Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20ampelina_20[genbank_20GCA_5F001630405.1_202016-04-25] 904 sequences; 59,495,866 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq48 253 2e-62 seq56 105 8e-18 >seq48 Length=122101 Score = 253 bits (280), Expect = 2e-62 Identities = 1138/1775 (64%), Gaps = 55/1775 (3%) Strand=Plus/Plus Query 105558 TGAACTGAATTGG-GCGCGCCTTTGCCTTAGATCGGAGATAGTACATCCCGGTCTTGAGT 105616 ||||||| || || ||| || ||||| || ||||| |||||||| || |||||||| Sbjct 15473 TGAACTGGATGGGTGCG-GCAGCTGCCTGAGTGCGGAGGTAGTACATGCCAGTCTTGAGA 15531 Query 105617 CCTTGTTTCCACGCGTACATATGCATAGAAGAGAGCTTGGACATCGTTGGACTTTC-CAT 105675 || | ||||| || | ||||| | || |||| ||| | ||| || | ||| Sbjct 15532 CCGAGCTTCCAGCCGGCGAAGTGCATGCTGGTGATCTTGCCCATGGATGG-CTCCCTCAT 15590 Query 105676 GAAAAGATTCATACTTTGACTCTGGTCAATGAAGCGACCACGTTGTGCCGCCATAT---C 105732 | | || | | ||| ||| ||||||||| |||||| | || ||||| | | Sbjct 15591 GTGGATGTTGAGAGACTGAGACTGATCAATGAAGGCACCACGGTCAGCAGCCATCTGCAC 15650 Query 105733 AATGACATCCTTCATCTTGATTTCCCACACTGTGCGGTAGAGATTCTTGATATCATCTGG 105792 |||| |||| | ||| ||||| || || |||||| |||||||||| | || Sbjct 15651 AATGG--TCCT-CTGAGAGATCTCCCAGACGGTCTTGTAGAGGGCCTTGATATCAGCCGG 15707 Query 105793 GATATCTGAGATATTTTGAATTGAACCCCCCGCCTTGACCATGAGATCCTTCATATCCTT 105852 ||| | || || ||||| ||||| || | || || | | |||||| ||| Sbjct 15708 GATGCTAGGAATGTTCTGAATGGAACCATCCTCGGCGATGATACGGTTCTTCATGGCCTC 15767 Query 105853 GGACCAAAGACCAATCTTCTTGAGATCATTGACGAGATGCTTGTTGACAATCACAAACTC 105912 ||||| | || | || | ||||| ||| ||| |||||| | | ||||| Sbjct 15768 AGACCACAAGCCGAGCTCTGTCAGATCCCTGAGGAGCCAAGGGTTGACGACCTGGAACTC 15827 Query 105913 TCCCGCGAGGGTTCTTCTCAGATAGATGTTCGTCGTGTAGGGTTCAAAGCATTCATTATT 105972 || ||||| | || | | |||||||| | ||||| || |||||||| ||||| || Sbjct 15828 GCCAGCGAGCACACGTCGCTGGTAGATGTTGGAGGTGTATGGCTCAAAGCACTCATTGTT 15887 Query 105973 ACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAG 106032 |||| ||| || | || || || || ||||||||||||| ||| || ||||| |||| Sbjct 15888 GCCCAGGATCTGCGACGTCGACGCAGTGGGCATTGGTGCCAGCAACAGGCTGTTGCGAAC 15947 Query 106033 ACCCTTTTCCTTGATGCGTTCCTTGAGAACATCCCAGTCGTAGTTGA-GCTTGGTTTCAC 106091 ||| | |||||||| |||||||| |||||||||| || | | || || || Sbjct 15948 ACCAGTCTCCTTGATCTTCTCCTTGAGCGCATCCCAGTCCCAGAGGTCGGAGGGCTTGAC 16007 Query 106092 CTTCCCACATATCAAATTGAAGCACCCCTTGGGACGTGGGAGAACCCTCAAATGTCTCAT 106151 |||| |||| || || || || | ||||| || ||| ||||| |||||| | Sbjct 16008 ATTCC-ACATGTCGAACTGCAGGATGCCTTGTGAGACGGGGCTGCCCTCGTATGTCTTGT 16066 Query 106152 AGGAACCTTGGGCTTCAGCCAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTT 106211 ||| || | | | || | |||| || |||| ||||| || ||||| | Sbjct 16067 AGGGGCCCTCCACCTTGGCAATGTCACTTGATGCGGTGAGGGCAGCGTGGTAGATGGTCT 16126 Query 106212 CAAAGATACGAGCATTCATCTCCTTGGCTTCATCTGAATCAAA-----TGCGTAGCGGCA 106266 | ||||| | |||| ||| ||| || || || || ||||||| | || Sbjct 16127 