Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20ampelina_20[genbank_20GCA_5F001630405.1_202016-04-25] 904 sequences; 59,495,866 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq48 154 1e-32 seq56 138 1e-27 seq427 123 2e-23 seq157 109 5e-19 >seq48 Length=122101 Score = 154 bits (170), Expect = 1e-32 Identities = 950/1509 (63%), Gaps = 37/1509 (2%) Strand=Plus/Plus Query 153028 GGTTGACCACTTGAAACTCGCCCGCCAACACTCGTCTCAAATATACATTGCTAGTGAAAG 153087 ||||||| || || |||||||| || | ||| |||| | || | ||| ||| | | Sbjct 15809 GGTTGACGACCTGGAACTCGCCAGCGAGCACACGTCGCTGGTAGATGTTGGAGGTGTATG 15868 Query 153088 GTTCAAAGGATTCGTTATTGCCTAGTATTTGAGCCGTGGTTGCGGTCGGCATGTACGCCA 153147 | |||||| | || || ||||| || || || | ||| | || || ||||| |||| Sbjct 15869 GCTCAAAGCACTCATTGTTGCCCAGGATCTGCGACGTCGACGCAGTGGGCATTGGTGCCA 15928 Query 153148 CCAACAAAGAATTCCGCAAGCC-GTGCGCTCGAATGTCGTCCTTCAACGCCTGCCAATCC 153206 ||||| || || | || || || || || ||||| | ||| | ||| ||| Sbjct 15929 GCAACAGGCTGTTGCGAACACCAGTCTCCTTGATCTTC-TCCTTGAGCGCATCCCAGTCC 15987 Query 153207 CACAGCGCCGACGGTGTCGCGTTCCACATGTCGTACTGTAACACTCCTCGACTGGCGGGA 153266 || || | || || | | |||||||||||| |||| | | ||| | | |||| Sbjct 15988 CAGAGGTCGGAGGGCTTGACATTCCACATGTCGAACTGCAGGATGCCTTGTGAGACGGGG 16047 Query 153267 CTGCCGGCAAACGTACTGTAGCTGCCGTCGCGTTGGGCCAGTTCGCAGCTAGCCTCGAGC 153326 ||||| | | || ||||| ||| || | ||| | || | || ||| Sbjct 16048 CTGCCCTCGTATGTCTTGTAGGGGCCCTCCACCTTGGCAATGTCACTTGATGCGGTGAGG 16107 Query 153327 GCGCCATAGTATATGGTTTCGGCGATTTGTTTATTGAGA--ACGGCCGCTTCTTCGCTCT 153384 || | | ||| ||||| ||| ||| || || || || |||| || || | | Sbjct 16108 GCAGCGTGGTAGATGGTCTCGAAGATCTGCTTGTTCAGCTCACGG--GCCTCCGGGGAGT 16165 Query 153385 CGTACGGCATGCGCAGCAGCACAAAGGCGTCGGCCAGACCCTGGATACCGACGCCGATGG 153444 || | |||||||| || || || |||||||| |||||||| | ||||| || || | Sbjct 16166 CGAAAGGCATGCGTAGTGCCAAGAATGCGTCGGCAAGACCCTGAACGCCGACACCAATAG 16225 Query 153445 GTCGATGCTTCTCGTTGCTGC-----GCCTCGCGCTCGCTATGGGATAGTGATTGCGATC 153499 |||| || | ||||||| ||||| || | | || ||||| ||| ||| Sbjct 16226 GTCGGTGTCGCATGTTGCTGTTGTAGGCCTC---CTTG--ACCGGGTAGTGGTTGACATC 16280 Query 153500 GATAATTTTGTTGAGGTTGCGCACCACCACTTTAGTTATCGCCTTAAGTTTCTCGAAATC 153559 || || ||||| |||||||| || || || | || | | | | | | || ||| | Sbjct 16281 AATGATCTTGTTCAGGTTGCGGACGACGACCTGGGTAACCTCGTGCAACTGCTGGAAGTT 16340 Query 153560 ATAGGTCATTTCGTCGACGCGTACGCATCGATTCACGGCAATAGACGCCAGATTACAGAC 153619 ||| | | |||| | || || || ||||| || |||| || || || Sbjct 16341 GTAGCAGTTGTTGTCGTAGTCAACATATGCGGGCAGAGCAATGGAGGCCAAGTTGCACAC 16400 Query 153620 GGCCGTCTCTTCGGCGTCGCTGTACTGCACGATCTCGGCGCAGAGGTTGCTGCATTTTAT 153679 ||| ||| || | | | ||||| | |||||| | ||| |||||| || | || Sbjct 16401 GGCGACCTCATCTGGGGCAGAGTACTCAATGATCTCAGTGCAAAGGTTGGAGCTTCGGAT 16460 Query 153680 GACGCCCAAATTTTGCTGATTGCTTTTGCGATTGCACGCGTCTTTGAAGAGCATGTACGG 153739 | |||| || | ||| ||||| || || ||| ||| ||| | |||||| | || Sbjct 16461 GGTACCCAGGTTCTTCTGGTTGCTCTTCCGGTTGGCGTGGTCCTTGTACAGCATGAAGGG 16520 Query 153740 TCCGCCGGTCTCGACTTGCGTTTCGACGAT---AAACCTATGCAGGTCCTGCGCTCGCAC 153796 ||| ||||| || | |||| || | ||| ||| | ||| || || Sbjct 16521 GTTGCCAGTCTCAGTCTGAGCCTCGAGAATGGCATACCA---CAGCTTCTGGGCCTTCAT 16577 Query 153797 CCGCTGCCGATAGCGGCCCTCGCTCTCGTATCGCTCGTACAGTCGCTCAAACTCGTCGCC 153856 || ||| || ||||| ||||||| ||||||| || ||||||||| || || Sbjct 16578 GGTCTTGCGACCACGACCCTCCTTCTCGTACTGCTCGTAGAGAGCCTCAAACTCCTCACC 16637 Query 153857 GTAGCAGTCGGCGAGGCCGGGACACTGATGCGGACACATCAGCGACCACATATCGTCGGC 153916 |||||||||||||||||| ||||||| | || |||||||| | ||| | ||| Sbjct 16638 GTAGCAGTCGGCGAGGCCAGGACACTCGTTAGGGCACATCAGGGTCCAGTCACCGTTCTT 16697 Query 153917 GTTGACGCGTCGCATGAACAGATCCGGCACCCAGAGCGCGTACATGAGGTCGCGCGCCTT 153976 | ||| || |||||| ||||| || | |||||| || | || || || || Sbjct 16698 CTCGACCCGCTTCATGAAAAGATCGGGGATCCAGAGGGCAAGGAAAAGATCACGGGCTCG 16757 Query 153977 GCAATCCTCC---GCGCCCATGTTGCGTTTCAGATTGA-GCACGCTATAGATGTCGGCGT 154032 | |||||| || | ||||| ||| | | | || | | | | ||||||| Sbjct 16758 GATCTCCTCCTTACCGTGGTTCTTGCG---CAGGTCAAGGAACTCGA-ATACATCGGCGT 16813 Query 154033 GCCAGGGTTCAATGTAGACGGCCAGGGCACCTTTACGC---TTTCCGCCCTGATCGACGT 154089 |||| || |||| ||||| || | |||||| |||| || || ||||| ||||||| Sbjct 16814 GCCATGGCTCAAGGTAGATAGCGAAGGCACCGGGACGCTTGTTGCCACCCTGGTCGACGT 16873 Query 154090 GGCGCACCATATTGTTGAAGACGCGCACCATGGGTTCCAGGCCGCTTGCGGTGCCGTTGG 154149 || | | ||||||||||| |||| ||| || | ||| | | ||| ||||| | Sbjct 16874 ATCGGGCGGTGTTGTTGAAGACCCGCAGCATTGGGGTAATGCCATTAGAGGTACCGTTAG 16933 Query 154150 TCGAATTGATCTTGCTGCCGCGGGCGCGCACTTGATGCACGTTAACGCCAATGCC-GCCG 154208 | | ||| | |||| ||| || | | |||||||| | ||||| || ||| Sbjct 16934 TGCCAGCGATGTATGAGCCGGTGGCACGGATGCGGTGCACGTTCAGACCAATTCCACCCG 16993 Query 154209 CCGTACTTTGATATGGCAGCGC-AGTCGCCCAGCGTCCTGTAGATGCCGTCGATGCTATC 154267 || | ||| || || ||| | |||| || || |||||||| || ||||| || Sbjct 16994 CCAT-CTTAGAGATCATAGCACAAGTCTTTAAG-GTGTCATAGATGCCCTCAATGCTGTC 17051 Query 154268 GTCGCGGACGCCGAGCAAGAAACACGAACACATTTGCGGAATGCGCGTTCCCGCCGAAAA 154327 || | | ||| | ||| || || ||| || || | || || || || Sbjct 17052 CTCCTTCATGTCGACGAGGAAGCATGATGACAGCTGGGGCTGAGGAGTGCCAGCATTGAA 17111 Query 154328 GAGGGTGGGACTCGCGTGCGTAAACAGTTTTTGGCTCATCATGCGGTACGTTTCGATGGC 154387 | ||||| || || || || | || | ||||| | ||| || || ||| | Sbjct 