Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20ampelina_20[genbank_20GCA_5F001630405.1_202016-04-25] 904 sequences; 59,495,866 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq427 156 1e-32 seq157 132 1e-25 seq230 102 2e-16 >seq427 Length=29395 Score = 156 bits (172), Expect = 1e-32 Identities = 160/209 (77%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || || ||||| || ||||||||||| |||| ||||||||||| | |||| |||||| Sbjct 25681 AGCACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCAGATAGCGTCCGGCCATCT 25622 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 |||| |||||| || ||||| ||||||||||||||||| || |||||| || ||| Sbjct 25621 TCCAACTGCTTGCCAGCGAAAATGAGACGCTGCTGGTCTGGTGGAATTCCCTCCTTGTCC 25562 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 |||||||| ||||||| || | ||||||| || || || || | |||||||||| Sbjct 25561 TGAATCTTAGACTTCACGTTGTCAATCGTGTCTGATGACTCGACCTCAAGCGTGATCGTC 25502 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || ||||| | || || || ||||| || Sbjct 25501 TTGCCCGTCAAGGTCTTGACGAAAATCTG 25473 Score = 105 bits (116), Expect = 2e-17 Identities = 154/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | ||||| || ||||| || ||||||||||| | ||||||||| | | || Sbjct 25234 CGAAGACGGAGGACGAGATGGAGGGTAGACTCCTTTTGAATGTTGTAGTCGGAGAGGGTG 25175 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | || || || || ||||| ||||| ||||| |||||||||||||| || || || Sbjct 25174 CGGCCGTCCTCGAGTTGCTTGCCGGCAAAGATAAGACGCTGCTGGTCAGGGGGGATGCCC 25115 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || || || ||||| ||| || |||| ||| || | | || || || | | Sbjct 25114 TCCTTGTCTTGGATCTTGGACTTGACATTGTCGATGGTATCGGAGGACTCGACCTCGAGC 25055 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| ||||| || ||||| || ||||| || || || Sbjct 25054 GTGATGGTCTTGCCTGTGAGGGTCTTCACGAAGATCTG 25017 Score = 98.7 bits (108), Expect = 2e-15 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| ||||| ||||| || ||||| || | ||||||||| | | || | || || Sbjct 25453 AGGACCAGGTGAAGAGTGGATTCCTTCTGAATGTTGTAGTCGGAGAGGGTGCGGCCGTCC 25394 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || ||||||||||| |||||||| |||||||||||||| || || || || ||| Sbjct 25393 TCAAGCTGCTTTCCAGCGAAGATCAGACGCTGCTGGTCTGGGGGGATACCCTCCTTGTCC 25334 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| ||| || |||| ||| || | | || || || | || || ||| Sbjct 25333 TGGATCTTGGACTTGACATTGTCGATGGTATCAGAGGACTCGACCTCGAGGGTAATGGTC 25274 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || ||||| || || || || || Sbjct 25273 TTGCCAGTCAGAGTCTTGACGAAGATCTG 25245 >seq157 Length=302622 Score = 132 bits (146), Expect = 1e-25 Identities = 160/218 (73%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 || || | |||||| ||||| || || |||||||| |||| ||||||||| | | || Sbjct 142253 CGCAGGCGCAGGACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTA 142312 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | || || || |||||||| ||||||||||| |||||||||||||| || ||| ||| Sbjct 142313 CGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCTGGGGGAATGCCT 142372 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || ||||| ||||| ||| || |||| |||||| | | || || || | Sbjct 142373 TCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCGGAAGACTCCACCTCAAGG 142432 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| ||||| |||||||| || ||||| || || || Sbjct 142433 GTGATAGTCTTGCCCGTGAGGGTCTTCACGAAGATCTG 142470 >seq230 Length=63387 Score = 102 bits (112), Expect = 2e-16 Identities = 131/181 (72%), Gaps = 0/181 (0%) Strand=Plus/Plus Query 199440 CCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCGGCGAAGA 199499 |||| |||| ||||||||| | || || | ||||| || |||||||| |||||||||| Sbjct 45657 CCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCCTCAAGCTGCTTGCCGGCGAAGA 45716 Query 199500 TGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTTCACGGATT 199559 | | ||||||||||| || ||| || || ||||| ||||| ||| ||| | Sbjct 45717 TCAATCGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGT 45776 Query 199560 CGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGTTTTCACAA 199619 ||| |||||| | | || || || | ||||| ||||| ||||| || || ||||| | Sbjct 45777 CGATGGTGTCAGAGGACTCCACCTCAAGGGTGATAGTCTTGCCCGTCAGGGTCTTCACGA 45836 Query 199620 A 199620 | Sbjct 45837 A 45837 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178907945140568