Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20ampelina_20[genbank_20GCA_5F001630405.1_202016-04-25] 904 sequences; 59,495,866 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq48 129 9e-25 >seq48 Length=122101 Score = 129 bits (142), Expect = 9e-25 Identities = 405/610 (66%), Gaps = 18/610 (3%) Strand=Plus/Plus Query 203839 CTTGTCCACCGTGAACTGAATGGCGTTCACGGCAG--GCCTGCTT-CTCAGATAGTACAT 203895 || ||| || |||||||| |||| || | ||||| ||||| | | || |||||||| Sbjct 15462 CTGGTCGACAGTGAACTGGATGG-GTGC--GGCAGCTGCCTGAGTGCGGAGGTAGTACAT 15518 Query 203896 GCCGGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTT 203955 ||| ||||| || || || ||| ||| | ||||||| | | |||| || | Sbjct 15519 GCCAGTCTTGAGACCGAGCTTCCAGCCGGCGAAGTGCATGCTGGTGATCTTGCCCATGGA 15578 Query 203956 GGGGTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCC-CGATCTG 204014 || || |||||| ||||| |||||||| || || ||| ||||| || || || | Sbjct 15579 TGGCTCCCTCATGTGGATGTTGAGAGACTGAGACTGATCAATG-AAGGCACCACGGTCAG 15637 Query 204015 CGGCCATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTGAACACGTCTCTGG 204074 | ||||| | | ||||||| |||| || |||||||| || |||||| | | | | || Sbjct 15638 CAGCCATCTGCACAATGGTCCTCTGAGAGATCTCCCAGACGGTCTTGTAGAGGGCCTTGA 15697 Query 204075 TGTGTTGAGGCACATCTTCCCACGTCCTG-ATCGAGCCGTTGTCGGCCATCAGTCTCATC 204133 | | || | || | || ||| || || || | ||||| || | | || Sbjct 15698 TATCAGCCGGGA-TGCTAGGAATGTTCTGAATGGAACCATCCTCGGCGATGATACGGTTC 15756 Query 204134 CTCGTCTCCTCCCCCCACATGCCCAAC-CTGATCAGCTCCCGCACCAGGTGGGGGTTGAT 204192 || | |||| ||||| ||| | | ||| |||| |||| | || ||||||| Sbjct 15757 TTCATGGCCTCAGACCACAAGCCGAGCTCTG-TCAGATCCCTGAGGAGCCAAGGGTTGAC 15815 Query 204193 GATCTGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTTCGAA 204252 || ||| || || || | ||||| | ||| | | | |||| |||| |||| || || Sbjct 15816 GACCTGGAACTCGCCAGCGAGCACACGTCGCTGGTAGATGTTGGAGGTGTATGGCTCAAA 15875 Query 204253 CGCCTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGCAG 204312 ||| |||||||| | ||||| | || || |||||||| || ||||| | ||| Sbjct 15876 GCACTCATTGTTGCCCAGGATCTGCGACGTCGACGCAGTGGGCATTGGTGCCAGCAACAG 15935 Query 204313 GGAGTTGCGCACACC-GTATTTTTGGACCCTGCGCTTCAGAGAGGTCCAGTCGTGCA--T 204369 | |||||| ||||| || | || || | | ||| || | |||||| | | Sbjct 15936 GCTGTTGCGAACACCAGTCTCCTT-GATCTTCTCCTTGAGCGCATCCCAGTCCCAGAGGT 15994 Query 204370 CGCACTGGGTTTCACGCCCCACATGTCGAACTGAAAGATGCCTTGACTGACTGGGCTGCC 204429 || | ||| || || ||||||||||||||| | ||||||||| ||| |||||||| Sbjct 15995 CGGA--GGGCTTGACATTCCACATGTCGAACTGCAGGATGCCTTGTGAGACGGGGCTGCC 16052 Query 204430 CTTGTACGTC 204439 || ||| ||| Sbjct 16053 CTCGTATGTC 16062 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795146214746240