Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20ampelina_20[genbank_20GCA_5F001630405.1_202016-04-25] 904 sequences; 59,495,866 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq48 286 3e-72 >seq48 Length=122101 Score = 286 bits (316), Expect = 3e-72 Identities = 1081/1673 (65%), Gaps = 50/1673 (3%) Strand=Plus/Minus Query 93717 TTACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGCAG 93776 |||| | ||||| | |||||| || || ||| ||||||||||||||| | ||||| | Sbjct 17301 TTACCAATACTTCGGCTTCAAGACACTCGAGCGTTCGTACCTCCTCAAGCTCGATGGTAA 17242 Query 93777 GGTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCACGA 93836 ||| |||||| || || || || | ||||| ||||| |||| || || |||| Sbjct 17241 AGTTGTCGAGCGGCCACAGCACATGATCATGCGTGTCGCTGTCGGTATCTGGGGAGACGA 17182 Query 93837 CATGCCGA-ATGTT--TTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTATAC-CATGG 93892 || ||| | | | ||| | || || ||| ||||| | || |||| Sbjct 17181 --TGTCGAGAGGGTCATTGAGACCTA-CAACCTGATGTCAAACAAGTTCTTCACACATG- 17126 Query 93893 CCACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGA 93952 || |||| || ||||||| || || || || ||| ||| |||| || || ||||| Sbjct 17125 CCTCCCCCACATTGTTCAATGCTGGCACTCCTCAGCCCCAGCTGTCATCATGCTTCCTCG 17066 Query 93953 T-GACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACT-GTGCGAC 94010 | ||| | |||| ||| ||| || || | |||| ||| || |||| |||| | Sbjct 17065 TCGAC-ATGAAGGAGGACAGCATTGAGGGCATCTATGACA-CCTTAAAGACTTGTGCTAT 17008 Query 94011 CATCTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTC 94070 ||||| || ||||| ||||| || | | || ||| | | ||||||| || || Sbjct 17007 GATCTCTAAGATGGCGGGTGGAATTGGTCTGAACGTGCACCGCATCCGTGCCACCGGCTC 16948 Query 94071 CTACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAA 94130 |||||| || || || || ||||| || ||| | ||| ||||| ||||||||||| Sbjct 16947 ATACATCGCTGGCACTAACGGTACCTCTAATGGCATTACCCCAATGCTGCGGGTCTTCAA 16888 Query 94131 CAACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTA 94190 |||| | || || ||||| ||||||||||| | | | ||| | ||||| |||| Sbjct 16887 CAACACCGCCCGATACGTCGACCAGGGTGGCAACAAGCGTCCCGGTGCCTTCGCTATCTA 16828 Query 94191 TCTCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAA 94250 || ||||| |||||||| || || | ||| | |||||||| ||||||||||| || Sbjct 16827 CCTTGAGCCATGGCACGCCGATGTATTCGAGTTCCTTGACCTGCGCAAGAACCACGGTAA 16768 Query 94251 CGATCTGGAGA---GGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTAT 94307 || ||||| | ||| | || || ||| || |||||| | || || ||||| || Sbjct 16767 GGA---GGAGATCCGAGCCCGTGATCTTTTCCTTGCCCTCTGGATCCCCGATCTTTTCAT 16711 Query 94308 GAAACGCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACT 94367 ||| || |||||||| ||| | ||||| || | || || || || ||||| || || Sbjct 16710 GAAGCGGGTCGAGAAGAACGGTGACTGGACCCTGATGTGCCCTAACGAGTGTCCTGGCCT 16651 Query 94368 GTCCGACGTTTGTGGATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGG-CA 94426 ||||| | || | ||||| | | || | | ||||| | |||| | Sbjct 16650 CGCCGACTGCTACGGTGAGGAGTTTGAGGCTCTCTACGAGCAGTACGAGAAGGAGGGTCG 16591 Query 94427 AGGCCAGGAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGG 94486 || | | ||| ||| | || |||||||||| || || | || | ||| | Sbjct 16590 TGGTC-GCAAGACCATGAAGGCCCAGAAGCTGTGGTATGCCATTCTCGAGGCTCAGACTG 16532 Query 94487 AGACGGGTACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGC 94546 |||| || | |||| ||| ||| ||||||| | |||| ||| ||||||| || Sbjct 16531 AGACTGGCAACCCCTTCATGCTGTACAAGGACCACGCCAACCGGAAGAGCAACCAGAAGA 16472 Query 94547 ACCTCGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGG 94606 |||| || ||| ||||| || || ||||| ||||| | ||||| || | || | Sbjct 16471 ACCTGGGTACCATCCGAAGCTCCAACCTTTGCACTGAGATCATTGAGTACTCTGCCCCAG 16412 Query 94607 ACGAGATTGCTGTGTGTAACCTGGGCTCCATCAACCTGTCCACTTTCGTGCGAGATGCCT 94666 | ||| | || ||||| ||| ||| |||||| ||| || | | || || || Sbjct 16411 ATGAGGTCGCCGTGTGCAACTTGGCCTCCATTGCTCTGCCCGCATATGT------TGACT 16358 Query 94667 AC-ACGTCTACTGCTTC--GTTCGATC---TGGAGGAGCTTGTGAACTTCGCGGGAAGGA 94720 || || | |||||| | ||| | | || | ||| || | ||| Sbjct 16357 ACGACAACAACTGCTACAACTTCCAGCAGTTGCACGAGGTTACCCAGGTCG--------- 16307 Query 94721 TGGTCTTGAACCTGAACAGGGTAATCGACAAGAACTTCTACCCCGTCCCGGAGGCGGAGA 94780 | ||| |||||||||| | | || || ||| |||||| ||| |||||| | | Sbjct 16306 TCGTCCGCAACCTGAACAAGATCATTGATGTCAACCACTACCCGGTCAAGGAGGCCTACA 16247 Query 94781 ACTCAAACCTGAAGCATCGGCCCATCGGCATCGGCGTCCAGGGTTTCGCGGACGCGCTGG 94840 || ||| || || || || || || ||||||| |||||| | || ||||| | Sbjct 16246 ACAGCAACATGCGACACCGACCTATTGGTGTCGGCGTTCAGGGTCTTGCCGACGCATTCT 16187 Query 94841 TGATGATGCGTCTGCCCTACGACTCTGTCGACGCGGCGGGTTTGAATTTGAACATATTCG 94900 || | || |||| | |||||| || || | |||| | | || |||| Sbjct 16186 TGGCACTACGCATGCCTTTCGACTCCCCGGAGGCCCGTGAGCTGAACAAGCAGATCTTCG 16127 Query 94901 AAAGCATTTATTACGGGGCCATGAAACAATCCGTCCACTTGGCCAGATCGGACGGCGGGC 94960 | | ||| || ||| ||| | | ||| || | |||| ||| ||| | Sbjct 16126 AGACCATCTACCACGCTGCCCTCACCGCATCAAGTGACATTGCCAAGGTGGAGGGC---C 16070 Query 94961 CACACGAATCGTTCCGCGGATCGCCCTTGGAACAGGGCATTTTTCAGTTCGACCTCTGGG 95020 | || | | | | || ||| | ||| ||||| | ||||||||| | ||| Sbjct 16069 CCTACAAGACATACGAGGGCAGCCCCGTCTCACAAGGCATCCTGCAGTTCGACATGTGGA 16010 Query 95021 GTGTGAAGCCCTCGGGTCTGTACGACTGGGAAGCTCTACGCGCTGATGTTATCAA--ACA 95078 ||| |||||||| | || | |||||||| || || | | || | ||||| | | Sbjct 16009 ATGTCAAGCCCTCCGACCTCTGGGACTGGGATGCGCT-CAAGGAGAAG--ATCAAGGAGA 15953 Query 95079 C-GGTGTGAAAAACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGATCC 95137 | ||||| ||| ||| | |||| || |||||||| || || ||| ||||||||| Sbjct 15952 CTGGTGTTCGCAACAGCCTGTTGCTGGCACCAATGCCCACTGCGTCGACGTCGCAGATCC 15893 Query 95138 TTGGCAACAACGAGTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCTCG 95197 | |||||||| |||| || || || | |||||||||| | ||| | | || ||||||| Sbjct 15892 TGGGCAACAATGAGTGCTTTGAGCCATACACCTCCAACATCTACCAGCGACGTGTGCTCG 15833 Query 95198 CCGGGGAATTCCCCGTCATCAACAAGCACCTCCTACGGGACCTGACGTCTCTGGGTGTGT 95257 | || || |||| ||| ||||| ||||| |||| ||||| || || ||| Sbjct 15832 CTGGCGAGTTCCAGGTCGTCAACCCTTGGCTCCTCAGGGATCTGACAGAGCTCGGCTTGT 15773 Query 95258 GGGGTGACAAGGTCAAGAACCAACTGCTACGCGCCAACGGCTCCGTCCAGAACATCCCGC 95317 || ||| | ||||||| | | || | || ||| | |||||||| || Sbjct 15772 GGTCTGAGGCCATGAAGAACCGTATCATCGCCGAGGATGGTTCCATTCAGAACATTCCTA 15713 Query 95318 AAATACCGGAGGACATCAAGGCGCTCTACAAGACCGTGTGGGAGATCCCGCAG 95370 || |||| || |||||||| |||||||||||||| ||||||||| | ||| Sbjct 15712 GCATCCCGGCTGATATCAAGGCCCTCTACAAGACCGTCTGGGAGATCTCTCAG 15660 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494717609627840