Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20ampelina_20[genbank_20GCA_5F001630405.1_202016-04-25] 904 sequences; 59,495,866 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq48 347 3e-90 >seq48 Length=122101 Score = 347 bits (384), Expect = 3e-90 Identities = 1140/1752 (65%), Gaps = 46/1752 (3%) Strand=Plus/Minus Query 363431 TCAATGGTGATATTGTTGAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCC 363490 || ||||| | |||| || || || ||||| ||| | |||||||| ||| | |||||| Sbjct 17251 TCGATGGTAAAGTTGTCGAGCGGCCACAGCACATGATCATGCGTGTCGCTGTCGGTATCT 17192 Query 363491 ATTGCCCGGATGTTGATGCCGCGATTGAAACATATAAGCT----TCTAAGTGCTCGTGTA 363546 | ||||| || | ||||| || || || || || || | || | Sbjct 17191 GGGGAGACGATGTCGAGAGGGTCATTGAGACCTACAACCTGATGTCAAA---CAAGT-TC 17136 Query 363547 TTCACGCACGCCACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCT 363606 ||||| || ||| | || ||| ||| ||||||||| |||| | | || ||| |||| || Sbjct 17135 TTCACACATGCCTCCCCCACATTGTTCAATGCTGGCACTCCTCAGCCCCAGCTGTCATCA 17076 Query 363607 TGCTTTCTTCTAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAAT 363666 ||||| || | | |||||||| || ||| ||||| |||| |||||| | |||| | Sbjct 17075 TGCTTCCTCGTCGACATGAAGGAGGACAGCATTGAGGGCATCTATGACACCTTAAAGACT 17016 Query 363667 TGTGCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGT-ATCGATCCACAATGTTCGTGC 363725 |||||| | || || |||| || || ||||||||| | | || | ||| | ||||| Sbjct 17015 TGTGCTATGATCTCTAAGATGGCGGGTGGAATTGGTCTGAACG-TGCACCGCATCCGTGC 16957 Query 363726 -ACAGAACAGTTACATTCGC-GGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTT 363783 || | | ||||| ||| ||||| || ||| ||||| | || ||||| Sbjct 16956 CACCGG-CTCATACAT-CGCTGGCACTAACGGTACCTCTAATGGCATTACCCCAATGCTG 16899 Query 363784 CGTGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCG 363843 || || || |||| || || | ||||||||||||||||| ||||| || || Sbjct 16898 CGGGTCTTCAACAACACCGCCCGATACGTCGACCAGGGTGGCAACAAGCGTCCCGGTGCC 16839 Query 363844 TTTGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAA 363903 || ||||| || || ||||| || |||||| | || ||||| ||||| || || || Sbjct 16838 TTCGCTATCTACCTTGAGCCATGGCACGCCGATGTATTCGAGTTCCTTGACCTGCGCAAG 16779 Query 363904 AACACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGAC 363963 ||| || || ||||| | || || |||||||| ||| ||| || ||| | | || Sbjct 16778 AACCACGGTAAGGAGGAGATCCGAGCCCGTGATCTTTTCCTTGCCCTCTGGATCCCCGAT 16719 Query 363964 CATTTTATGAAGCGCGTGGAGGCAGGTAAG--AATTGGTCACTCTTTTGCCCACACGAAT 364021 | ||| |||||||| || ||| | | | | | ||| | || | ||||| |||| | Sbjct 16718 CTTTTCATGAAGCGGGTCGAG--AAGAACGGTGACTGGACCCTGATGTGCCCTAACGAGT 16661 Query 364022 GTCCAGGTCTTTCCGATGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAAT 364081 |||| || || |||| | ||||| || | || ||||| ||||| |||| || Sbjct 16660 GTCCTGGCCTCGCCGACTGCTACGGTGAGGAGTTTGAGGCTCTCTACGAGCAGTACGAGA 16601 Query 364082 CGGAGGGAAAGGCTCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATT 364141 |||||| | ||| ||||| || || |||||||| |||| |||||| | || Sbjct 16600 AGGAGGGTCGTGGTCGCAAGACCATGAAGGCCCAGAAGCTGTGGTATGCCATTCTCGAGG 16541 Query 364142 CGCAGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCA 364201 | |||| |||||| || | |||| ||| ||||||| || |||||| ||| || Sbjct 16540 CTCAGACTGAGACTGGCAACCCCTTCATGCTGTACAAGGACCACGCCAACCGGAAGAGCA 16481 Query 364202 ACCAGCAGCACCTTGGTACAATTCAGCAG-AGCAACCTATGTACCGAGATTATTGAATAC 364260 ||||| || |||| ||||| | || | || |||||| || || ||||| ||||| ||| Sbjct 16480 ACCAGAAGAACCTGGGTACCA-TCCGAAGCTCCAACCTTTGCACTGAGATCATTGAGTAC 16422 