Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20ampelina_20[genbank_20GCA_5F001630405.1_202016-04-25] 904 sequences; 59,495,866 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq56 100 3e-16 >seq56 Length=117397 Score = 100 bits (110), Expect = 3e-16 Identities = 161/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 119642 CTTGTACTCGCCCACACGTTTTTCaaaaaaaTTAGTCTTGCCCTCAAGAGATATGTTATT 119701 || ||| || || ||||| || ||||| || || |||||||| | ||||| ||||| | Sbjct 53052 CTGGTAGTCACCGACACGCTTCTCAAAGAAGTTGGTCTTGCCACCGAGAGAGATGTTCTC 53111 Query 119702 CATAAACTCGAAAGGATTTGCAGTGTTGAAATGCTTGTCGTAGCCCAACTCGAACAACAG 119761 ||| || ||||| || || | | ||| || ||| |||| ||||| ||| || || Sbjct 53112 CATGAAGTCGAAGGGGTTCGACGACTTGTAAACCTTCTCGTTGCCCAGAGCGACCAGGAG 53171 Query 119762 TCGATCTGCCACAAACTCGATGTATTCGCACATG-GATTGCGAATTCATGCCCAACATAG 119820 || || || |||||||||||||| | |||| | ||| || |||||||| | | | Sbjct 53172 ACGGTCGGCAACAAACTCGATGTACTGCTTCATGAGGTTG-GAGTTCATGCCGAGGAGGG 53230 Query 119821 CGACCGGTAAAGCATTGGTAAAGAAATCCTTTTCAATGTCGACCGCTTC 119869 || || | ||| | || ||||| ||||| || ||| |||| || || Sbjct 53231 CGCATGGCAGAGCCTCAGTCAAGAACTCCTTCTCGATGGCGACGGCCTC 53279 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478656991114880