CGAAGATCTGCTTGTTCAGCTCACGGGCCTCCGGGGAGTCGAAAGGCATGCGTAGTGCCA 16186 Query 106267 CAAAATAAATACATCCGCGAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATT 106326 || | | || || ||||| ||||| || | ||||||||||| ||||||||| || Sbjct 16187 AGAA-----TGCGTCGGCAAGACCCTGAACGCCGACACCAATAGGTCGGTGTCGCATGTT 16241 Query 106327 AGACTTTCGCGCAGTCTCAACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTT 106386 || || || || || || || ||||||| ||| || || Sbjct 16242 GCTGTTGTAGGCCTCCTTGACCGGGTAGTGGTTGACATCAATGATCTTGTTCAGGTTGCG 16301 Query 106387 GGTAACAATCTTTGTGATTTCATGAAGTTTTTCATAATCAAA--AGTGCGAGTC-TCTTC 106443 | || | || || | || || | | | | | | ||| ||| | || Sbjct 16302 GACGACGACCTGGGTAACCTCGTGCAACTGCTGGAAGTTGTAGCAGTTGTTGTCGTAGTC 16361 Query 106444 ATTGACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATC 106503 | ||||| || || || || || ||||| ||||| || || |||||| | Sbjct 16362 A---ACATATGCGGGCAGAGCAATGGAGGCCAAGTTGCACACGGCGACCTCATCTGGGGC 16418 Query 106504 TGTGTACTCTAAAATTTCTGTACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTG 106563 | |||||| | || || || || | |||||| || || || |||| ||||| || Sbjct 16419 AGAGTACTCAATGATCTCAGTGCAAAGGTTGGAGCTTCGGATGGTACCCAGGTTCTTCTG 16478 Query 106564 GTTACTCTTTTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTG 106623 ||| ||||| |||| |||||||| |||||| |||| | || ||||| ||||| Sbjct 16479 GTTGCTCTTCCGGTTGGCGTGGTCCTTGTACAGCATGAAGGGGTTGCCAGTCTCAGTCTG 16538 Query 106624 TGACTTGAGAATTGCCTTCCACA-CATCGGCGGCTGGTACAATGGCGTTGG---CCCGTC 106679 | || |||||| || | ||||| | || | | || |||| ||| | || | Sbjct 16539 AGCCTCGAGAATGGCATACCACAGCTTCTGGGCCTTC----ATGGTCTTGCGACCACGAC 16594 Query 106680 CCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGAC 106739 ||||| |||||||| |||||| || |||||||||||||| ||||| ||| | Sbjct 16595 CCTCCTTCTCGTACTGCTCGTAGAGAGCCTCAAACTCCTCACCGTAGCAGTCGGCGAGGC 16654 Query 106740 CTGGTGCCTTGTCTGGACAGAAAAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGA 106799 | || || || || || | || | ||| | ||| || ||| ||||||||||||| Sbjct 16655 CAGGACACTCGTTAGGGCACATCAGGGTCCAGTCACCGTTCTTCTCGACCCGCTTCATGA 16714 Query 106800 AAAGGTCTGGAATCCACAGGG-ATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCT 106858 |||| || || ||||| |||| | | ||| ||||| | || ||| || | ||| Sbjct 16715 AAAGATCGGGGATCCAGAGGGCAAGGAAA-AGATCACGGGCTCGGATCTCCTCCTTACCG 16773 Query 106859 TGGTTGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACT 106918 ||||| || | ||||||||||| | | ||| ||||||||||||||||| |||| Sbjct 16774 TGGTTCTTGCGCAGGTCAAGGAACTCGAATACATCGGCGTGCCATGGCTCAAGGTAGATA 16833 Query 106919 GCGATAGATCCCTTTCGACGC------CCAGCTTGATTTACATAGCGCGCTGTGGCGTTA 106972 |||| | || ||||| ||| | || | || || || || ||| ||| Sbjct 16834 GCGAAGGCACC---GGGACGCTTGTTGCCACCCTGGTCGACGTATCGGGCGGTGTTGTTG 16890 Query 106973 AATACGCGAAGCATTGGAATAATACCATCTGATTGACCATTTGT-CCCCCGA-ATACGAG 107030 || || || |||||||| |||| |||| || ||| || || || ||| || ||| Sbjct 16891 AAGACCCGCAGCATTGGGGTAATGCCATTAGAGGTACCGTTAGTGCCAGCGATGTATGAG 16950 Query 107031 ATTTATTGGCTCTCACATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTT 107090 |||| | | || | || || ||||| || || ||| ||| ||||| Sbjct 16951 --CCGGTGGCACGGATGCGGTGCACGTTCAGACCAATTCCACCCGCCATCTTAGAGATCA 17008 Query 107091 GCGCAC-ACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATA 107149 |||| | || |||| || ||||||| || | || ||||||||| || ||| Sbjct 17009 TAGCACAAGTCTTTAAG-GTGTCATAGATGCCCTCAATGCTGTCCTCCTTCATGTCGACG 17067 Query 107150 AGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCG 107209 |||||||| |||| ||| || || || ||||||||||| | || || | || Sbjct 17068 AGGAAGCATGATGACAGCTGGGGCTGAGGAGTGCCAGCATTGAACAATGTGGGGGAGGCA 17127 Query 107210 TGAATGAACATACCT-TGGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTC 107268 || |||| | || | | |||||| || ||| ||||| | ||| || | || || Sbjct 17128 TGTGTGAAGA-ACTTGTTTGACATCAGGTTGTAGGTCTCAATGACCCTCTCGACATCGTC 17186 Query 107269 CCCGTGGATGCCGATGGCCACACGCATAAACATGT 107303 || ||| |||| || |||||||| | ||||| Sbjct 17187 TCCCCAGATACCGACAGCGACACGCATGATCATGT 17221 >seq56 Length=117397 Score = 105 bits (116), Expect = 8e-18 Identities = 293/448 (65%), Gaps = 10/448 (2%) Strand=Plus/Plus Query 116986 TAGTCCCCAACTCGCTTCTCAAAGAAGTTGGTCTTCCCATCAAGGCTAATGTTTTCCATA 117045 ||||| || || ||||||||||||||||||||||| ||| | || ||||| ||||| Sbjct 53056 TAGTCACCGACACGCTTCTCAAAGAAGTTGGTCTTGCCACCGAGAGAGATGTTCTCCATG 53115 Query 117046 AAGTCAAATGGATTCTTCGCGTTCCAAA-----TGGGTGGCACCCCAACTTGTTTGAGGA 117100 ||||| || || ||| || || ||| | | || |||| | |||| Sbjct 53116 AAGTCGAAGGGGTTCGACGACTTGTAAACCTTCTCGTTG----CCCAGAGCGACC-AGGA 53170 Query 117101 GACGATCCGACACATACTCAATGTACTCGGACATCTTCTCAGAGTTCATACCGATGAGAT 117160 |||| || | ||| |||| ||||||| ||| | |||||||| |||| ||| Sbjct 53171 GACGGTCGGCAACAAACTCGATGTACTGCTTCATGAGGTTGGAGTTCATGCCGAGGAGGG 53230 Query 117161 TACATGGGAGTGCGTCCAAGATGAACCCTTTCTCAATCTCAACCGCCTCTTTCACGATGG 117220 ||||| || || || | |||| | ||||| || | || ||||| | | |||| Sbjct 53231 CGCATGGCAGAGCCTCAGTCAAGAACTCCTTCTCGATGGCGACGGCCTCGGTGATGATGT 53290 Query 117221 CGTGGATAGTTTCGGTAGTGGGTCTATTACGCAAAGTCTTGAAGAGCTCCACGGCAAACT 117280 | | || | | | | || | || | || ||| || ||| || | Sbjct 53291 CCTCGACACGCTGCTTGCTTGGACGGTTCCTCAGGTGAGAGAACAGGAGACAGGCGAAGT 53350 Query 117281 CCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCATGA 117340 | ||| ||||||||||| || ||||| || || || |||||| ||||| ||||||| Sbjct 53351 CGGTGTGCAGACCCTCATCACGAGAAATGAGCTCGTTGGAGAAGGTCAGGCCAGGCATGA 53410 Query 117341 GACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCA 117400 | || |||||||| | ||| |||| | | ||||| ||| ||||||||| ||||| | Sbjct 53411 GGCCACGCTTCTTGAGCCAGAAAATGGAGGCGAATGCGCCGCTGAAGAAGATGCCCTCGA 53470 Query 117401 CACACGCAAACGCAAAAAGGCGCTCGGC 117428 | || || |||| || |||| ||| Sbjct 53471 CGGCAGCGAAGGCAACCAGTCGCTGGGC 53498 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589974133216960