17112 CAATGTGGGGGAGGCATGTGTGAAGAACTTGTTTGACATCAGGTTGTAGGTCTCAATGAC 17171 Query 154388 GTCTTCGATATCATCGCCGTGAATGCCGAGCGCGACGCGCATGAGCATGTGCTGCGGACG 154447 |||| ||| || || || |||| ||||| ||||||| ||||||||| || || Sbjct 17172 CCTCTCGACATCGTCTCCCCAGATACCGACAGCGACACGCATGATCATGTGCTGTGGCCG 17231 Query 154448 TTCGGCGACTCTATTGTCAATCTTCAAGAGATATCCATTTTCGAGGGTTTTGTAACCGAA 154507 ||| | ||| || || | ||| | ||| || | ||||| || ||| | ||||| Sbjct 17232 CTCGACAACTTTACCATCGAGCTTGAGGAGGTACGAACGCTCGAGTGTCTTGAAGCCGAA 17291 Query 154508 ATACTTGTA 154516 || | ||| Sbjct 17292 GTATTGGTA 17300 >seq56 Length=117397 Score = 138 bits (152), Expect = 1e-27 Identities = 349/517 (68%), Gaps = 13/517 (3%) Strand=Plus/Minus Query 52326 GTGCCGTGCGTTCGCAAAAAGGCTCAGTGGGCAATGAAGTGGATCGAG-AGCGACACCGC 52384 || |||||| | ||||| ||||| | ||||| | ||||||||| || | || | | Sbjct 53564 GTCCCGTGCATCCGCAAGAAGGCCGACTGGGCTCTCAAGTGGATCCAGGATCGCGAGT-C 53506 Query 52385 CACGCTGGCCGAGCGCATGGTGGCCTTCGCCATAGTCGAGGGCGTGtttttttCCGGCAG 52444 ||| ||| |||| |||| |||||||| ||||||||| | || || |||| Sbjct 53505 CACCTATGCCCAGCGACTGGTTGCCTTCGCTGCCGTCGAGGGCATCTTCTTCAGCGGCGC 53446 Query 52445 CTTTGCCGCCATCTTTTACATTAAAACGAAAGGCATAATGCCCGGCCTGACGTTCAGCAA 52504 || ||| |||| || | | || | | ||| | ||||| |||||||| ||| ||| Sbjct 53445 ATTCGCCTCCATTTTCTGGCTCAAGAAGCGTGGCCTCATGCCTGGCCTGACCTTCTCCAA 53386 Query 52505 CGAGTTGATATCGCGCGACGAAGGACTGCACACGGACTTTGCGTGCCTCTACTACAAG-A 52563 |||| | || || || || || || |||||||| ||||| || || ||| | | | Sbjct 53385 CGAGCTCATTTCTCGTGATGAGGGTCTGCACACCGACTTCGCCTGTCTCCTGTTCTCTCA 53326 Query 52564 CGCGCGTGACCGAAAAATTGGATTCGGACACGATCCTGAGCATGTTCAAGGAGGCGGTGG 52623 | | | |||| || | | | | | | || | ||| ||| ||||| || | Sbjct 53325 CCTGAGGAACCGTCCAA--GCAAGCAG-CGTG-TCGAGGACATCATCACCGAGGCCGTCG 53270 Query 52624 CTATCGAAAAGGAGTTTTTTACGGCCGCGCTGCCGGTCGAGCTGCTGGGCATGAACGCGC 52683 | ||||| |||||||| || || | || ||||| || || || ||||||||| | Sbjct 53269 CCATCGAGAAGGAGTTCTTGACTGAGGCTCTGCCATGCGCCCTCCTCGGCATGAACTCCA 53210 Query 52684 AGTCCATGTGCGAGTACATCGAGTTTGTGGCGGATCGTCTGTTGGTGCAGCTC-GGGCAG 52742 | |||| |||||||||||||||| || || ||||| |||| |||| ||||| Sbjct 53209 ACCTCATGAAGCAGTACATCGAGTTTGTTGCCGACCGTCTCCTGGT--CGCTCTGGGCAA 53152 Query 52743 CCA-AAGTACTTCAACGC-TCGCAATCCGTTTGAGTTTATGAACAACATTTCGCTTGAGG 52800 | | ||| | ||| | ||| || || || || || ||| | ||||| || || | | Sbjct 53151 CGAGAAGGTTTACAAGTCGTCG-AACCCCTTCGACTTCATGGAGAACATCTCTCTCGGTG 53093 Query 52801 GCAAGACCAACTTTTTCGAGAAGCGAGTCGGCGAGTA 52837 ||||||||||||| || |||||||| ||||| || || Sbjct 53092 GCAAGACCAACTTCTTTGAGAAGCGTGTCGGTGACTA 53056 >seq427 Length=29395 Score = 123 