Query 364261 ACCGCTCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGT- 364319 | || || || ||| ||||| || ||| | || || || || || || || | ||| Sbjct 16421 TCTGCCCCAGATGAGGTCGCCGTGTGCAACTTGGCCTCCATTGCTCTGCCCGCATATGTT 16362 Query 364320 ---------AAAAGATGGTACTTTTGACCACCAGCATCTTTATGACGTAACCTA--TCAT 364368 || | || ||| || |||||| | | || || ||| | || | Sbjct 16361 GACTACGACAACAACTGCTAC----AACTTCCAGCAGTTGCACGAGGTTACCCAGGTCGT 16306 Query 364369 GCTACTTGCAATCTCGACAAGGTTATCGACAAGAATTATTATCCAATTCCTGAAGCCGAG 364428 | | |||| || ||||| | || || || | || || | || ||| | Sbjct 16305 CGTCC--GCAACCTGAACAAGATCATTGATGTCAACCACTACCCGGTCAAGGAGGCCTAC 16248 Query 364429 CGTTCTAATATGCGTCATCGCCCGATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTT 364488 || ||||| || || || |||||| | || || ||||| || || |||| || Sbjct 16247 AACAGCAACATGCGACACCGACCTATTGGTGTCGGCGTTCAGGGTCTTGCCGACGCATTC 16188 Query 364489 ATGATGCTCAAGATGGCATTTGATTCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTTT 364548 || || ||| | || || || || || || |||| || || ||| ||||||| Sbjct 16187 TTGGCACTACGCATGCCTTTCGACTCCCCGGAGGCCCGTGAGCTGAACAAGCAGATCTTC 16128 Query 364549 GAAACAATGTATTTTGCCGCAATGACTGCTTCGTGTGATTTGGCAAAAACCAAGGGAAAG 364608 || || || || || || | || || || |||| | || || |||| Sbjct 16127 GAGACCATCTACCACGCTGCCCTCACCGCATCAAGTGACATTGCCAAGGTGGAGGGCCCC 16068 Query 364609 TACTCTACTTATGAGGGGTCCCCTCTTTCGCAGGGAAAATTCCAGTTTGATCTATGGAAT 364668 ||| || || ||||| ||| | || || || | | ||||| || | |||||| Sbjct 16067 TACAAGACATACGAGGGCAGCCCCGTCTCACAAGGCATCCTGCAGTTCGACATGTGGAAT 16008 Query 364669 GTCACGCCATCTGTCCGATGGAACTGGGATACGCTACGTTCCAACGTTAAGAAGCATGGT 364728 |||| ||| || | || ||| |||||||| |||| || | ||| || |||| Sbjct 16007 GTCAAGCCCTCCGACCTCTGGGACTGGGATGCGCTCAAGGAGAAGATCAAGGAGACTGGT 15948 Query 364729 ACTCGCAACTCCCTCGTTAC-AGCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGG 364787 ||||||| ||| ||| | || || |||||||| || || || | |||||||| || Sbjct 15947 GTTCGCAACAGCCT-GTTGCTGGCACCAATGCCCACTGCGTCGACGTCGCAGATCCTGGG 15889 Query 364788 AAACAACGAGTGCTTCGAACCGTTTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGG 364847 ||||| |||||||| || || | || ||| | || || || || || | || Sbjct 15888 CAACAATGAGTGCTTTGAGCCATACACCTCCAACATCTACCAGCGACGTGTGCTCGCTGG 15829 Query 364848 AGAATTTCCGGTAGTTAATAAGTACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGG 364907 || || | ||| || || | || ||| |||||| | || | ||| ||||| Sbjct 15828 CGAGTTCCAGGTCGTCAACCCTTGGCTCCTCAGGGATCTGACAGAGCTCGGCTTGTGGTC 15769 Query 364908 TGACAGCATGAAGAACTATATCATCGCCGCTAATGGTTCTGTGCAGAACATTCCAGGATT 364967 ||| |||||||||| ||||||||||| ||||||| | ||||||||||| | | Sbjct 15768 TGAGGCCATGAAGAACCGTATCATCGCCGAGGATGGTTCCATTCAGAACATTCCTAGCAT 15709 Query 364968 TCCAGAAGATCTGAAGCCTATTTACAAAACCGTATGGGAAATTTCCATGCGAACTCTCAT 365027 || | ||| | ||| | | ||||| ||||| ||||| || || | | || ||| Sbjct 15708 CCCGGCTGATATCAAGGCCCTCTACAAGACCGTCTGGGAGATCTCTCAGAGGAC---CAT 15652 Query 365028 TG---ATATGGCGGCCGATCGCGGTGCTTTTATCTGTCAGAGCCAGTCGTTTAACGTATT 365084 || | ||||| || || || ||||| || || |||| ||||| | ||| | Sbjct 15651 TGTGCAGATGGCTGCTGACCGTGGTGCCTTCATTGATCAGTCTCAGTCTCTCAACATCCA 15592 Query 365085 CATGACTCAGCCAACCTCCGCCAAGCTTACATCCATGCATTTCTACGGGTGGAAATCCGG 365144 ||||| ||||| || | |||| | || |||||| ||| ||| ||||| ||| Sbjct 15591 CATGAGGGAGCCATCCATGGGCAAGATCACCAGCATGCACTTCGCCGGCTGGAAGCTCGG 15532 Query 365145 TCTTAAGACAGG 365156 ||| ||||| || Sbjct 15531 TCTCAAGACTGG 15520 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303338503906928