Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20ampelina_20[genbank_20GCA_5F001630405.1_202016-04-25] 904 sequences; 59,495,866 total letters Query= NC_005832.1 Length=106332 Score E Sequences producing significant alignments: (Bits) Value seq399 111 1e-19 >seq399 Length=33074 Score = 111 bits (122), Expect = 1e-19 Identities = 256/378 (68%), Gaps = 22/378 (6%) Strand=Plus/Plus Query 25611 CACGTAAAACTG---ACACATGGTGTAGCACGGAGGAAGAGCTATAAGGCCCAAGTCTTT 25667 |||||||||||| | ||||| | |||||| || || || || || ||| Sbjct 2661 CACGTAAAACTGCGCAAACATG---TGGCACGGCGGCAGCGCCATCTTCTTCAGGTCGGC 2717 Query 25668 AGGGTTCCAGGCGCACACGATGATGCACCTGTCTTCTGGGTTGTCCCTGATAA----GAT 25723 |||||||| |||| || ||| |||| || ||| | ||||||| | ||| ||| Sbjct 2718 CGGGTTCCATGCGCTCATGATAATGCGCCGGTCGTGAGGGTTGTGCTTGAGCTTGTGGAT 2777 Query 25724 C--CGCGGTGTTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCATGTCCGT 25781 | | ||| |||||| || || ||| |||| |||||| ||| | ||| Sbjct 2778 CACCTCGGC------CAGCTGGTCGACGCCCTGGCCCGTGTAGTCGGCCTTGGCGTCGAC 2831 Query 25782 GTACTCTGCTCCGAAATACCTCCACTGGAACCCGTACACCGGTCCTAGGTCTCCATCTTC 25841 |||||| || || |||| || |||||||||||||||||| || |||||||| || |||| Sbjct 2832 GTACTCCGCCCCAAAATGCCGCCACTGGAACCCGTACACGGGGCCTAGGTCGCCGGCTTC 2891 Query 25842 CCTGTGCTCAAAGCCCCTC-TTATCCAAAAAGTCTCTGGAACCATTGGCGTCCCAGATCT 25900 | ||| | |||||| | | || | | || | || || ||| |||||||||||| Sbjct 2892 ACGGTG-GCCCAGCCCCACGCTGTCGAGGTACTCGCGAGACCCGTTGCCGTCCCAGATCT 2950 Query 25901 TTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGT-GGACCCTCTGACGAACCACAGCAGC 25959 | || |||| ||| ||||| || ||| |||| | || ||||||||||||| Sbjct 2951 TGACGCCCTGCTCTGAGAGGGACAGCGACGATGTCTCACCCGC-GATGAACCACAGCAGC 3009 Query 25960 TCCGCCGTGACGGCCTTT 25977 || || ||||||||| Sbjct 3010 TCTGCGAGAACGGCCTTT 3027 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 340133852533992