Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20ampelina_20[genbank_20GCA_5F001630405.1_202016-04-25] 904 sequences; 59,495,866 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq48 210 3e-49 >seq48 Length=122101 Score = 210 bits (232), Expect = 3e-49 Identities = 833/1294 (64%), Gaps = 30/1294 (2%) Strand=Plus/Plus Query 113565 TGAACTGAATGGGTCTCGCCTTGGCCTTTGATCGGAGGTAGTACATCCCCGTCTTGAGCC 113624 ||||||| |||||| || |||| | |||||||||||||| || |||||||| | Sbjct 15473 TGAACTGGATGGGTGCGGCAGCTGCCTGAGTGCGGAGGTAGTACATGCCAGTCTTGAGAC 15532 Query 113625 CCTGCTTCCAGGCATACATATGCATCGAGGACAACTTGGAGAGTGTTGGACTTTC-CATG 113683 | |||||||| | | ||||| || | |||| | | ||| || | |||| Sbjct 15533 CGAGCTTCCAGCCGGCGAAGTGCATGCTGGTGATCTTGCCCATGGATGG-CTCCCTCATG 15591 Query 113684 AAGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCACGATCCGCCGCCATATCAATC 113743 || ||| | | || || ||||| |||||| ||||| || || ||||| | | Sbjct 15592 TGGATGTTGAGAGACTGAGACTGATCAATGAAGGCACCACGGTCAGCAGCCATCTG---C 15648 Query 113744 ACATCCTTCATCTT---GATTTCCCACACAGTTCTGTAGAGGTTCTTAATATCATCTGGG 113800 ||| || ||| ||| ||||| || || |||||||| ||| |||||| | ||| Sbjct 15649 ACAATGGTCCTCTGAGAGATCTCCCAGACGGTCTTGTAGAGGGCCTTGATATCAGCCGGG 15708 Query 113801 ATATCCACGA-TATTTTGGATGGAGCCACCCGCCTTGACCATGAGATCCTTCATATCCTT 113859 || | | || | || || ||||| ||| || | || || | | |||||| ||| Sbjct 15709 ATG-CTAGGAATGTTCTGAATGGAACCATCCTCGGCGATGATACGGTTCTTCATGGCCTC 15767 Query 113860 TGACCAGAGACCAATCTTTTTGAGATCCTCCACGAGATGCTTATTGACAACAACAAACTC 113919 ||||| | || | || | | |||||| | ||| ||||| || ||||| Sbjct 15768 AGACCACAAGCCGAGCTCTGTCAGATCCCTGAGGAGCCAAGGGTTGACGACCTGGAACTC 15827 Query 113920 ACCCGCGAGGGTGCGTCTCAGATAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTT 113979 || ||||| |||| | | ||||| |||| |||||||||||||||||||||||||| Sbjct 15828 GCCAGCGAGCACACGTCGCTGGTAGATGTTGGAGGTGTATGGCTCAAAGCACTCATTGTT 15887 Query 113980 ACCCAAGATTTGGGCGGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAG 114039 |||| ||| || | || || || |||||||| ||||||| | |||||||| || | Sbjct 15888 GCCCAGGATCTGCGACGTCGACGCAGTGGGCATTGGTGCCAGCAACAGGCTGTTGCGAAC 15947 Query 114040 ACCCTTTTCCCTAATGCGTTCCTTGAGGGCGTCCCAGTCGTAGTTGAGCTTTGTCTCCCC 114099 ||| | ||| | || |||||||| || |||||||| || | | || | Sbjct 15948 ACCAGTCTCCTTGATCTTCTCCTTGAGCGCATCCCAGTCCCAGAGGTCGGAGGGCTTGAC 16007 Query 114100 CTGCCACATATCAAACTGGAGGATACCTTGGGAGGCTGGCGATCCCTCAAATGTCTCGTA 114159 | |||||| || ||||| ||||| ||||| ||| | || ||||| |||||| ||| Sbjct 16008 ATTCCACATGTCGAACTGCAGGATGCCTTGTGAGACGGGGCTGCCCTCGTATGTCTTGTA 16067 Query 114160 TGGGCCCTCAACCTCCGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTC 114219 |||||||| |||| || | || || |||||| ||||| || || ||||| Sbjct 16068 GGGGCCCTCCACCTTGGCAATGTCACTTGATGCGGTGAGGGCAGCGTGGTAGATGGTCTC 16127 Query 114220 AAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATC-AAACGC--GAGTCGGCACAA 114276 || || | |||| | |||||| ||| || ||| || | || | ||| Sbjct 16128 GAAGATCTGCTTGTTCAGCTCACGGGCCTCCGGGGAGTCGAAAGGCATGCGTAGTGCCAA 16187 Query 114277 AATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGA 114336 ||| | || || ||||| || || |||| ||||| || || |||| ||| || Sbjct 16188 ---GAATGCGTCGGCAAGACCCTGAACGCCGACACCAATAGGTCGGTGTCGCATGTT--G 16242 Query 114337 CTTTCGAGCGGTCTCC---ACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTT 114393 || | | || |||| || || || || ||| || | | | || || || Sbjct 16243 CTGTTG-TAGGCCTCCTTGACCGGGTAGTGGTTGACATCAATGATCTTGTTCAGGTTGCG 16301 Query 114394 GGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATT 114453 | ||| |||| || | || || | || | | | | | | | | || | | Sbjct 16302 GACGACGACCTGGGTAACCTCGTGCAACTGCTGGAAGTTGTAGCAGTTGTTGTCGTAGTC 16361 Query 114454 GACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGT 114513 ||||| || || || || || |||| || ||||| | | |||||| ||| Sbjct 16362 AACATATGCGGGCAGAGCAATGGAGGCCAAGTTGCACACGGCGACCTCATCTGGGGCAGA 16421 Query 114514 GTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATT 114573 |||||| || || || || || | || || || ||||| |||| |||||| || || Sbjct 16422 GTACTCAATGATCTCAGTGCAAAGGTTGGAGCTTCGGATGGTACCCAGGTTCTTCTGGTT 16481 Query 114574 TGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGA 114633 ||| ||| |||||||| |||||| | || | || ||||| || || | Sbjct 16482 GCTCTTCCGGTTGGCGTGGTCCTTGTACAGCATGAAGGGGTTGCCAGTCTCAGTCTGAGC 16541 Query 114634 CTTGAGAATAGCCTTCCAGA-CATCGGCGGCTGGCACAGTGGCGTTG---GCTCGCCCCT 114689 || |||||| || | ||| | | || | ||| || ||| ||| | || |||| Sbjct 16542 CTCGAGAATGGCATACCACAGCTTCTG-GGCCTTCA---TGGTCTTGCGACCACGACCCT 16597 Query 114690 CCTCCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTG 114749 ||| |||||||| |||||| || |||||||| ||||| | || | ||| || | Sbjct 16598 CCTTCTCGTACTGCTCGTAGAGAGCCTCAAACTCCTCACCGTAGCAGTCGGCGAGGCCAG 16657 Query 114750 GTGCCTTATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACACGCTTCATGAAGA 114809 | || | ||||| | || | ||| | ||| || ||| || ||||||||||| | Sbjct 16658 GACACTCGTTAGGGCACATCAGGGTCCAGTCACCGTTCTTCTCGACCCGCTTCATGAAAA 16717 Query 114810 GGTCTGGGATCCAGAGAGCTGAGAAGAGATCCCG 114843 | || ||||||||||| || ||| ||||| || Sbjct 16718 GATCGGGGATCCAGAGGGCAAGGAAAAGATCACG 16751 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597346849904320