Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20ampelina_20[genbank_20GCA_5F001630405.1_202016-04-25] 904 sequences; 59,495,866 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq56 120 7e-22 >seq56 Length=117397 Score = 120 bits (132), Expect = 7e-22 Identities = 180/253 (71%), Gaps = 2/253 (1%) Strand=Plus/Minus Query 243502 ATCATCACAGAAGCAGTTGAAAACGAAAAGGAATTCATTTGCGACGCTATTCCATGCCGG 243561 |||||||| || || || | | ||| ||||| ||| | || ||| | |||||| Sbjct 53288 ATCATCACCGAGGCCGTCGCCATCGAGAAGGAGTTCTTGACTGAGGCTCTGCCATGCGCC 53229 Query 243562 CTTATTGGCATGAACTCTGAACTCATGGGACAGTACATCGAATTCGTAGCCGACCGCATT 243621 || | ||||||||||| | |||||| ||||||||||| || || |||||||| | Sbjct 53228 CTCCTCGGCATGAACTCCAACCTCATGAAGCAGTACATCGAGTTTGTTGCCGACCGTCTC 53169 Query 243622 TTCATCGCGCTTGGTTATGAGAAAGTGTACAACTCCAAGAACCCCTTTGCCTTTATGGAG 243681 | |||| || || | ||||| || ||||| || ||||||||| | ||| |||||| Sbjct 53168 CTGGTCGCTCTGGGCAACGAGAAGGTTTACAAGTCGTCGAACCCCTTCGACTTCATGGAG 53109 Query 243682 CTCATTTCGCTTCAAGGGAAAACTAACTTCTTCGAAAAGCGTGTCAGTGATTATCA-ACG 243740 ||| || || || || || |||||||| || ||||||||| |||| || || | | Sbjct 53108 AACATCTCTCTCGGTGGCAAGACCAACTTCTTTGAGAAGCGTGTCGGTGACTACCAGAAG 53049 Query 243741 CCCTGGTGTGATG 243753 || ||||| ||| Sbjct 53048 GCC-GGTGTCATG 53037 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102867225892400