Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20ampelina_20[genbank_20GCA_5F001630405.1_202016-04-25] 904 sequences; 59,495,866 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq48 434 2e-116 seq56 313 5e-80 >seq48 Length=122101 Score = 434 bits (480), Expect = 2e-116 Identities = 1128/1708 (66%), Gaps = 55/1708 (3%) Strand=Plus/Plus Query 243741 TGAACTGGACGGGTGCGACGGCGGCCTTGGTCCTCAGGTAGTACATGCCGGTCTTGAGTC 243800 ||||||||| ||||||| | || |||| || | |||||||||||||| |||||||| | Sbjct 15473 TGAACTGGATGGGTGCGGCAGCTGCCTGAGTGCGGAGGTAGTACATGCCAGTCTTGAGAC 15532 Query 243801 CACTGGACCAGGCGTGGAGGTGCATGGCCGTCAGCTTCTTCATCTTGAGCTTTGGGTCGT 243860 | |||| || || ||||||| || | ||| ||| || ||| || Sbjct 15533 CGAGCTTCCAGCCGGCGAAGTGCATGCTGGTGATCTTGCCCATG--GA----TGGCTC-- 15584 Query 243861 CCTCGCACAGAAAGAGGTTGAGGGACTGGCTCTGGTCGACGAAGGGCGCCCGCTCTGCGG 243920 |||| | || |||||| ||||| ||| || | ||||| | || || || | Sbjct 15585 CCTC----ATGTGGATGTTGAGAGACTGAGACTGATCAATGAAGGCACCACGGTCAGCAG 15640 Query 243921 CCATGGTGATGA-GGTCCTTCTGAGATATCTCATACGCCGTCTTGTAGATGGGCTTGAGG 243979 |||| | | |||||| |||||| ||||| | | |||||||||| || ||||| Sbjct 15641 CCATCTGCACAATGGTCCT-CTGAGAGATCTCCCAGACGGTCTTGTAGAGGGCCTTGATA 15699 Query 243980 TGCTCGGGGAACCCTTCGATGTTCTGCACCGAGCCCTTGTGGACGATGAGCTGGGTGCGC 244039 | | |||| | |||||||| | || || | | | |||||| || | | Sbjct 15700 TCAGCCGGGATGCTAGGAATGTTCTGAATGGAACCATCCTCGGCGATGATACGGTTCTTC 15759 Query 244040 ATGTTATCGTTCCACAGGCCCAAGCGCTC-CAGCGCCTCGACCAGGTGCCT---GTTCAC 244095 ||| || ||||| ||| | || || ||| || || || ||| ||| || Sbjct 15760 ATGGCCTCAGACCACAAGCCGA-GCTCTGTCAGATCCCTGA---GGAGCCAAGGGTTGAC 15815 Query 244096 CACCTGAAACTCTCCCGACAGCACGCGGCGCTGGTAGAGGTTGCTGCTGAGCGGCTCGAT 244155 ||||| ||||| || | ||||| || |||||||||| |||| | || ||||| | Sbjct 15816 GACCTGGAACTCGCCAGCGAGCACACGTCGCTGGTAGATGTTGGAGGTGTATGGCTCAAA 15875 Query 244156 GCTCTCCGTGTTGCCCAGTATCTGCGCCGTGCTCGCAGTCGGCATGGGCGACACCAGCAG 244215 || ||| |||||||||| ||||||| ||| |||||| ||||| || | || || ||| Sbjct 15876 GCACTCATTGTTGCCCAGGATCTGCGACGTCGACGCAGTGGGCATTGGTGCCAGCAACAG 15935 Query 244216 ACTGTTCCTCACGCCGTGCCTCTGGATGCGGAGTCTGAGCTCGTTCCAGTCCCACATGCC 244275 ||||| | || || | || ||| ||||| | | ||||||||| Sbjct 15936 GCTGTTGCGAACACCAGTCTCCTTGATCTTCTCCTTGAGCGCATCCCAGTCCCA------ 15989 Query 244276 CGAGAGGTCCTCGCGTTTGAGGCCCCACATGTCAAACTGCAGCAGCCCCTTGCTGACGGG 244335 |||||| | | |||| ||||||||| |||||||| | || | |||||| Sbjct 15990 ---GAGGTCGGAGGGCTTGACATTCCACATGTCGAACTGCAGGATGCCTTGTGAGACGGG 16046 Query 244336 