Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20ampelina_20[genbank_20GCA_5F001630405.1_202016-04-25] 904 sequences; 59,495,866 total letters Query= NC_005839.2 Length=131680 Score E Sequences producing significant alignments: (Bits) Value seq427 84.2 2e-11 >seq427 Length=29395 Score = 84.2 bits (92), Expect = 2e-11 Identities = 138/199 (69%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 48535 CTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTA 48594 |||||||||||||||||| || | | || ||||||| || ||||| ||| | | Sbjct 25205 CTCCTTTTGAATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCGAGTTGCTTGCCGGCAAA 25146 Query 48595 AATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTCTGCTTGATAGA 48654 || | ||||||||| || || | | |||||||| || || ||||| | Sbjct 25145 GATAAGACGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCTTGGATCTTGGACTTGACATT 25086 Query 48655 CGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCAC 48714 | |||||||||| ||||| ||||| || ||||| || || ||||| || ||||| Sbjct 25085 GTCGATGGTATCGGAGGACTCGACCTCGAGCGTGATGGTCTTGCCTGTGAGGGTCTTCAC 25026 Query 48715 AAAAATCTGCATCGTGTCT 48733 || |||||||| ||| || Sbjct 25025 GAAGATCTGCATGGTGGCT 25007 Score = 82.4 bits (90), Expect = 6e-11 Identities = 140/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 48524 TGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTGC 48583 ||||| ||| ||||| ||||||||||| || | | || ||||||| |||||| Sbjct 25444 TGAAGAGTGGATTCCTTCTGAATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCAAGCTGC 25385 Query 48584 TTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTC 48643 || || || | || | ||||||||| || || | || ||||||||| || || Sbjct 25384 TTTCCAGCGAAGATCAGACGCTGCTGGTCTGGGGGGATACCCTCCTTGTCCTGGATCTTG 25325 Query 48644 TGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGTG 48703 ||||| | | |||||||| | ||||| ||||| || ||||| || || || Sbjct 25324 GACTTGACATTGTCGATGGTATCAGAGGACTCGACCTCGAGGGTAATGGTCTTGCCAGTC 25265 Query 48704 AGAGTTTTCACAAAAATCTGCAT 48726 ||||| || || || |||||||| Sbjct 25264 AGAGTCTTGACGAAGATCTGCAT 25242 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421246558864904