Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Diaporthe_20ampelina_20[genbank_20GCA_5F001630405.1_202016-04-25]
904 sequences; 59,495,866 total letters
Query= NC_018504.1
Length=123876
Score E
Sequences producing significant alignments: (Bits) Value
seq427 98.7 8e-16
seq157 98.7 8e-16
>seq427
Length=29395
Score = 98.7 bits (108), Expect = 8e-16
Identities = 146/207 (71%), Gaps = 0/207 (0%)
Strand=Plus/Minus
Query 101266 ATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTG 101325
||| |||||||| || ||||| || ||||| |||| || || | | | || || | |||
Sbjct 25217 ATGGAGGGTAGACTCCTTTTGAATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCGAGTTG 25158
Query 101326 CTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTT 101385
||| || ||||| || | |||||| || || || || ||||| || || ||||| || ||
Sbjct 25157 CTTGCCGGCAAAGATAAGACGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCTTGGATCTT 25098
Query 101386 TTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGT 101445
|| ||| | || | || || || | || || || || |||| || ||||| ||
Sbjct 25097 GGACTTGACATTGTCGATGGTATCGGAGGACTCGACCTCGAGCGTGATGGTCTTGCCTGT 25038
Query 101446 TAAAGTTTTTACAAATATCTGCATGGT 101472
| || || || || |||||||||||
Sbjct 25037 GAGGGTCTTCACGAAGATCTGCATGGT 25011
>seq157
Length=302622
Score = 98.7 bits (108), Expect = 8e-16
Identities = 144/204 (71%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326
|| ||||| || || || || || ||||| |||| || || | | | || || | |||
Sbjct 142271 TGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTACGGCCGTCCTCGAGCTGC 142330
Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386
|| || || || |||| |||||| || || || ||||||||||| || || || || ||
Sbjct 142331 TTGCCGGCGAAGATCAGACGCTGCTGGTCTGGGGGAATGCCTTCCTTGTCCTGGATCTTG 142390
Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446
|| ||| | || | ||||| || | ||||| ||||| |||| || ||||| ||
Sbjct 142391 GACTTGACATTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATAGTCTTGCCCGTG 142450
Query 101447 AAAGTTTTTACAAATATCTGCATG 101470
| || || || || |||||||||
Sbjct 142451 AGGGTCTTCACGAAGATCTGCATG 142474
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 396274034002728
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |