Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20ampelina_20[genbank_20GCA_5F001630405.1_202016-04-25] 904 sequences; 59,495,866 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq427 134 1e-26 seq230 93.3 4e-14 >seq427 Length=29395 Score = 134 bits (148), Expect = 1e-26 Identities = 152/204 (75%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || || | || || || || |||| || || || || || || Sbjct 25014 ATGCAGATCTTCGTGAAGACCCTCACAGGCAAGACCATCACGCTCGAGGTCGAGTCCTCC 25073 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 |||||| | ||| || |||| || || |||||||||||||| || || || || || Sbjct 25074 GATACCATCGACAATGTCAAGTCCAAGATCCAAGACAAGGAGGGCATCCCCCCTGACCAG 25133 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || |||||||| ||||||||||| || | ||||| ||||||| ||||||| |||||| Sbjct 25134 CAGCGTCTTATCTTTGCCGGCAAGCAACTCGAGGACGGCCGCACCCTCTCCGACTACAAC 25193 Query 22399 ATTCAAAAAGAATCCACCATACAT 22422 |||||||| || || ||| | ||| Sbjct 25194 ATTCAAAAGGAGTCTACCCTCCAT 25217 Score = 116 bits (128), Expect = 3e-21 Identities = 144/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || ||| | || || || || | || || || || || || | Sbjct 25242 ATGCAGATCTTCGTCAAGACTCTGACTGGCAAGACCATTACCCTCGAGGTCGAGTCCTCT 25301 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 |||||| | ||| || |||| || || || |||||||||||||| || || || || Sbjct 25302 GATACCATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGTATCCCCCCAGACCAG 25361 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||||| || || || || || ||| | ||||| ||||||| ||||||| |||||| Sbjct 25362 CAGCGTCTGATCTTCGCTGGAAAGCAGCTTGAGGACGGCCGCACCCTCTCCGACTACAAC 25421 Query 22399 ATTCAAAAAGAATCCAC 22415 ||||| || |||||||| Sbjct 25422 ATTCAGAAGGAATCCAC 25438 Score = 98.7 bits (108), Expect = 8e-16 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| ||||| || || || || || || || ||| |||| ||||| || || | | Sbjct 25470 ATGCAGATTTTCGTCAAGACCTTGACGGGCAAGACGATCACGCTTGAGGTCGAGTCATCA 25529 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| | | || || ||||| ||||||||||| |||||||| || || Sbjct 25530 GACACGATTGACAACGTGAAGTCTAAGATTCAGGACAAGGAGGGAATTCCACCAGACCAG 25589 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||||| || || || ||||| ||||| || ||| ||| || | || || |||||| Sbjct 25590 CAGCGTCTCATTTTCGCTGGCAAGCAGTTGGAAGATGGCCGGACGCTATCTGACTACAAC 25649 Query 22399 ATTCAAAAAGAATCCAC 22415 || || || || || || Sbjct 25650 ATCCAGAAGGAGTCGAC 25666 >seq230 Length=63387 Score = 93.3 bits (102), Expect = 4e-14 Identities = 119/164 (73%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 22243 ACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAA 22302 || || || || |||| ||||| ||||| || | || ||| | ||| | |||| Sbjct 45822 ACGGGCAAGACTATCACCCTTGAGGTGGAGTCCTCTGACACCATCGACAACGTCAAGTCC 45763 Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362 || || || ||||||||||| ||||| || || || || || | || || |||||||| Sbjct 45762 AAGATCCAGGACAAGGAGGGCATTCCCCCAGACCAGCAGCGATTGATCTTCGCCGGCAAG 45703 Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAA 22406 ||| | |||||| ||||||| | ||||| |||||||| || || Sbjct 45702 CAGCTTGAGGATGGCCGCACCCTGTCCGACTACAACATCCAGAA 45659 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419723375646760