Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Diaporthe_20ampelina_20[genbank_20GCA_5F001630405.1_202016-04-25]
904 sequences; 59,495,866 total letters
Query= NC_005832.1
Length=106332
Score E
Sequences producing significant alignments: (Bits) Value
seq399 111 1e-19
>seq399
Length=33074
Score = 111 bits (122), Expect = 1e-19
Identities = 256/378 (68%), Gaps = 22/378 (6%)
Strand=Plus/Plus
Query 25611 CACGTAAAACTG---ACACATGGTGTAGCACGGAGGAAGAGCTATAAGGCCCAAGTCTTT 25667
|||||||||||| | ||||| | |||||| || || || || || |||
Sbjct 2661 CACGTAAAACTGCGCAAACATG---TGGCACGGCGGCAGCGCCATCTTCTTCAGGTCGGC 2717
Query 25668 AGGGTTCCAGGCGCACACGATGATGCACCTGTCTTCTGGGTTGTCCCTGATAA----GAT 25723
|||||||| |||| || ||| |||| || ||| | ||||||| | ||| |||
Sbjct 2718 CGGGTTCCATGCGCTCATGATAATGCGCCGGTCGTGAGGGTTGTGCTTGAGCTTGTGGAT 2777
Query 25724 C--CGCGGTGTTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCATGTCCGT 25781
| | ||| |||||| || || ||| |||| |||||| ||| | |||
Sbjct 2778 CACCTCGGC------CAGCTGGTCGACGCCCTGGCCCGTGTAGTCGGCCTTGGCGTCGAC 2831
Query 25782 GTACTCTGCTCCGAAATACCTCCACTGGAACCCGTACACCGGTCCTAGGTCTCCATCTTC 25841
|||||| || || |||| || |||||||||||||||||| || |||||||| || ||||
Sbjct 2832 GTACTCCGCCCCAAAATGCCGCCACTGGAACCCGTACACGGGGCCTAGGTCGCCGGCTTC 2891
Query 25842 CCTGTGCTCAAAGCCCCTC-TTATCCAAAAAGTCTCTGGAACCATTGGCGTCCCAGATCT 25900
| ||| | |||||| | | || | | || | || || ||| ||||||||||||
Sbjct 2892 ACGGTG-GCCCAGCCCCACGCTGTCGAGGTACTCGCGAGACCCGTTGCCGTCCCAGATCT 2950
Query 25901 TTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGT-GGACCCTCTGACGAACCACAGCAGC 25959
| || |||| ||| ||||| || ||| |||| | || |||||||||||||
Sbjct 2951 TGACGCCCTGCTCTGAGAGGGACAGCGACGATGTCTCACCCGC-GATGAACCACAGCAGC 3009
Query 25960 TCCGCCGTGACGGCCTTT 25977
|| || |||||||||
Sbjct 3010 TCTGCGAGAACGGCCTTT 3027
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 340133852533992
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |