Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20ampelina_20[genbank_20GCA_5F001630405.1_202016-04-25] 904 sequences; 59,495,866 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq352 279 7e-70 seq123 100 4e-16 seq31 93.3 5e-14 >seq352 Length=41251 Score = 279 bits (308), Expect = 7e-70 Identities = 475/686 (69%), Gaps = 6/686 (1%) Strand=Plus/Plus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 ||||| || |||||||||| ||| || || || ||||| | || || || |||||||| Sbjct 3510 TCGAAGTCCTCACCACCCAGGTGAGTGTCACCGGCGGTGGACTTAACCTCGAAGATACCC 3569 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 | || ||| | | | ||| ||||| || |||||||||||||| || || || || ||| Sbjct 3570 TCCTCGATGGTCAGGAGCGAGACATCGAAAGTACCACCACCCAGATCGAAGATCAGAACG 3629 Query 7577 TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636 || ||| | || ||||| |||||||| || || || ||||| || || || || Sbjct 3630 TTGCGCTCGCCCTCGACCTTCTTGTCGAGACCATAGGCAATGGCCGCGGCAGTAGGCTCG 3689 Query 7637 TTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGT 7696 || || ||||| ||| ||||||||||||||| | || || || || ||||| || Sbjct 3690 TTGATGATACGCAGAACGTTCAGGCCAGCAATGAGACCAGCGTCCTTGGTGGCTTGACGC 3749 Query 7697 TGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGA 7756 || || ||||| |||||||| ||||| || | ||| |||| |||| | ||| || Sbjct 3750 TGAGAGTCGTTGAAGTAGGCGGGGACAGTGATGACAGCGTTGTTGACGGTGCCACCCAGG 3809 Query 7757 TACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCA 7816 || || || ||| | || ||| ||||| || ||||| || |||||||| || | | Sbjct 3810 TAGGACTCAGCGGTCTCACGCATCTTGGTGAGGACCATGGAGGAAATCTCCTCTGGGGTG 3869 Query 7817 AACTGTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCGGGG 7876 || || || || || || || ||||| || || |||| || |||| | | Sbjct 3870 AAGGTCTTGGTCTCGCCCTTGAACTCAACCTCGATGTTGGGCTT-GCCGC--CCTTCTCG 3926 Query 7877 ATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCTT 7936 || | ||| | | | | ||||| ||| | ||||| | |||| ||||| | Sbjct 3927 ATGATCTTGAAGGGGAAGTGCTTCATGTCGGCCTGGACTTCAGAGTCCTGGAACTTGCGG 3986 Query 7937 CCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTC 7996 || || | ||||| ||||| || || ||||| | |||||||||||| |||||||| Sbjct 3987 CCAATCAACCGCTTCGCATCGAAGACGGTGTTGTGGGGGTTCATGGCGACCTGGTTCTTG 4046 Query 7997 GCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTT 8056 || || || ||||| ||||| || | | || || || |||||| | || ||||| || Sbjct 4047 GCGGCATCTCCGATCAGACGCTC---AGTGTCGGTGAAAGCGACGAAGGAAGGGGTGGTC 4103 Query 8057 CGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCAC 8116 || || || |||||||| || || || || | |||||| | | |||| || || || Sbjct 4104 CGGTTTCCCTGGTCGTTTGCGATGATCTCAATGCGGTCATCACGGAAGACACCCACACAA 4163 Query 8117 GAATACGTTGTTCCTAAATCAATACC 8142 || || || || || ||||||||||| Sbjct 4164 GAGTAGGTGGTACCCAAATCAATACC 4189 >seq123 Length=89108 Score = 100 bits (110), Expect = 4e-16 Identities = 234/353 (66%), Gaps = 0/353 (0%) Strand=Plus/Minus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 ||||| || |||||||| | || || || || || || || ||| || |||| || Sbjct 24698 TCGAAGTCCTCACCACCAAGATGGGTGTCACCGGCAGTAGCCAAGACCTCGAAGACGCCC 24639 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 || || | || || ||||| || ||||||||||| || || | | || | Sbjct 24638 TGGTCGATAGAGAGCAGGGACACATCGAAGGTACCACCACCAAGATCGTAGACGATGATC 24579 Query 7577 TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636 | ||| | || | | |||| || |||||||| |||||||| || ||||| || || Sbjct 24578 TGACGCTCGCCCTCCTCGGTCTTGTCCAGACCGTATGCGATAGCAGCGGCCGTGGGCTCG 24519 Query 7637 TTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGT 7696 || | |||||| || ||| || || || ||| | | ||||| || || || || || Sbjct 24518 TTGACAATACGGAGGACGTTGAGACCGGCGATAATGCCGGCATCCTTGGTAGCCTGGCGC 24459 Query 7697 TGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGA 7756 || ||||| || || || ||||| || || || |||| ||||| |||| ||||| Sbjct 24458 TGGTTGTCGTTGAAATACGCGGGGACGGTAACAACGGCGTGGGTGACCTTCTCGCCGAGG 24399 Query 7757 TACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTC 7809 || || || | || ||||| ||| || | ||| | || ||||| || Sbjct 24398 TAGTTCTCGGCCACTTCCTTCATCTTGCCCAGGATCATGGCGGAGATCTCCTC 24346 >seq31 Length=128686 Score = 93.3 bits (102), Expect = 5e-14 Identities = 175/251 (70%), Gaps = 10/251 (4%) Strand=Plus/Plus Query 7243 CAGTTCCTCAAAACGTGCACGGGTAAT--GGATGTATAGAAATCAACGCCGTCGTATAAC 7300 ||| ||||| ||||| |||||||| || | |||| |||||| | |||||| | | Sbjct 709 CAGGTCCTCGAAACGAGCACGGGTGATCTGCATGTT--GAAATCCTCTCCGTCGAACAGG 766 Query 7301 GAATCAATTTCAATGGTTGTTTGTGC--CGTCGAAGATAACGTTCGCTTTGCGCGCTCAC 7358 || ||||| ||||| || | || || || | || | || ||||| || ||||| | Sbjct 767 GAGTCAATCTCAATAGTGGCCTGAGCACCGCTG--GACAGGGTACGCTTGGCACGCTCGC 824 Query 7359 ACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTAC 7418 | || || || | ||| || |||||||| | || |||||||| ||| ||||| || | Sbjct 825 AAGCAGTCCGGAGACGGCGGAGGGCACGGGCGTCACCGGAAAGATCCTTCTTGGTCTTGC 884 Query 7419 GTTTAAACTCTTCAGAGAAGTG-TCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAG 7477 | || ||||| | | |||| |||| |||| | | || || || | |||||||||| Sbjct 885 GGTTGAACTCCTTCTTGCAGTGGTCGA-GGAGGTTGGTGTCAAAGTCCTGACCACCCAAG 943 Query 7478 TGTGTATCCCC 7488 || || || || Sbjct 944 TGGGTGTCACC 954 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635125622999360