Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20ampelina_20[genbank_20GCA_5F001630405.1_202016-04-25] 904 sequences; 59,495,866 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq56 140 5e-28 seq48 138 2e-27 >seq56 Length=117397 Score = 140 bits (154), Expect = 5e-28 Identities = 203/287 (71%), Gaps = 0/287 (0%) Strand=Plus/Minus Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078 || ||| | |||||||| ||| | || ||||| ||||| | ||| ||| ||||||| Sbjct 53955 ATCTGGCAGATGTACAAGAAGCACGAAGCTTCCTTCTGGACTGCCGAGGAGATCGATCTC 53896 Query 125079 TCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCG 125138 |||||||||||| |||| ||| | || |||| || |||||| | || | || Sbjct 53895 TCCAAGGACCTGCACGACTGGAGCAACCGCCTGACCGACGACGAGCGATACTTCGTCTCC 53836 Query 125139 CACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCTGTTGACACGA 125198 ||||| | |||||||| || | || ||||||||||||||||| || ||| || || Sbjct 53835 CACATCCTCGCCTTCTTCGCTGCTTCAGATGGAATCGTCAACGAGAACCTGGTGGAGCGC 53776 Query 125199 TTCTCTCAAGAGTTGACCATTCCAGAGGTGTCGTGCTTTTACGGATTCCAAATCATGATT 125258 ||| ||| | || ||||||| | ||||| ||||| ||||| |||||||| Sbjct 53775 TTCAGCGGCGAGGTTCAGATCCCAGAGGCGCGCTGCTTCTACGGCTTCCAGATCATGATG 53716 Query 125259 GAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACAT 125305 |||||| | ||||| || | |||||| || || |||| ||||| Sbjct 53715 GAGAACATCCACTCTGAGACGTACTCGCTGCTCATCGACACCTACAT 53669 Score = 131 bits (144), Expect = 2e-25 Identities = 341/512 (67%), Gaps = 25/512 (5%) Strand=Plus/Minus Query 125352 GTGCCGTCTATACGTAAAAAGGCTCAATGGGTGATTCGGTGGATCGATGACGACAAGTCT 125411 || |||| || || || ||||| | |||| | ||||||| | || | |||| Sbjct 53564 GTCCCGTGCATCCGCAAGAAGGCCGACTGGGCTCTCAAGTGGATCCAGGATCGCGAGTCC 53505 Query 125412 TCGTACGCCGACAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGT 125471 | || ||| | ||||||| || ||||| ||||| |||||||||||||| || Sbjct 53504 ACCTATGCCCAGCGACTGGTTGCCTTCGCTGCCGTCGAGGGCATCTTCTTCAGCGGCGCA 53445 Query 125472 TTTGCGGCCATCTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAAC 125531 || || |||| || |||||||||||||| || |||||||| || ||||| | ||| Sbjct 53444 TTCGCCTCCATTTTCTGGCTCAAGAAGCGTGGCCTCATGCCTGGCCTGACCTTCTCCAAC 53385 Query 125532 GAGTTTATATCTCGAGACGAGGGCCTACACTGTGACTTTGCCATTCTACTGTT-TCGCAA 125590 ||| | || ||||| || ||||| || ||| ||||| ||| ||| ||||| || || Sbjct 53384 GAGCTCATTTCTCGTGATGAGGGTCTGCACACCGACTTCGCCTGTCTCCTGTTCTCTCAC 53325 Query 125591 CT----ATCTGCGTCCCGAGTGCAGATCCAGCGATGAAAAGGTCATCAACATTGTAACCG 125646 || | | ||| || || | ||||| || ||| ||||| | |||| Sbjct 53324 CTGAGGAAC--CGT-CCAAG----CAAGCAGCG-TGTCGAGGACATCA------TCACCG 53279 Query 125647 ATGCCGTGAGGATAGAACAAGAGTTTCTAACCGAATCCCTACCGGTCAGCATGATTGGCA 