bits (136), Expect = 2e-23 Identities = 167/230 (73%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 ||||| || | ||| | || | ||| | | | |||||||||||||||||||||||| Sbjct 25240 CCGCCACGAAGACGGAGGACGAGATGGAGGGTAGACTCCTTTTGAATGTTGTAGTCGGAG 25181 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || || |||||||||||| || |||| | |||| |||||||| ||||| || || Sbjct 25180 AGGGTGCGGCCGTCCTCGAGTTGCTTGCCGGCAAAGATAAGACGCTGCTGGTCAGGGGGG 25121 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATTGTTCCACGGTGTCGGTCGACTCCAC 138566 || || || ||||| ||| || || | |||| || | ||| |||| ||||| || Sbjct 25120 ATGCCCTCCTTGTCTTGGATCTTGGACTTGACATTG-TCGATGGTATCGGAGGACTCGAC 25062 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATGG 138616 ||||| ||| | || || || || || || || || || |||||||||| Sbjct 25061 CTCGAGCGTGATGGTCTTGCCTGTGAGGGTCTTCACGAAGATCTGCATGG 25012 Score = 96.9 bits (106), Expect = 3e-15 Identities = 140/195 (72%), Gaps = 2/195 (1%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 || ||||| ||||||||||||||| | || || |||||| || || || || | Sbjct 25435 GATTCCTTCTGAATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCAAGCTGCTTTCCAGCG 25376 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA-A 138539 |||| |||||||| ||||| || || ||||| || ||||| ||| || || | | Sbjct 25375 AAGATCAGACGCTGCTGGTCTGGGGGGATACCCTCCTTGTCCTGGATCTTGGACTTGACA 25316 Query 138540 TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTT 138599 |||| | | ||| || | ||||| ||||||| || | || || ||||||||||| || Sbjct 25315 TTGT-CGATGGTATCAGAGGACTCGACCTCGAGGGTAATGGTCTTGCCAGTCAGAGTCTT 25257 Query 138600 TACAAAAATCTGCAT 138614 || || |||||||| Sbjct 25256 GACGAAGATCTGCAT 25242 >seq157 Length=302622 Score = 109 bits (120), Expect = 5e-19 Identities = 163/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || |||| |||| || | || | | | |||||||| || |||||||||||| Sbjct 142247 CCACCACGCAGGCGCAGGACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAG 142306 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | ||||| ||||||||| || || |||| |||| |||||||| ||||| || || Sbjct 142307 AGGGTACGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCTGGGGGA 142366 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATTGTTCCACGGTGTCGGTCGACTCCAC 138566 || ||||| ||||| ||| || || | |||| || | |||||||| |||||||| Sbjct 142367 ATGCCTTCCTTGTCCTGGATCTTGGACTTGACATTG-TCGATGGTGTCGGAAGACTCCAC 142425 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATG 138615 ||| | || | || || || || || || || || || ||||||||| Sbjct 142426 CTCAAGGGTGATAGTCTTGCCCGTGAGGGTCTTCACGAAGATCTGCATG 142474 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496256792234880