Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20ampelina_20[genbank_20GCA_5F001630405.1_202016-04-25] 904 sequences; 59,495,866 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq48 196 6e-45 >seq48 Length=122101 Score = 196 bits (216), Expect = 6e-45 Identities = 1154/1822 (63%), Gaps = 63/1822 (3%) Strand=Plus/Plus Query 115526 TGAACTGAATGGGTCTCGCCTTGGCCTTTGATCGGAGGTAGTACATCCCCGTCTTGAGCC 115585 ||||||| |||||| || |||| | |||||||||||||| || |||||||| | Sbjct 15473 TGAACTGGATGGGTGCGGCAGCTGCCTGAGTGCGGAGGTAGTACATGCCAGTCTTGAGAC 15532 Query 115586 CCTGCTTCCAGGCATACATATGCATTGAGGACAACTTGGAGAGTGTTGGACTTTC-CATG 115644 | |||||||| | | ||||| || | |||| | | ||| || | |||| Sbjct 15533 CGAGCTTCCAGCCGGCGAAGTGCATGCTGGTGATCTTGCCCATGGATGG-CTCCCTCATG 15591 Query 115645 AAGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCCCGATCCGCCGCCATATCAATC 115704 || ||| | | || || ||||| |||||| || || || || ||||| | | Sbjct 15592 TGGATGTTGAGAGACTGAGACTGATCAATGAAGGCACCACGGTCAGCAGCCATCTG---C 15648 Query 115705 ACATCCTTCATCTT---GATTTCCCACACAGTTCTGTAGAGGTTCTTAATATCATCTGGG 115761 ||| || ||| ||| ||||| || || |||||||| ||| |||||| | ||| Sbjct 15649 ACAATGGTCCTCTGAGAGATCTCCCAGACGGTCTTGTAGAGGGCCTTGATATCAGCCGGG 15708 Query 115762 ATATCCACGA-TATTTTGGATAGAGCCACCTGCCTTGACCATGAGA---TCCTTCATATC 115817 || | | || | || || || || ||| | || | | |||| | | |||||| | Sbjct 15709 ATG-CTAGGAATGTTCTGAATGGAACCATC---CTCGGCGATGATACGGTTCTTCATGGC 15764 Query 115818 CTTTGACCAGAGACCAATCTTCTTGAGATCCTCCACGAGGTGCTTA---TTGACAACAAC 115874 || ||||| | || | || | |||||| |||| || | ||||| || Sbjct 15765 CTCAGACCACAAGCCGAGCTCTGTCAGATCCCT---GAGGAGCCAAGGGTTGACGACCTG 15821 Query 115875 AAACTCACCCGCGAGGGTGCGTCTCAGATAGATGTTGGTCGTGTATGGCTCAAAGCACTC 115934 ||||| || ||||| |||| | | |||||||||| |||||||||||||||||||| Sbjct 15822 GAACTCGCCAGCGAGCACACGTCGCTGGTAGATGTTGGAGGTGTATGGCTCAAAGCACTC 15881 Query 115935 ATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTT 115994 |||||| |||| ||| || | || || || |||||||| ||||||| | |||||||| Sbjct 15882 ATTGTTGCCCAGGATCTGCGACGTCGACGCAGTGGGCATTGGTGCCAGCAACAGGCTGTT 15941 Query 115995 GCGGAGACCCACCCCCCTAATGCGTTCCTTGAGGGCGTCCCAGTCGTAGTTGAGCTTTGT 116054 ||| | ||| | || | || |||||||| || |||||||| || | | Sbjct 15942 GCGAACACCAGTCTCCTTGATCTTCTCCTTGAGCGCATCCCAGTCCCAGAGGTCGGAGGG 16001 Query 116055 CTCCCCCTCCCACATATCAAACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGT 116114 || | | |||||| || ||||| ||||| ||||| || | || ||||| |||| Sbjct 16002 CTTGACATTCCACATGTCGAACTGCAGGATGCCTTGTGAGACGGGGCTGCCCTCGTATGT 16061 Query 116115 CTCATATGGGCCCTCAACCTCCGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACAT 116174 || || |||||||| |||| || | || || |||||| ||||| || || Sbjct 16062 CTTGTAGGGGCCCTCCACCTTGGCAATGTCACTTGATGCGGTGAGGGCAGCGTGGTAGAT 16121 Query 116175 TGTCTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGACG--G 116232 ||||| || || | |||| | |||||| ||| || || | | || | Sbjct 16122 GGTCTCGAAGATCTGCTTGTTCAGCTCACGGGCCTCCGGGGAGTCGAAAGGCATGCGTAG 16181 Query 116233 CACAAAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATA 116292 | || ||| | || || ||||| || || |||| ||||| || || |||| ||| Sbjct 16182 TGCCAA--GAATGCGTCGGCAAGACCCTGAACGCCGACACCAATAGGTCGGTGTCGCATG 16239 Query 116293 TTAGACTTTCGAGCGGTCTCC---ACGGGATAAAAATTCCTATCGATAACCCTATTTAGA 116349 || || | | || |||| || || || || ||| || | | | || || Sbjct 16240 TT--GCTGTTG-TAGGCCTCCTTGACCGGGTAGTGGTTGACATCAATGATCTTGTTCAGG 16296 Query 116350 TTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCT 116409 || | ||| |||| || | || || | || | | | | | | | | || Sbjct 16297 