Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20ampelina_20[genbank_20GCA_5F001630405.1_202016-04-25] 904 sequences; 59,495,866 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq157 91.5 1e-13 seq427 86.0 6e-12 >seq157 Length=302622 Score = 91.5 bits (100), Expect = 1e-13 Identities = 149/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 139550 CGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAG 139609 |||| || | ||| | || ||||| || || ||||| || ||| | || | | Sbjct 142259 CGCAGGACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTACGGCCG 142318 Query 139610 TCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTG 139669 || |||||||| || || || |||||||||| ||||| || || || |||||||| ||| Sbjct 142319 TCCTCGAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCTGGGGGAATGCCTTCCTTG 142378 Query 139670 TCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACC 139729 || ||| || || | | || | ||||||| | ||||||||||| ||| | Sbjct 142379 TCCTGGATCTTGGACTTGACATTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATA 142438 Query 139730 GTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 |||||||| || | || || ||||| || ||||| Sbjct 142439 GTCTTGCCCGTGAGGGTCTTCACGAAGATCTGCAT 142473 >seq427 Length=29395 Score = 86.0 bits (94), Expect = 6e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 139568 GTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGTTTACCA 139627 |||||||| ||||||||||| || ||| | |||| ||| ||||| || || || Sbjct 25210 GTAGACTCCTTTTGAATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCGAGTTGCTTGCCG 25151 Query 139628 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTGTTTT 139687 ||| |||| ||||| ||||| || || || ||||| || ||||| ||| || || Sbjct 25150 GCAAAGATAAGACGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCTTGGATCTTGGACTTG 25091 Query 139688 AGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTCAACGTT 139747 | | || | || |||| || ||| ||||| | || | |||||||| || | || Sbjct 25090 ACATTGTCGATGGTATCGGAGGACTCGACCTCGAGCGTGATGGTCTTGCCTGTGAGGGTC 25031 Query 139748 TTTACGAATATTTGCAT 139764 || ||||| || ||||| Sbjct 25030 TTCACGAAGATCTGCAT 25014 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496058394476800