Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20ampelina_20[genbank_20GCA_5F001630405.1_202016-04-25] 904 sequences; 59,495,866 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq538 116 6e-22 >seq538 Length=18565 Score = 116 bits (128), Expect = 6e-22 Identities = 88/101 (87%), Gaps = 2/101 (2%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGC-AGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 ||||||||||| ||| |||| |||||| || |||||||| || ||||||||||| ||||| Sbjct 8746 GCTAAGCGTCACCGCAAGAT-TCTTCGTGACAACATCCAGGGTATCACCAAGCCCGCTAT 8804 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTG 16532 ||| ||||| || ||||||||||| ||||||||| |||||| Sbjct 8805 CCGACGTCTCGCCCGTCGTGGTGGTGTCAAGCGTATCTCTG 8845 Score = 91.5 bits (100), Expect = 2e-14 Identities = 128/180 (71%), Gaps = 0/180 (0%) Strand=Plus/Plus Query 16529 TCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATC 16588 |||| | || |||| || |||| || || | ||| ||||||| || ||| ||| Sbjct 8909 TCTGTAGTGATCTACGAGGAGACCCGCTCCGTCCTCAAGTCCTTCCTCGAGGGCGTCATC 8968 Query 16589 CATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCTCCATGGATATC 16648 | ||| ||| || ||| ||||||||||| || || ||||| ||||| || |||| || Sbjct 8969 CGTGACGCTGTCACCTACACCGAGCACGCCAAGCGCAAGACCGTCACATCTCTGGACGTC 9028 Query 16649 GTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGAAGTTAATCTTCTAAT 16708 ||||| || |||| || |||||||| | | || ||||| || ||||| | ||| || Sbjct 9029 GTCTACGCCCTGAAGCGACAAGGCCGCACTCTGTACGGTTTCGGTGGTTAAACATCTCAT 9088 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79074373466472