TTGCGGACGACGACCTGGGTAACCTCGTGCAACTGCTGGAAGTTGTAGCAGTTGTTGTCG 16356 Query 116410 TCATTGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTA 116469 | | ||||| || || || || || |||| || ||||| | | |||||| Sbjct 16357 TAGTCAACATATGCGGGCAGAGCAATGGAGGCCAAGTTGCACACGGCGACCTCATCTGGG 16416 Query 116470 TCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTT 116529 ||| |||||| || || || || || | || || || ||||| |||| |||||| Sbjct 16417 GCAGAGTACTCAATGATCTCAGTGCAAAGGTTGGAGCTTCGGATGGTACCCAGGTTCTTC 16476 Query 116530 TGATTTGACTTTGTGTTACACGCATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTT 116589 || || ||| ||| |||||||| ||||| | || | || ||||| || Sbjct 16477 TGGTTGCTCTTCCGGTTGGCGTGGTCCTTGTACAGCATGAAGGGGTTGCCAGTCTCAGTC 16536 Query 116590 TGGGACTTGAGAATAGCCTTCCATA-CATCGGCGGCTGGCACAGTGGCGTTG---GCTCG 116645 || | || |||||| || | ||| | | || | ||| || ||| ||| | || Sbjct 16537 TGAGCCTCGAGAATGGCATACCACAGCTTCTG-GGCCTTCA---TGGTCTTGCGACCACG 16592 Query 116646 CCCCTCCTCCTCGTACTTTGTGTAGAGGGCCTCAAACTCTTCACCCACAGC-CTCTGAGA 116704 ||||||| |||||||| |||||| ||||||||||| ||| || ||| || | || Sbjct 16593 ACCCTCCTTCTCGTACTGCTCGTAGAGAGCCTCAAACTCCTCA-CCGTAGCAGTCGGCGA 16651 Query 116705 GCCCTGGTGCCTTATCTGGACAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCA 116764 | || || || | || || | || | ||| | ||| || ||| |||||||||| Sbjct 16652 GGCCAGGACACTCGTTAGGGCACATCAGGGTCCAGTCACCGTTCTTCTCGACCCGCTTCA 16711 Query 116765 TGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCC 116824 |||| || || ||||||||||| || ||| ||||| || || || || | | Sbjct 16712 TGAAAAGATCGGGGATCCAGAGGGCAAGGAAAAGATCACGGGCTCGGATCTCCTCCTTAC 16771 Query 116825 CCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACA 116884 | || || |||| || | || || | | ||| |||||||| || || ||||| | Sbjct 16772 CGTGGTTCTTGCGCAGGTCAAGGAACTCGAATACATCGGCGTGCCATGGCTCAAGGTAGA 16831 Query 116885 CCGCGATTGACCCCTTGCGACG------ACCAGCCTGGTTTACATACCTCGCCGTTGCGT 116938 |||| | || | |||| ||| |||||| || || | || || || Sbjct 16832 TAGCGAAGGCACC---GGGACGCTTGTTGCCACCCTGGTCGACGTATCGGGCGGTGTTGT 16888 Query 116939 TAAATACGCGAAGCATTGGAATGATACCATCAGATTGGCCATTTGT-CCCCCGA-ATACG 116996 | || || || |||||||| | || |||| ||| || || || || ||| || | Sbjct 16889 TGAAGACCCGCAGCATTGGGGTAATGCCATTAGAGGTACCGTTAGTGCCAGCGATGTATG 16948 Query 116997 AGACTTGTTGGCTCTGACATCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGAT 117056 || | | |||| | || ||| | || || |||||| || || ||| ||| ||||| Sbjct 16949 AGCC--GGTGGCACGGATGCGGTGCACGTTCAGACCAATTCCACCCGCCATCTTAGAGAT 17006 Query 117057 TTGTGCGCACTCCGTGAGACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGAT 117116 || || | | | || | ||||| || || || ||| |||| | ||| Sbjct 17007 CATAGCACAAGTCTTTAAGGTGTCATAGATGCCCTCAATGCTGTCCTCCTTCATGTCGAC 17066 Query 117117 GAGGAAGCAGCTCGACATTTGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGC 117176 ||||||||| |||| || ||| || || ||||| ||||| | || || | || Sbjct 17067 GAGGAAGCATGATGACAGCTGGGGCTGAGGAGTGCCAGCATTGAACAATGTGGGGGAGGC 17126 Query 117177 GTGGATGAACATACCT-TGGGACATCTTATCGTAGGTCTCCAAGAC---AGAGGGAATGT 117232 || |||| | || | | |||||| | ||||||||| | ||| | | || Sbjct 17127 ATGTGTGAAGA-ACTTGTTTGACATCAGGTTGTAGGTCTCAATGACCCTCTCGACATCGT 17185 Query 117233 CTTCCCCGTGAATACCGATTGAGACCCGCATAAACATGTATTGGGGTGTTTCCATCAGGA 117292 || ||| | ||||||| | ||| ||||| | ||||| || || || | | Sbjct 17186 CTCCCCAG---ATACCGACAGCGACACGCATGATCATGTGCTGTGGCCGCTCGACAACTT 17242 Query 117293 TACCATCGAGCCTCTGGAGGTA 117314 ||||||||||| | ||||||| Sbjct 17243 TACCATCGAGCTTGAGGAGGTA 17264 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613500267368640