTATCATAAATACCCTCAA 94849 ||| || || |||| ||||| || || | || ||||| || ||||| || ||||||| Sbjct 16986 TCCACCCGCCATCTTAGAGATCATAGCACAAGTCTTTAAG-GTGTCATAGATGCCCTCAA 17044 Query 94850 TGCTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAGTTGGGG-TGTGACTGTTCCA 94908 |||| || || | | | | | |||||||| || || || ||||| || | || ||| Sbjct 17045 TGCTGTCCTCCTTCATGTCGACGAGGAAGCATGATGACAGCTGGGGCTGAG-GAGTGCCA 17103 Query 94909 CAATTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCCTCGACATGAGATCATATGTT 94968 ||| |||| ||||||||| ||||| || || | | | ||||| || | || || Sbjct 17104 GCATTGAACAATGTGGGGGAGGCATGTGTGAAGAACTTGTTTGACATCAGGTTGTAGGTC 17163 Query 94969 TCAATGACAGATTTGATGTCTGATCCGTGAATGCCGACAGCCACACGCATAATCATGTCC 95028 |||||||| | || || ||| || |||||||| |||||||| ||||||| | Sbjct 17164 TCAATGACCCTCTCGACATCGTCTCCCCAGATACCGACAGCGACACGCATGATCATGTGC 17223 Query 95029 TGAGGGCGCTCAAC 95042 || || ||||| || Sbjct 17224 TGTGGCCGCTCGAC 17237 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989572538143320