GCTGCCCTCGTAGGTCGGGTAGGGACCGTCGCGCTGGGCCAGCTTACAGCTCTCGTCGAG 244395 |||||||||||| ||| |||||| || || || ||| | | || || ||| Sbjct 16047 GCTGCCCTCGTATGTCTTGTAGGGGCCCTCCACCTTGGCAATGTCACTTGATGCGGTGAG 16106 Query 244396 GGCGGCGTAGTAGATGGTCTCGAAGATCATCTTGTTCATGTCGCGGGCCTTGCCGCAGGT 244455 ||| |||| ||||||||||||||||||| |||||||| || ||||||| | || Sbjct 16107 GGCAGCGTGGTAGATGGTCTCGAAGATCTGCTTGTTCAGCTCACGGGCCTCCGGGGAGTC 16166 Query 244456 GAAGGGGATGCCCATCATCATGAAGACGTCGGCCAGTCCCTGCACGCCGATGCCGATGGG 244515 ||| || |||| | || ||| ||||||| || ||||| ||||||| || || || Sbjct 16167 GAAAGGCATGCGTAGTGCCAAGAATGCGTCGGCAAGACCCTGAACGCCGACACCAATAGG 16226 Query 244516 TCTGTGTCGCTTGTTGGAGCGCATGGCTTCGGGCACGGGGTAAAAGTTGCCGTCGATCAC 244575 || ||||||| ||||| | ||| || || ||||| |||| | || || | Sbjct 16227 TCGGTGTCGCATGTTGCTGTTGTAGGCCTCCTTGACCGGGTAGTGGTTGACATCAATGAT 16286 Query 244576 CTTGTTGAGGTTGCGGGTGATCATGCGGACGACGTCGGCCAGCAGCTGAAAGTCGTACTC 244635 |||||| ||||||||| || | || || ||| || | |||| |||| ||| Sbjct 16287 CTTGTTCAGGTTGCGGACGACGACCTGGGTAACCTCGTGCAACTGCTGGAAGTTGTAGCA 16346 Query 244636 GTAGGGATCCTCGGCGATGGTGATCCTCACAAACTCGTTGAGGGCGACGCTGGCCAGGTT 244695 || | | | || | || | ||| | || || || | | ||||| ||| Sbjct 16347 GTTG------TTGTCG-TAGTCA-----ACATATGCGGGCAGAGCAATGGAGGCCAAGTT 16394 Query 244696 GCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGAGGTTACTGCA 244755 ||| ||||| ||||| || | | | ||||| | ||||| ||||| ||||| || Sbjct 16395 GCACACGGCGACCTCATCTGGGGCAGAGTACTCAATGATCTCAGTGCAAAGGTTGGAGCT 16454 Query 244756 CTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTTGTAGAGCAT 244815 |||||| ||||||| || || ||| ||| |||| | ||||||||| ||||| Sbjct 16455 TCGGATGGTACCCAGGTTCTTCTGGTTGCTCTTCCGGTTGGCGTGGTCCTTGTACAGCAT 16514 Query 244816 GAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCAGAGGTCCCTAGCCTT 244875 |||||| || ||||| ||| || |||| | | | ||| || | | ||||| Sbjct 16515 GAAGGGGTTGCCAGTCTCAGTCTGAGCCTCGAGAATGGCATACCACAGCTTCTGGGCCTT 16574 Query 244876 GACCGTCCTGCGAGCCTTGCCCTCTGCCTCGTAGCGGGTGTACAGGGCCTCGAACTCGGG 244935 | ||| ||||| | ||||| |||||| | ||| || ||||| ||||| Sbjct 16575 CATGGTCTTGCGACCACGACCCTCCTTCTCGTACTGCTCGTAGAGAGCCTCAAACTCCTC 16634 Query 244936 GCCCCAGACCTCGTCTAGGCCGGGGCACGACGCCGGGCACATGAGACTCCACTCGCCGCC 244995 || || ||| | ||||| || ||| |||||||| || |||| || ||| Sbjct 16635 ACCGTAGCAGTCGGCGAGGCCAGGACACTCGTTAGGGCACATCAGGGTCCAGTCACCGTT 16694 Query 244996 GTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGAGGTCCCTGGT 245055 | || ||||| || |||||| || ||||||||||||||||| |||| || || | || Sbjct 