Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20ampelina_20[genbank_20GCA_5F001630405.1_202016-04-25] 904 sequences; 59,495,866 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq48 156 5e-33 seq56 143 3e-29 >seq48 Length=122101 Score = 156 bits (172), Expect = 5e-33 Identities = 382/577 (66%), Gaps = 4/577 (1%) Strand=Plus/Plus Query 63168 CCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATA 63227 |||||||| || | || ||||||| | ||| || |||| | || || || ||||| Sbjct 16654 CCAGGACACTCGTTAGGGCACATCAGGGTCCAGTCACCGTTCTTCTCGACCCGCTTCATG 16713 Query 63228 AAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCT 63287 || ||||| || ||||| || || | || ||||| | || || ||||| || || Sbjct 16714 AAAAGATCGGGGATCCAGAGGGCAAGGAAAAGATCACGGGCTCGGATCTCCTCCTTACCG 16773 Query 63288 GTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATG 63347 ||||| || || |||||| | | | ||| | ||||| || || | ||| || Sbjct 16774 TGGTTCTTGCGCAGGTCAAGGAACTCGAATACATCGGCGTGCCATGGCTCAAGGTAGATA 16833 Query 63348 GCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAA 63407 || | | || || || ||||| || ||||| || | ||||| |||||||| || | Sbjct 16834 GCGAAGGCACCGGGACGCTTGTTGCCACCCTGGTCGACGTATCGGGCGGTGTTGTTGAAG 16893 Query 63408 ACTCTCAACATTGGAATAATACCGTTTGATATACCATTGGTACCGGAGATATAGCTTCCA 63467 || | || |||||| |||| || || || |||| || || || | ||| || || Sbjct 16894 ACCCGCAGCATTGGGGTAATGCCATTAGAGGTACCGTTAGTGCCAGCGATGTATGAGCCG 16953 Query 63468 CTGGCACGAATAT--TACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATG 63525 ||||||| || | | || | |||| ||||| || ||||| |||||||| | | Sbjct 16954 GTGGCACGGATGCGGTGCACGTTCA--GACCAATTCCACCCGCCATCTTAGAGATCATAG 17011 Query 63526 CGCATCGTTTTAACGTGTCATAGATACCCTCTATGCTATCATCGATCATGTTAAGTAGAA 63585 | || ||||| ||||||||||| ||||| ||||| || || |||||| | || | Sbjct 17012 CACAAGTCTTTAAGGTGTCATAGATGCCCTCAATGCTGTCCTCCTTCATGTCGACGAGGA 17071 Query 63586 AACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCG 63645 | || |||| ||| | || ||| || ||||| || || || || || || || | Sbjct 17072 AGCATGATGACAGCTGGGGCTGAGGAGTGCCAGCATTGAACAATGTGGGGGAGGCATGTG 17131 Query 63646 TAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGAT 63705 | || | || | || | || ||||| |||||||| | || | ||| | Sbjct 17132 TGAAGAACTTGTTTGACATCAGGTTGTAGGTCTCAATGACCCTCTCGACATCGTCTCCCC 17191 Query 63706 GAATTCCTACTGCGACACGCATTAACATGTGCTGAGG 63742 || || || ||||||||||| | ||||||||| || Sbjct 17192 AGATACCGACAGCGACACGCATGATCATGTGCTGTGG 17228 Score = 104 bits (114), Expect = 3e-17 Identities = 353/544 (65%), Gaps = 7/544 (1%) Strand=Plus/Plus Query 61983 TCCTTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATT 62042 |||| ||| | ||||| || ||||| |||| || | | || || || |||||||| Sbjct 15460 TCCTGGTCGACAGTGAACTGGATGGGTGCGGCAGCTGCCTGAGTGCGGAGGTAGTACATG 15519 Query 62043 CCCGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGA-ATAACT 62101 || || || |||||||| |||| ||| || ||||| || || | ||| || | Sbjct 15520 CCAGTCTTGAGACCGAGCTTCCAGCCGGCGAAGTGCATGCTGGTGATCTTGCCCATGGAT 15579 Query 62102 CGGATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGC 62161 || || || ||||| || | ||| ||| ||||| |||||||| || | ||| || Sbjct 15580 -GGCTCCCTCATGTGGATGTTGAGAGACTGAGACTGATCAATGAAGGCACCACGGTCAGC 15638 Query 62162 AGCCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAAT 62221 |||||| | | || ||| | || | || ||||| | || || || | ||| || Sbjct 15639 AGCCATCTGCACAATGGTCCTCTGAGAGATCTCCCAGACGGTCTTGTAGAGGGCCTTGAT 15698 Query 62222 ATCTTCTGGAAGGTTTGTA---TTCTGAATGGATCCACCATCTGCCATAATCCTATTCTT 62278 ||| | || | | | | | ||||||||||| ||| | || || || || | ||||| Sbjct 15699 ATCAGCCGGGATGCTAGGAATGTTCTGAATGGAACCATCCTCGGCGATGATACGGTTCTT 15758 Query 62279 GATCTCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTAC 62338 || | ||| ||| || ||| || | | | || ||||| || || || || Sbjct 15759 CATGGCCTCAGACCACAAGCCGAGCTCTGTCAGATCCCTGAGGAGCCAAGGGTTGACGAC 15818 Query 62339 TTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACCGA 62398 || || || |||| | || | || ||| || || ||| || || || | | Sbjct 15819 CTGGAACTCGCCAGCGAGCACACGTCGCTGGTAGATGTTGGAGGTGTATGGCTCAAAGCA 15878 Query 62399 CTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACT 62458 |||||| || |||| || || | || || ||||| ||||| ||||||| ||| | || Sbjct 15879 CTCATTGTTGCCCAGGATCTGCGACGTCGACGCAGTGGGCATTGGTGCCAGCAACAGGCT 15938 Query 62459 ATTTCTAAGACC-GTATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCG 62517 || | || ||| || | | |||| || || || || | ||||| | ||| || || | Sbjct 15939 GTTGCGAACACCAGTCTCCT-TGATCTTCTCCTTGAGCGCATCCCAGTCCCAGAGGTCGG 15997 Query 62518 ACGG 62521 | || Sbjct 15998 AGGG 16001 >seq56 Length=117397 Score = 143 bits (158), Expect = 3e-29 Identities = 163/218 (75%), Gaps = 3/218 (1%) Strand=Plus/Plus Query 33295 AACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAA 33354 |||| | ||| ||||| ||| |||||||||||| || | | ||| || |||||||| Sbjct 53332 AACAGGAGACAGGCGAAGTCGGTGTGCAGACCCTCATCACGAGAAATGAGCTCGTTGGAG 53391 Query 33355 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCA 33414 || || || || ||||| ||||||||||| || ||||| || ||||| ||||||| || Sbjct 53392 AAGGTCAGGCCAGGCATGAGGCCACGCTTCTTGAGCCAGAAAATGGAGGCGAATGCGCCG 53451 Query 33415 GAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGG---CG 33471 |||||||| || || || ||||| ||||||| |||| || |||| || || Sbjct 53452 CTGAAGAAGATGCCCTCGACGGCAGCGAAGGCAACCAGTCGCTGGGCATAGGTGGACTCG 53511 Query 33472 CTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTT 33509 | || || |||||||| ||||||| ||||||||||| Sbjct 53512 CGATCCTGGATCCACTTGAGAGCCCAGTCGGCCTTCTT 53549 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622940160696640