Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20ampelina_20[genbank_20GCA_5F001630405.1_202016-04-25] 904 sequences; 59,495,866 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq427 116 4e-21 seq157 91.5 1e-13 >seq427 Length=29395 Score = 116 bits (128), Expect = 4e-21 Identities = 153/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 || || || |||| || ||||| || ||||||||||| || | || |||||| |||| Sbjct 25453 AGGACCAGGTGAAGAGTGGATTCCTTCTGAATGTTGTAGTCGGAGAGGGTGCGGCCGTCC 25394 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 ||||||||||| || || | || || ||||||||||| || || || || || || || Sbjct 25393 TCAAGCTGCTTTCCAGCGAAGATCAGACGCTGCTGGTCTGGGGGGATACCCTCCTTGTCC 25334 Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411 || || || ||| ||| || | |||||| || || || || | || | |||| Sbjct 25333 TGGATCTTGGACTTGACATTGTCGATGGTATCAGAGGACTCGACCTCGAGGGTAATGGTC 25274 Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 ||||| |||| ||| || ||||| || ||||| Sbjct 25273 TTGCCAGTCAGAGTCTTGACGAAGATCTGCAT 25242 Score = 114 bits (126), Expect = 1e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 |||||| || | | || || ||||| | || || || |||||||||||||| || | Sbjct 25241 ACCGCCACGAAGACGGAGGACGAGATGGAGGGTAGACTCCTTTTGAATGTTGTAGTCGGA 25182 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 || |||||| |||| || || |||||||||||| | || || ||||||||||| || || Sbjct 25181 GAGGGTGCGGCCGTCCTCGAGTTGCTTGCCGGCAAAGATAAGACGCTGCTGGTCAGGGGG 25122 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 || || || || ||||| || || ||| ||| || | ||||| || || || Sbjct 25121 GATGCCCTCCTTGTCTTGGATCTTGGACTTGACATTGTCGATGGTATCGGAGGACTCGAC 25062 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || | || | ||||||||| || | || || ||||| || ||||| Sbjct 25061 CTCGAGCGTGATGGTCTTGCCTGTGAGGGTCTTCACGAAGATCTGCAT 25014 Score = 98.7 bits (108), Expect = 1e-15 Identities = 149/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 ||||| || || | |||||| || || || |||||||| || | | || || | ||| Sbjct 25681 AGCACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCAGATAGCGTCCGGCCATCT 25622 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 || | ||||||||| || ||||||| ||||||||||| || |||||||| || || || Sbjct 25621 TCCAACTGCTTGCCAGCGAAAATGAGACGCTGCTGGTCTGGTGGAATTCCCTCCTTGTCC 25562 Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411 || || || ||| || || | || || | || || || | || | ||| Sbjct 25561 TGAATCTTAGACTTCACGTTGTCAATCGTGTCTGATGACTCGACCTCAAGCGTGATCGTC 25502 Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 ||||| ||||| || || |||||||| ||||| Sbjct 25501 TTGCCCGTCAAGGTCTTGACGAAAATCTGCAT 25470 >seq157 Length=302622 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || |||| | || || || || | || || || || || |||||||| || | Sbjct 142246 ACCACCACGCAGGCGCAGGACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGA 142305 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 || ||| || |||| || |||||||||||||| | || || ||||||||||| || || Sbjct 142306 GAGGGTACGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCTGGGGG 142365 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 ||| ||||| || || || || || ||| ||| || | || || | ||||| Sbjct 142366 AATGCCTTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCGGAAGACTCCAC 142425 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || | || | |||||||| || | || || ||||| || ||||| Sbjct 142426 CTCAAGGGTGATAGTCTTGCCCGTGAGGGTCTTCACGAAGATCTGCAT 142473 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499639154013760