16695 CTTCTCGACCCGCTTCATGAAAAGATCGGGGATCCAGAGGGCAAGGAAAAGATCACGGG- 16753 Query 245056 CCTCTG--CTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAGACGTCGACG 245113 ||| | ||| ||| || |||||| | ||| || | || || || || ||| || Sbjct 16754 -CTCGGATCTCCTCCTTACCGTGGTTCTTGCGCAGGTCAAGGAACTCGAATACATCGGCG 16812 Query 245114 TGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCCCTGGTCCACC 245173 ||||| ||||| | ||||| ||||| ||| ||||| ||||||||||| |||||||| | Sbjct 16813 TGCCATGGCTCAAGGTAGATAGCGAAGGCACCGGGACGCTTGTTGCCACCCTGGTCGA-- 16870 Query 245174 ATCCTCTCGAGCG----CGTTGAAGATGCGCAGGGTAGGCACTATGCCGTTAGAGTGGCC 245229 | | ||| ||| |||||||| ||||| | || ||||| |||||| || Sbjct 16871 --CGTATCGGGCGGTGTTGTTGAAGACCCGCAGCATTGGGGTAATGCCATTAGAGGTACC 16928 Query 245230 GTTGGTGCCCTTGATGTAGGCGCCCTTGCCCCTGAGGTTGCTGATGGACATGCCTAGTCC 245289 ||| ||||| |||||| | ||| || | | || | | | | || || | ||| Sbjct 16929 GTTAGTGCCAGCGATGTATGAGCCGGTGGCACGGATGCGGTGCACGTTCAGACCAATTCC 16988 Query 245290 GCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTGCTATGCCCTCCATGCT 245349 || || ||| ||||| | || || |||| | |||||| |||||||| ||||| Sbjct 16989 ACCCGCCATCTTAGAGATCATAGCACAAGTCTTTAAGGTGTCATAGATGCCCTCAATGCT 17048 Query 245350 GTCCGACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTGGGGCTTGGGGCTGCACGAGTT 245409 |||| |||||||| || || ||||| || ||||||||||||| || ||| | || Sbjct 17049 GTCCTCCTTCATGTCGACGAGGAAGCATGATGACAGCTGGGGCTGAGGAGTGCCAGCATT 17108 Query 245410 GAACAGAGTGGGGCTGGCGTGGGTAAAG 245437 ||||| |||||| ||| || || ||| Sbjct 17109 GAACAATGTGGGGGAGGCATGTGTGAAG 17136 >seq56 Length=117397 Score = 313 bits (346), Expect = 5e-80 Identities = 382/515 (74%), Gaps = 7/515 (1%) Strand=Plus/Minus Query 42633 CCCTGCATCAAGAAGAAGGCGGACTGGGCGCTCAACTGGATCGAGAGTCCCGACGCAACG 42692 || |||||| |||||||| |||||||| ||||| |||||| || || ||| | || Sbjct 53561 CCGTGCATCCGCAAGAAGGCCGACTGGGCTCTCAAGTGGATCCAGGATCGCGAGTCCACC 53502 Query 42693 TTCGGCGAGAGGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTC 42752 | | | || | ||||| ||||| | ||||||||||||||||||||| ||||| ||| Sbjct 53501 TATGCCCAGCGACTGGTTGCCTTCGCTGCCGTCGAGGGCATCTTCTTCAGCGGCGCATTC 53442 Query 42753 GCCTCCATCTTCTGGCTCAAGCAGAA-GGTGTCGATGCCCGGACTCACCTTCTCGAACGA 42811 |||||||| |||||||||||| || || || ||||| || || |||||||| ||||| Sbjct 53441 GCCTCCATTTTCTGGCTCAAGAAGCGTGGCCTC-ATGCCTGGCCTGACCTTCTCCAACGA 53383 Query 42812 ACTCATCAGCAGGGACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCA 42871 ||||| | || ||||| ||||| | ||||| ||||| ||||||||||| || Sbjct 53382 