Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20ampelina_20[genbank_20GCA_5F001630405.1_202016-04-25] 904 sequences; 59,495,866 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq48 179 5e-40 seq56 143 4e-29 >seq48 Length=122101 Score = 179 bits (198), Expect = 5e-40 Identities = 387/577 (67%), Gaps = 4/577 (1%) Strand=Plus/Plus Query 79891 CCAGGACATTCGTCAGGACACATCAACGACCACTCTCCATCATCCTTTACTCGTTTCATA 79950 |||||||| |||| ||| ||||||| | ||| || || | | || || || ||||| Sbjct 16654 CCAGGACACTCGTTAGGGCACATCAGGGTCCAGTCACCGTTCTTCTCGACCCGCTTCATG 16713 Query 79951 AAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCT 80010 || ||||| || ||||| || || | || ||||| | || || |||||| || || Sbjct 16714 AAAAGATCGGGGATCCAGAGGGCAAGGAAAAGATCACGGGCTCGGATCTCCTCCTTACCG 16773 Query 80011 GTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATG 80070 ||||| || || |||||| | | | ||| | ||||| || || | ||| || Sbjct 16774 TGGTTCTTGCGCAGGTCAAGGAACTCGAATACATCGGCGTGCCATGGCTCAAGGTAGATA 16833 Query 80071 GCCATAACTCCCGGTCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAA 80130 || | | || || || ||||| || ||||| || | ||||| |||||||| || | Sbjct 16834 GCGAAGGCACCGGGACGCTTGTTGCCACCCTGGTCGACGTATCGGGCGGTGTTGTTGAAG 16893 Query 80131 ACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCA 80190 || | || |||||| |||| ||||| || ||||| || || || | ||| || || Sbjct 16894 ACCCGCAGCATTGGGGTAATGCCATTAGAGGTACCGTTAGTGCCAGCGATGTATGAGCCG 16953 Query 80191 CTGGCACGAATAT--TACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATG 80248 ||||||| || | | || | |||| ||||| || ||||| |||||||| | | Sbjct 16954 GTGGCACGGATGCGGTGCACGTTCA--GACCAATTCCACCCGCCATCTTAGAGATCATAG 17011 Query 80249 CGCATCGTTTTAACGTATCATAGATGCCCTCTATGCTATCATCAATCATGTTAAGTAGAA 80308 | || ||||| || |||||||||||||| ||||| || || |||||| | || | Sbjct 17012 CACAAGTCTTTAAGGTGTCATAGATGCCCTCAATGCTGTCCTCCTTCATGTCGACGAGGA 17071 Query 80309 AACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCG 80368 | || |||| ||| | || ||| || ||||| || || || || || || || | Sbjct 17072 AGCATGATGACAGCTGGGGCTGAGGAGTGCCAGCATTGAACAATGTGGGGGAGGCATGTG 17131 Query 80369 TAAACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTATATCCCATTGAT 80428 | || | || | |||| || ||||| |||||||| | || | ||| | Sbjct 17132 TGAAGAACTTGTTTGACATCAGGTTGTAGGTCTCAATGACCCTCTCGACATCGTCTCCCC 17191 Query 80429 GAATTCCTACCGCGACACGCATTAACATGTGCTGAGG 80465 || || || ||||||||||| | ||||||||| || Sbjct 17192 AGATACCGACAGCGACACGCATGATCATGTGCTGTGG 17228 Score = 113 bits (124), Expect = 6e-20 Identities = 362/556 (65%), Gaps = 7/556 (1%) Strand=Plus/Plus Query 78706 TCCTTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATT 78765 |||| ||| | ||||| || ||||| |||| || | | || || || |||||||| Sbjct 15460 TCCTGGTCGACAGTGAACTGGATGGGTGCGGCAGCTGCCTGAGTGCGGAGGTAGTACATG 15519 Query 78766 