Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20ampelina_20[genbank_20GCA_5F001630405.1_202016-04-25] 904 sequences; 59,495,866 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq48 264 1e-65 seq56 102 1e-16 >seq48 Length=122101 Score = 264 bits (292), Expect = 1e-65 Identities = 1144/1783 (64%), Gaps = 57/1783 (3%) Strand=Plus/Minus Query 111612 CCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGTT 111671 |||||| ||||| ||||||| ||||| |||||||| || || ||| | || || Sbjct 17228 CCACAGCACATGATCATGCGTGTCGCTGTCGGTATCTGGGGAGACGATGTCGAGAGGGTC 17169 Query 111672 TTGGAGACATACGACAAGATGTCCCGTGGTATGTTCATCCACGCAACACCAACCCTCTTC 111731 | ||||| ||| || |||||| | |||| || || | || || | ||| Sbjct 17168 ATTGAGACCTACAACCTGATGTCAAACAAGTTCTTCACACATGCCTCCCCCACATTGTTC 17109 Query 111732 AACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGGAT 111791 || ||||| || || ||||| |||| || ||||| | | | |||||||| Sbjct 17108 AATGCTGGCACTCCTCAGCCCCAGCTGTCATCATGCTTCCTCGTCGACATGAAGGAGGAC 17049 Query 111792 TCAATCAATGGCATTTACGGCACTCTCACTGAAT-GTGCCCAAATCTCAAAGTGGGCTGG 111850 || | ||||| || | ||| || | || | |||| ||||| ||| ||| || Sbjct 17048 AGCATTGAGGGCATCTATGACAC-CTTAAAGACTTGTGCTATGATCTCTAAGATGGCGGG 16990 Query 111851 TGGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAGTCTCGTAT-TAGA-GGTACA 111908 ||| || || || || | || || | |||| | | ||| || | | || || Sbjct 16989 TGGAATTGGTCTGAACGTGCACCGCATCCGTGCCACC--GGCTCATACATCGCTGGCACT 16932 Query 111909 AATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTAT 111968 || ||| || |||| |||| |||||||| || || || ||| ||| || || || Sbjct 16931 AACGGTACCTCTAATGGCATTACCCCAATGCTGCGGGTCTTCAACAACACCGCCCGATAC 16872 Query 111969 GTAAACCAAGCTGG------GCGTCGCAAGGGATCTATCGCAGTCTATCTTGAGCCATGG 112022 || |||| | ||| ||||| | || | |||| |||| |||||||||||| Sbjct 16871 GTCGACCAGGGTGGCAACAAGCGTCCC---GGTGCCTTCGCTATCTACCTTGAGCCATGG 16815 Query 112023 CACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGCGCGG 112082 ||||| ||| | | ||||||||||| |||| ||||| ||| | |||||| || Sbjct 16814 CACGCCGATGTATTCGAGTTCCTTGACCTGCGCAAGAACCACGGTAAGGAGGAGATCCGA 16755 Query 112083 TGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAG 112142 ||| ||||| ||| || |||||||| || ||||| ||||||||| | || ||| || Sbjct 16754 GCCCGTGATCTTTTCCTTGCCCTCTGGATCCCCGATCTTTTCATGAAGCGGGTCGAGAAG 16695 Query 112143 AGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGCCGTGGGT 112202 | || | ||| | || | || || || || || || ||| |||| | ||| Sbjct 16694 AACGGTGACTGGACCCTGATGTGCCCTAACGAGTGTCCTGGCCTCGCCGACTGCTACGGT 16635 Query 112203 GAGGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGGGCGACTGC--GACGG 112260 ||||||||||| || |||||| |||||||| | || |||| | | | || ||| Sbjct 16634 GAGGAGTTTGAGGCTCTCTACGAGCAGTACGAGAAGGAGGGTCGTG-GTC-GCAAGACCA 16577 Query 112261 TGCCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCA 112319 || || | || | ||||| | || |||||| || |||| || |||||||| | || Sbjct 16576 TG-AAGGCCCAGAAGCTGTGGTATGCCATTCTCGAGGCTCAGACTGAGACTGGCAACCCC 16518 Query 112320 TATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATC 112379 | ||||| ||||| ||| | |||| ||||| || || ||||| ||||| ||| Sbjct 16517 TTCATGCTGTACAAGGACCACGCCAACCGGAAGAGCAACCAGAAGAACCTGGGTACCATC 16458 Query 112380 AAGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTG 112439 || |||||||| || || || ||| | || | | | | ||||||| || ||| Sbjct 16457 CGAAGCTCCAACCTTTGCACTGAGATCATTGAGTACTCTGCCCCAGATGAGGTCGCCGTG 16398 Query 112440 TGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGAC--ATTTG 112497 || ||| | || || || ||||| ||| ||||| || | ||||| || | Sbjct 16397 TGCAACTTGGCCTCCATTGCTCTGCCCGCATATGTTGA--CTACGACAACAACTGCTACA 16340 Query 112498 ATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAACAGAGTTATTG 112557 | | | | | ||||| ||||| | ||| ||||| |||| | |||| Sbjct 16339 ACTTCCAGCAGTTGCACGAGGTTACCCAGGTCGTCGTCCGCAACCTGAACAAGATCATTG 16280 Query 112558 ATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTG 112617 || || ||||| || || || || || ||| ||||||| || |||| Sbjct 16279 ATGTCAACCACTACCCGGTCAAGGAGGCCTACAACAGCAACATGCGACACCGACCTATTG 16220 Query 112618 GTCTCGGTGTCCAAGGTCTCGCGGATGTATTCATTCTTTGTCGCCACGCA-----TTTGA 112672 || |||| || || ||||| || || | |||| ||| | | ||||| || || Sbjct 16219 GTGTCGGCGTTCAGGGTCTTGCCGACGCATTC-----TTGGCACTACGCATGCCTTTCGA 16165 Query 112673 TTCCGACGAAGCGAAGGAAATCAATGCGCGTATATTTGAGACAATGTATCACGCCGCTCT 112732 ||| || || || | || || || || ||||| || || ||||| || || Sbjct 16164 CTCCCCGGAGGCCCGTGAGCTGAACAAGCAGATCTTCGAGACCATCTACCACGCTGCCCT 16105 Query 112733 ---TGAGGCGAGTTCGGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTC 112789 | | ||| || | || |||| || || || || | || | ||||| Sbjct 16104 CACCGCATCAAGT---GACATTGCCAAGGTGGAGGGCCCCTACAAGACATACGAGGGCAG 16048 Query 112790 TCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCTTCACTA 112849 || | |||||||| | || || || || |||||| | | || || | || Sbjct 16047 CCCCGTCTCACAAGGCATCCTGCAGTTCGACATGTGGAATGTCAAGCCCTCCGACCTCTG 15988 Query 112850 CGACTGGGACGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGAT 112909 |||||||| || |||||||| |||||||||| ||| |||| ||||| || ||| | Sbjct 15987 GGACTGGGATGCGCTCAAGGAGAAGATCAAGGAGACTGGTGTTCGCAACAGCCTGTTGCT 15928 Query 112910 GGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACC 112969 |||||||||||| || || || || | || ||| |||| || ||||| |||||||| || Sbjct 15927 GGCACCAATGCCCACTGCGTCGACGTCGCAGATCCTGGGCAACAATGAGTGCTTTGAGCC 15868 Query 112970 CTACACGACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCAAC-- 113027 ||||| | |||||||| | | || | ||||| || ||||| | | |||||| Sbjct 15867 ATACACCTCCAACATCTACCAGCGACGTGTGCTCGCTGGCGAGTTCCAGGTCGTCAACCC 15808 Query 113028 -AAGCATCTCGTGGATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGATATGAAGGATCT 113086 || ||| |||| || | |||| | || | ||||| ||| |||||| | | Sbjct 15807 TTGGCTCCTCAGGGAT---CTGACAGAGCTCGGCTTGTGGTCTGAGGCCATGAAGAACCG 15751 Query 113087 CATGGTGAAAGCGGGTGGTTCCATTCAAAATATTGTGGATATTCCAGATGAAATTAAGAA 113146 || | | || |||||||||||| || ||| || || | ||| || ||| Sbjct 15750 TATCATCGCCGAGGATGGTTCCATTCAGAACATTCCTAGCATCCCGGCTGATATCAAGGC 15691 Query 113147 GTTGTACCGCACAGTTTGGGAAATCAAGATGAAGGATGTCATTG---ACATGGCCGCAGA 113203 | ||| || || ||||| ||| | |||| ||||| | ||||| || || Sbjct 15690 CCTCTACAAGACCGTCTGGGAGATCTCTCAG-AGGA--CCATTGTGCAGATGGCTGCTGA 15634 Query 113204 TCGTGGTCGCTTCATTGATCAAAGTCAAAGTATGAATCTATTCATG-GAAAGTCCAACGA 113262 |||||| |||||||||||| ||| | | || | |||| | || ||| | | Sbjct 15633 CCGTGGTGCCTTCATTGATCAGTCTCAGTCTCTCAACATCCACATGAGGGAG-CCATCCA 15575 Query 113263 TGTCCAAGCTCTCTTCTATGCACATGTACAGTTGGAAGAAGGGTCTCAAAACGGGGATGT 113322 || |||| || | |||||| | | | |||||| |||||||| || || |||| Sbjct 15574 TGGGCAAGATCACCAGCATGCACTTCGCCGGCTGGAAGCTCGGTCTCAAGACTGGCATGT 15515 Query 113323 ATTACCTCCGATCTAAGGCAAAGGCGCGC-CCAATTCAGTTCA 113364 | |||||||| || ||||| || ||| || || ||||||| Sbjct 15514 ACTACCTCCGCACTCAGGCAGCTGC-CGCACCCATCCAGTTCA 15473 >seq56 Length=117397 Score = 102 bits (112), Expect = 1e-16 Identities = 152/215 (71%), Gaps = 8/215 (4%) Strand=Plus/Minus Query 102110 AGTTCCATGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGATACAAAGTCGCG 102169 ||| || || || | ||||| || || |||||| | |||||| || || ||||| Sbjct 53565 AGTCCCGTGCATCCGCAAGAAGGCCGACTGGGCTCTCAAGTGG----ATCCAGGATCGCG 53510 Query 102170 TT----CCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTG 102225 ||| ||| ||||||| | || || || || ||||| ||||||||| | Sbjct 53509 AGTCCACCTATGCCCAGCGACTGGTTGCCTTCGCTGCCGTCGAGGGCATCTTCTTCAGCG 53450 Query 102226 GTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCT 102285 | | ||| | | |||| |||||||||||||| || |||||||| || || ||||| Sbjct 53449 GCGCATTCGCCTCCATTTTCTGGCTCAAGAAGCGTGGCCTCATGCCTGGCCTGACCTTCT 53390 Query 102286 CCAACGAGCTTATCTCTCGTGACGAGGGACTCCAC 102320 |||||||||| || |||||||| ||||| || ||| Sbjct 53389 CCAACGAGCTCATTTCTCGTGATGAGGGTCTGCAC 53355 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620735385610880