GCTCATTTCTCGTGATGAGGGTCTGCACACCGACTTCGCCTGTCTCCTGTTCTC---TCA 53326 Query 42872 CCTCAGGCACAAGCCCTCGAAGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAGAT 42931 ||| ||| || || ||| |||| ||| || ||||||||| |||||||| | || Sbjct 53325 CCTGAGGAACCGTCCAAGCAAGCAGCGTGTCGAGGACATCATCACCGAGGCCGTCGCCAT 53266 Query 42932 CGAGAAGGAGTTCCTCACGCAGTCGCTGCCCGTGTCCCTGGTCGGCATGAACCACGACCT 42991 ||||||||||||| | || || | ||||| |||| ||||||||||| | |||| Sbjct 53265 CGAGAAGGAGTTCTTGACTGAGGCTCTGCCATGCGCCCTCCTCGGCATGAACTCCAACCT 53206 Query 42992 CATGTGCAAGTACATCCAGTACGTCGCCGACCATCTCCTGTGCCAGATGGGTCTC-AGCC 43050 |||| |||||||| ||| || ||||||| ||||||| | |||| | || Sbjct 53205 CATGAAGCAGTACATCGAGTTTGTTGCCGACCGTCTCCTGGTCGCTCTGGGCAACGAGAA 53146 Query 43051 GCCTCTACAACACGCCGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGA 43110 | | ||||| || || |||||||||||| |||||||||||||| | | ||||||| Sbjct 53145 G-GTTTACAAGTCGTCGAACCCCTTCGACTTCATGGAGAACATCTCTCTCGGTGGCAAGA 53087 Query 43111 CCAACTTTTTCGAGAAGCGCGTCGCCGACTACCAG 43145 ||||||| || |||||||| |||| ||||||||| Sbjct 53086 CCAACTTCTTTGAGAAGCGTGTCGGTGACTACCAG 53052 Score = 141 bits (156), Expect = 2e-28 Identities = 239/339 (71%), Gaps = 13/339 (4%) Strand=Plus/Minus Query 42300 ATCTGGTCCATGTACAAGAAGG-CGCAGTTCTCCAACTGGACCGCCGAGGAGATTGACCT 42358 |||||| |||||||||||| || || | ||| |||||| ||||||||||| || || Sbjct 53955 ATCTGGCAGATGTACAAGAAGCACGAAGCT-TCCTTCTGGACTGCCGAGGAGATCGATCT 53897 Query 42359 GGCCAAGGACACGGCCGGCTGGGAGTCACTGTCTGAGA-ACGAAAAG---TTTTTCCTCA 42414 |||||||| | || |||| || || | |||| |||| || | ||| || Sbjct 53896 CTCCAAGGACCTGCACGACTGG-AGCAACCGCCTGACCGACGACGAGCGATACTTCGTCT 53838 Query 42415 AAAACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCA 42474 |||| || ||||||||||| || || || || || ||||| |||||||||| Sbjct 53837 CCCACATCCTCGCCTTCTTCGCTGCTTCAGATGGAATCGTCAACGAGAACCTGGTGGAGC 53778 Query 42475 GGTTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCA 42534 | |||| ||||| ||| | ||||||||||||||||||||||||||||| | Sbjct 53777 GCTTCAGCGGCGAGGTTCAGATCCCAGAGGCGCGCTGCTTCTACGGCTTCCAGATCATGA 53718 Query 42535 TAGAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCA---ACACGTACATCCTGGATC 42591 | |||||| | ||||||||| |||| | ||||||| |||| |||||| ||| | Sbjct 53717 TGGAGAACATCCACTCTGAGACGTACTC---GCTGCTCATCGACACCTACATCAAGGAGC 53661 Query 42592 CCGTCGAGCGTAACGGGCTGTTCAAGGCCATGGAGACGA 42630 ||| | |||| | | || |||| ||||| || |||| Sbjct 53660 CCGCCCAGCGCACCCACCTTCTCAATGCCATTGACACGA 53622 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944328528967040