Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20ampelina_20[genbank_20GCA_5F001630405.1_202016-04-25] 904 sequences; 59,495,866 total letters Query= NC_003401.1 Length=133719 Score E Sequences producing significant alignments: (Bits) Value seq399 127 2e-24 >seq399 Length=33074 Score = 127 bits (140), Expect = 2e-24 Identities = 217/306 (71%), Gaps = 18/306 (6%) Strand=Plus/Plus Query 21110 CACGTAAAACTGACACAAA-ACGTGACAAGGAGGGAGAGCCATCCGCGCGAGGTCCGCGG 21168 |||||||||||| | |||| | ||| || || || || |||||| | ||||| || | Sbjct 2661 CACGTAAAACTG-CGCAAACATGTGGCACGGCGGCAGCGCCATCTTCTTCAGGTCGGCCG 2719 Query 21169 GGTTCCACGCGCACATAACGATGCGCCGATCGTGGGGCC---GCCTGTTAAT-TAGATCC 21224 ||||||| |||| ||| | |||||||| ||||| || || || | | |||| Sbjct 2720 GGTTCCATGCGCTCATGATAATGCGCCGGTCGTGAGGGTTGTGCTTGAGCTTGTGGATC- 2778 Query 21225 ACCACGTAACGCAGCTGGTCCACCCCCTGACCCTCGTAGTTGGCGTCGGCCCCCCTGTAC 21284 ||| || ||||||||| || ||||| ||| ||||| ||| | ||| | |||| Sbjct 2779 ACCTCGGC---CAGCTGGTCGACGCCCTGGCCCGTGTAGTCGGCCTTGGCGTCGACGTAC 2835 Query 21285 TCCGCCCCAAAATGTCTCCACTGGAACCCGTACACCGGCCCCAGATCGC---CCTCGCGG 21341 |||||||||||||| | |||||||||||||||||| || || || |||| | || ||| Sbjct 2836 TCCGCCCCAAAATGCCGCCACTGGAACCCGTACACGGGGCCTAGGTCGCCGGCTTCACGG 2895 Query 21342 CGGTCCCCGAAGCCCTGCGCCG-CCAAAAAGGCGCGGGACCCGTGCGCGTCCCAAATTTT 21400 || || ||||| ||| | | | | |||| ||||||| ||||||| || || Sbjct 2896 TGGCCC----AGCCCCACGCTGTCGAGGTACTCGCGAGACCCGTTGCCGTCCCAGATCTT 2951 Query 21401 TACGCC 21406 ||||| Sbjct 2952 GACGCC 2957 Score = 120 bits (132), Expect = 3e-22 Identities = 161/219 (74%), Gaps = 4/219 (2%) Strand=Plus/Plus Query 20876 AATCTTCAGC-CGCGGAAACGGACGCGGGGTCCTCCGCAGCTGAAGCAGCAGGGGATCAA 20934 ||||| |||| || |||| | ||||| |||| |||||| | | |||| | || | Sbjct 2361 AATCTCCAGCTCGGGGAAGTCG-CGCGGCTCCCTCTCCAGCTGCACCCGCAGCGCGTCGA 2419 Query 20935 CGTGGTTGTTGTAAACGTGGGCGTCACCCAAGGTGTGCACAAAGTCTCCCGGGGTC-AGG 20993 |||||| || ||||| ||||| |||| | |||| | | || |||||| | ||| Sbjct 2420 CGTGGTCTGCATACACGTGCGCGTCGCCCATGACGTGCGTCAGG-CTGCCGGGGACGAGG 2478 Query 20994 CCCGTGACGTGAGCGATCAGATACGTCAGGAGGGCGTAGCTGGCGATGTTAAACGGGACC 21053 | ||||| ||||||| | |||||| || | ||||||||||||||| || ||||| Sbjct 2479 TCGCACACGTGCGCGATCATGTGCGTCAGCAGCGAGTAGCTGGCGATGTTGAAAGGGACG 2538 Query 21054 CCGAGGCCCATGTCGGCGGACCTCTGGTACAGCTGGCAG 21092 || |||||||||||| ||| | |||||||||||||||| Sbjct 2539 CCCAGGCCCATGTCGCAGGAGCGCTGGTACAGCTGGCAG 2577 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427771286977920