CCCGTTTTTAGACCGAGACTCCATCCGTAGAAATGCATACTCGTTAGTTTGGA-ATAACT 78824 || || || |||||||| |||| ||| ||| ||||| || || | ||| || | Sbjct 15520 CCAGTCTTGAGACCGAGCTTCCAGCCGGCGAAGTGCATGCTGGTGATCTTGCCCATGGAT 15579 Query 78825 CGGATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGC 78884 || || || ||||| || | ||| ||| ||||| |||||||| || | ||| || Sbjct 15580 -GGCTCCCTCATGTGGATGTTGAGAGACTGAGACTGATCAATGAAGGCACCACGGTCAGC 15638 Query 78885 AGCCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAAT 78944 |||||| | | || ||| | || | || ||||| | || || || | ||| || Sbjct 15639 AGCCATCTGCACAATGGTCCTCTGAGAGATCTCCCAGACGGTCTTGTAGAGGGCCTTGAT 15698 Query 78945 ATCTTCTGGAAGGTTTGTA---TTCTGAATGGATCCACCATCTGCCATAATCCTATTCTT 79001 ||| | || | | | | | ||||||||||| ||| | || || || || | ||||| Sbjct 15699 ATCAGCCGGGATGCTAGGAATGTTCTGAATGGAACCATCCTCGGCGATGATACGGTTCTT 15758 Query 79002 GATCTCTTCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTAC 79061 || | ||| ||| || ||| || | | | || ||||| || || || || Sbjct 15759 CATGGCCTCAGACCACAAGCCGAGCTCTGTCAGATCCCTGAGGAGCCAAGGGTTGACGAC 15818 Query 79062 TTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATATGGTTCCACCGA 79121 || || || |||| | || | || ||| || || ||| ||||| || | | Sbjct 15819 CTGGAACTCGCCAGCGAGCACACGTCGCTGGTAGATGTTGGAGGTGTATGGCTCAAAGCA 15878 Query 79122 TTCATTATTTCCCAAAATTTGAGCAGTTGATGCCGTTGGCATAGGTGCCACCAATAAACT 79181 ||||| || |||| || || | || || || || ||||| ||||||| ||| | || Sbjct 15879 CTCATTGTTGCCCAGGATCTGCGACGTCGACGCAGTGGGCATTGGTGCCAGCAACAGGCT 15938 Query 79182 ATTTCTAAGACC-GTATGATCTGATTTTATCTTTTAGAGATTCCCAATCCCAAAGATCAG 79240 || | || ||| || | | |||| || || || || | ||||| ||||| || || | Sbjct 15939 GTTGCGAACACCAGTCTCCT-TGATCTTCTCCTTGAGCGCATCCCAGTCCCAGAGGTCGG 15997 Query 79241 ACGGGACAACATTCCA 79256 | || |||||||| Sbjct 15998 AGGGCTTGACATTCCA 16013 >seq56 Length=117397 Score = 143 bits (158), Expect = 4e-29 Identities = 163/218 (75%), Gaps = 3/218 (1%) Strand=Plus/Plus Query 49951 AACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAA 50010 |||| | ||| ||||| ||| |||||||||||| || | | ||| || |||||||| Sbjct 53332 AACAGGAGACAGGCGAAGTCGGTGTGCAGACCCTCATCACGAGAAATGAGCTCGTTGGAG 53391 Query 50011 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCA 50070 || || || || ||||| ||||||||||| || ||||| || ||||| || |||| || Sbjct 53392 AAGGTCAGGCCAGGCATGAGGCCACGCTTCTTGAGCCAGAAAATGGAGGCGAATGCGCCG 53451 Query 50071 GAAAAGAAGATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGG---CG 50127 |||||||| || || || || || |||||||| |||| || |||| ||| || Sbjct 53452 CTGAAGAAGATGCCCTCGACGGCAGCGAAGGCAACCAGTCGCTGGGCATAGGTGGACTCG 53511 Query 50128 CTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTT 50165 | || || |||||||| ||||||| ||||||||||| Sbjct 53512 CGATCCTGGATCCACTTGAGAGCCCAGTCGGCCTTCTT 53549 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718260683562560