125706 | ||||| || || | ||||| | || || | || || | | | | |||| Sbjct 53278 AGGCCGTCGCCATCGAGAAGGAGTTCTTGACTGAGGCTCTGCCATGCGCCCTCCTCGGCA 53219 Query 125707 TGAACTGCAAGCTAATGTGCGAGTACATAGAGTTTGTGGCAGATCGTCTACTGTACGAGT 125766 |||||| ||| || ||| ||||||| |||||||| || || ||||| ||| || Sbjct 53218 TGAACTCCAACCTCATGAAGCAGTACATCGAGTTTGTTGCCGACCGTCTCCTGGTCGCTC 53159 Query 125767 TGATTGGC--CG-CAAGATTTACAACGCCAAGAATCCCTTTGATTTCATGACCAGCATAT 125823 || ||| || ||| ||||||| | ||| ||||| || |||||| | ||| | Sbjct 53158 TG---GGCAACGAGAAGGTTTACAAGTCGTCGAACCCCTTCGACTTCATGGAGAACATCT 53102 Query 125824 CACTAGAGGGTAAGACCAACTTTTTCGAGAAG 125855 | || | || ||||||||||| || |||||| Sbjct 53101 CTCTCGGTGGCAAGACCAACTTCTTTGAGAAG 53070 >seq48 Length=122101 Score = 138 bits (152), Expect = 2e-27 Identities = 310/461 (67%), Gaps = 10/461 (2%) Strand=Plus/Minus Query 96864 CGATACGTTACACAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCT 96923 |||||||| ||||| ||||| || || || || || | || ||||| | || || Sbjct 16877 CGATACGTCGACCAGGGTGGCAACAAGCGTCCCGGTGCCTTCGCTATCTACCTTGAGCCA 16818 Query 96924 TGGCACGCGGACGTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCA 96983 |||||||| || || || || || | || ||||||| ||| || || ||| Sbjct 16817 TGGCACGCCGATGTATTCGAGTTCCTTGACCTGCGCAAGAACCACGGTAAGGAGGAGATC 16758 Query 96984 CGAGCCAGGGACTTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTC--- 97040 |||||| | || | || ||| |||||| | || ||| | ||||||||||| ||| Sbjct 16757 CGAGCCCGTGATCTTTTCCTTGCCCTCTGGATCCCCGATCTTTTCATGAAGCGGGTCGAG 16698 Query 97041 AACGACGGTGGCTACTGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGC 97100 || |||||| |||||| ||| |||||||| || || || || || |||| ||| Sbjct 16697 AAGAACGGTG---ACTGGACCCTGATGTGCCCTAACGAGTGTCCTGGCCTCGCCGACTGC 16641 Query 97101 TGGGGCGAAGAGTTTGAGGCCAAGTACACGGCCTACGAGCAAGAGGGCCG-ATACGTGAG 97159 | || || ||||||||||| ||| | |||||| | ||||| || || || Sbjct 16640 TACGGTGAGGAGTTTGAGGCTCTCTACGAGCAGTACGAGAAGGAGGGTCGTGGTCGCAAG 16581 Query 97160 ACGAGTCGATGCACGAGAA-CTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAA 97218 || | || | | |||| |||||| | ||||| | ||||||| |||||||| | Sbjct 16580 ACCA--TGAAGGCCCAGAAGCTGTGGTATGCCATTCTCGAGGCTCAGACTGAGACTGGCA 16523 Query 97219 CTCCGTACATTCTCTACAAGGATACCGTGAATCGCAACAGCAACCAACGCCACTTGGGCA 97278 || | ||| || |||||||| || || || || |||||||| || |||| | Sbjct 16522 ACCCCTTCATGCTGTACAAGGACCACGCCAACCGGAAGAGCAACCAGAAGAACCTGGGTA 16463 Query 97279 CCATCAAGGGCTCCAATCTGTGCACGGAAATTGTAGAGTAC 97319 ||||| ||||||| || ||||| || || | |||||| Sbjct 16462 CCATCCGAAGCTCCAACCTTTGCACTGAGATCATTGAGTAC 16422 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741050826031040