Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20ampelina_20[genbank_20GCA_5F001630405.1_202016-04-25] 904 sequences; 59,495,866 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq48 143 3e-29 seq427 141 9e-29 seq157 125 7e-24 seq230 87.8 2e-12 >seq48 Length=122101 Score = 143 bits (158), Expect = 3e-29 Identities = 701/1105 (63%), Gaps = 19/1105 (2%) Strand=Plus/Plus Query 145058 TTGACGACCTGAAACTCGCCGGCCAACACACGACGCAAATACACGTTAGACGTGAAGGGT 145117 ||||||||||| |||||||| || | |||||| ||| || | ||| || ||| | || Sbjct 15811 TTGACGACCTGGAACTCGCCAGCGAGCACACGTCGCTGGTAGATGTTGGAGGTGTATGGC 15870 Query 145118 TCAAAAGACTCGTTATTGCCCAGGATTTGAGCGGTCGTTGCGGTGGGCATGTACGCCACC 145177 ||||| |||| || ||||||||||| || | |||| || |||||||| |||| | Sbjct 15871 TCAAAGCACTCATTGTTGCCCAGGATCTGCGACGTCGACGCAGTGGGCATTGGTGCCAGC 15930 Query 145178 AATAATGAATTGCGCAGGCCGTGCTTCTTGATGTCTTCCTTTAGCGTACCCCAATCCCAT 145237 || | ||||| | || || |||||| | ||||| |||| | |||| ||||| Sbjct 15931 AACAGGCTGTTGCGAACACCAGTCTCCTTGATCTTCTCCTTGAGCGCATCCCAGTCCCAG 15990 Query 145238 AG--CGAAGTCGGCCTCACGTCCCACATGTCGTACTGCAAAATGCCCTCGCTGGCGGGGC 145295 || || || ||| | || | |||||||||| |||||| ||||| | | |||||| Sbjct 15991 AGGTCGGAG--GGCTTGACATTCCACATGTCGAACTGCAGGATGCCTTGTGAGACGGGGC 16048 Query 145296 TGCCTTGAAAGGAACTGTAACTGCCCCAAGTTTTGGCGAGCTCGCAACTCGCCTCCAGAG 145355 |||| | | | |||| |||| ||||| | || | || || | Sbjct 16049 TGCCCTCGTATGTCTTGTAGGGGCCCTCCACCTTGGCAATGTCACTTGATGCGGTGAGGG 16108 Query 145356 CGCCGAAATAAATTGTCTCGGCAATTTGCCTGTTGAGCAGCATCGCTTCATCGCTCTCGT 145415 | || || || |||||| || ||| |||| ||| || || | ||| Sbjct 16109 CAGCGTGGTAGATGGTCTCGAAGATCTGCTTGTTCAGCTCACGGGCCTCCGGGGAGTCGA 16168 Query 145416 ACGGCATGCGCAGCAGTACAAAAGCATCGGCGAGCCCCTGTATTCCCACGCCGATGGGCC 145475 | |||||||| || | || || ||||| || ||||| | || || || || || | Sbjct 16169 AAGGCATGCGTAGTGCCAAGAATGCGTCGGCAAGACCCTGAACGCCGACACCAATAGGTC 16228 Query 145476 GATGTTTCATGTTGCTCATCCTCGCCGACTCGATAGGATATCGATTACGGTCGATAATTT 145535 | ||| ||||||||| | ||| || || || || | || || || || | Sbjct 16229 GGTGTCGCATGTTGCTGTTGTAGGCCTCCTTGACCGGGTAGTGGTTGACATCAATGATCT 16288 Query 145536 TATTCAAGTTTCGCACTACTACCTTTGTAATGTGCCGCAACTTTTCAAAGTCAAACCGAG 145595 | |||| ||| || || || |||| |||| | |||||| | |||| | | Sbjct 16289 TGTTCAGGTTGCGGACGACGACCTGGGTAACCTCGTGCAACTGCTGGAAGTTGTAGCAGT 16348 Query 145596 CCTCGTCAACGACCACACAGCTATTGACGGCGATCGACGCCAAATTACAAACTGCCGTCT 145655 | ||| | | ||| | | || || || ||||| || || || || || Sbjct 16349 TGTTGTCGTAGTCAACATATGCGGGCAGAGCAATGGAGGCCAAGTTGCACACGGCGACCT 16408 Query 145656 CCTCGGCGTCGCTGTATTGTACGATCTCGGCGCACAAATTGCTACATTTGATGGTTCCCA 145715 | || | | | ||| | | |||||| | ||| | ||| | | |||||| |||| Sbjct 16409 CATCTGGGGCAGAGTACTCAATGATCTCAGTGCAAAGGTTGGAGCTTCGGATGGTACCCA 16468 Query 145716 GATTTTGCTGATTACTTTTCCTGTTGCACGCGTCCTTGTAGAGCATGTACGGTCCGCCAG 145775 | || | ||| || || |||| |||| ||||||||| |||||| | || ||||| Sbjct 16469 GGTTCTTCTGGTTGCTCTTCCGGTTGGCGTGGTCCTTGTACAGCATGAAGGGGTTGCCAG 16528 Query 145776 TCTCCACCTGCGTCTCCACGATAAAACGGTGCAAGTCCTGCGCACGCACCTGCTGCTGGT 145835 |||| ||| | ||| | || | || | ||| || || || | || Sbjct 16529 TCTCAGTCTGAGCCTCGAGAATGGCATACCACAGCTTCTGGGCCTTCA--TGGTCTTGCG 16586 Query 145836 A--GCGGCCCTCTTCTTCGTATTTCCTGTAGAGCTCCTCAAACGCGGAACCGTAGCAATC 145893 | || ||||| | ||||| | | |||||| |||||||| | ||||||||| || Sbjct 16587 ACCACGACCCTCCTTCTCGTACTGCTCGTAGAGAGCCTCAAACTCCTCACCGTAGCAGTC 16646 Query 145894 GGACAGGCCGGGACACTTGTTGGGACACATCAGCGACCATACGCCGTTGGCGTTGACGCG 145953 || ||||| ||||||| ||| || |||||||| | ||| | ||||| | ||| || Sbjct 16647 GGCGAGGCCAGGACACTCGTTAGGGCACATCAGGGTCCAGTCACCGTTCTTCTCGACCCG 16706 Query 145954 CTCCATAAACAAATCTGGCACCCACAGCGCGTACATCAAGTCGCGCGCTTTGCAATCCTC 146013 || ||| || | ||| || | ||| || || | | || || ||| | ||||| Sbjct 16707 CTTCATGAAAAGATCGGGGATCCAGAGGGCAAGGAAAAGATCACGGGCTCGGATCTCCTC 16766 Query 146014 AGCACCCATGTT-TCGCTTCAAATTAAGCACACT---ATAGATGTCCGCGTGCCACGGTT 146069 ||| ||| | || || | ||| | ||| ||| | || |||||||| || | Sbjct 16767 CTTACCGTGGTTCTTGC-GCAGGTCAAGGA-ACTCGAATACA--TCGGCGTGCCATGGCT 16822 Query 146070 CAATATAGACGGCGAGGGCTCCTTTTCG---TTTGCCACCCTGGTCCACGTGACGTACCA 146126 ||| |||| |||| ||| || || |||||||||||||| |||| || | Sbjct 16823 CAAGGTAGATAGCGAAGGCACCGGGACGCTTGTTGCCACCCTGGTCGACGTATCGGGCGG 16882 Query 146127 TGTTGTTAAAGACGCGCACCATGGG 146151 ||||||| ||||| |||| ||| || Sbjct 16883 TGTTGTTGAAGACCCGCAGCATTGG 16907 >seq427 Length=29395 Score = 141 bits (156), Expect = 9e-29 Identities = 168/228 (74%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 || || || | ||| || || | ||| | ||| |||||||||||||||||||| ||| Sbjct 25240 CCGCCACGAAGACGGAGGACGAGATGGAGGGTAGACTCCTTTTGAATGTTGTAGTCGGAG 25181 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| |||||| || |||||||| || |||| | |||||||||||| || ||| Sbjct 25180 AGGGTGCGGCCGTCCTCGAGTTGCTTGCCGGCAAAGATAAGACGCTGCTGGTCAGGGGGG 25121 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| ||| || ||||| | || | ||||||| |||||||| Sbjct 25120 ATGCCCTCCTTGTCTTGGATCTTGGACTTGACATTGTCGATGGTATCGGAGGACTCGACC 25061 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235 |||| || | ||| || || || || || || ||||| ||||||||| Sbjct 25060 TCGAGCGTGATGGTCTTGCCTGTGAGGGTCTTCACGAAGATCTGCATG 25013 Score = 134 bits (148), Expect = 1e-26 Identities = 148/197 (75%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 131038 GTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCT 131097 || || ||||| ||||||||||| ||| | |||||| |||||| |||||||| || Sbjct 25438 GTGGATTCCTTCTGAATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCAAGCTGCTTTCCA 25379 Query 131098 GCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTG 131157 ||| |||| | |||||||||||| || ||||| || || ||||| ||| || |||| Sbjct 25378 GCGAAGATCAGACGCTGCTGGTCTGGGGGGATACCCTCCTTGTCCTGGATCTTGGACTTG 25319 Query 131158 AGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTT 131217 | | || | ||||| | |||||||| |||| ||||| ||| || || || ||||| Sbjct 25318 ACATTGTCGATGGTATCAGAGGACTCGACCTCGAGGGTAATGGTCTTGCCAGTCAGAGTC 25259 Query 131218 TTTACGAAAATCTGCAT 131234 || ||||| |||||||| Sbjct 25258 TTGACGAAGATCTGCAT 25242 >seq157 Length=302622 Score = 125 bits (138), Expect = 7e-24 Identities = 165/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| |||| ||||| || | || | ||| |||||||| || |||||||| ||| Sbjct 142247 CCACCACGCAGGCGCAGGACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAG 142306 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||| || |||||| ||||||||||| ||| |||| | |||||||||||| || || Sbjct 142307 AGGGTACGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCTGGGGGA 142366 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || ||||| ||||| ||| || ||||| | || | || |||| ||||| | Sbjct 142367 ATGCCTTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCGGAAGACTCCACC 142426 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATGA 131236 || | ||| | || || || || || || || ||||| |||||||||| Sbjct 142427 TCAAGGGTGATAGTCTTGCCCGTGAGGGTCTTCACGAAGATCTGCATGA 142475 >seq230 Length=63387 Score = 87.8 bits (96), Expect = 2e-12 Identities = 128/181 (71%), Gaps = 0/181 (0%) Strand=Plus/Plus Query 131045 CCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGA 131104 |||| || |||||||| ||| || |||||| ||||| ||||||||||| ||| ||| Sbjct 45657 CCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCCTCAAGCTGCTTGCCGGCGAAGA 45716 Query 131105 TTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCT 131164 | || ||||||||||| || || || || || ||||| ||| || ||||| | | Sbjct 45717 TCAATCGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGT 45776 Query 131165 CCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGA 131224 | | || || | |||||| | || | ||| | || || || || || || || |||| Sbjct 45777 CGATGGTGTCAGAGGACTCCACCTCAAGGGTGATAGTCTTGCCCGTCAGGGTCTTCACGA 45836 Query 131225 A 131225 | Sbjct 45837 A 45837 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472007466255360