Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20ampelina_20[genbank_20GCA_5F001630405.1_202016-04-25] 904 sequences; 59,495,866 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq48 369 7e-97 seq56 158 2e-33 >seq48 Length=122101 Score = 369 bits (408), Expect = 7e-97 Identities = 1217/1870 (65%), Gaps = 64/1870 (3%) Strand=Plus/Plus Query 212553 ACCGTAAACTGTACTGGATCAGCAGCAGCCTTGGTGCGTAGATAGTACATGCCGGTCTTT 212612 || || ||||| | || | ||||| |||| ||||| || ||||||||||| ||||| Sbjct 15469 ACAGTGAACTGGATGGGTGCGGCAGCTGCCTGAGTGCGGAGGTAGTACATGCCAGTCTTG 15528 Query 212613 AGGCC---CTTGCCCCAGCCGTGCATGTGCATTGCTG-TGAGTTTCTTCAGCTTAATATT 212668 || || ||| ||||||| | |||||| |||| ||| || || | || Sbjct 15529 AGACCGAGCTT---CCAGCCGGCGAAGTGCAT-GCTGGTGATCTTGCCCA--TGGATG-- 15580 Query 212669 CTGGTCATCCTCGTGGCCCAGATGTAGGTTCAGGGACTGACTCTGGTCTATGAATGGGGC 212728 | || |||| || || | ||| || |||||| ||| || ||||| | | Sbjct 15581 --GCTC--CCTCATG-------TGGATGTTGAGAGACTGAGACTGATCAATGAAGGCACC 15629 Query 212729 CCTGTCAGCGGCCATGTCTATGATATCTCTCTGGGAGAGCTCCCACACGGTCTTGAAGAT 212788 | |||||| ||||| | | || ||||| |||| |||||| ||||||||| ||| Sbjct 15630 ACGGTCAGCAGCCATCTGCACAATGGTCCTCTGAGAGATCTCCCAGACGGTCTTGTAGAG 15689 Query 212789 TTCTTTGAGGTCCTCTGGGAAGCCGGGGATGTTCTGCACAGACCC--CCTGTGT-ATGGT 212845 | |||| || | |||| || || |||||||| | || || ||| | ||| | Sbjct 15690 GGCCTTGATATCAGCCGGGATGCTAGGAATGTTCTGAATGGAACCATCCTCGGCGATGAT 15749 Query 212846 CAGCTGCAGGCGCATGTCCTCGTTCCAGAGGCCCCTGGTCTC-CAGGCACTTGACCAGGT 212904 | | | |||| |||| ||| | ||| | ||| ||| | ||| || Sbjct 15750 ACGGTTCTT---CATGGCCTCAGACCACAAGCCGA-GCTCTGTCAGATCCCTGAGGAGCC 15805 Query 212905 GAGGGTTGACTATCTGGAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGT 212964 ||||||||| | |||||| || || | |||||| | | |||||| | ||| || |||| Sbjct 15806 AAGGGTTGACGACCTGGAACTCGCCAGCGAGCACACGTCGCTGGTAGATGTTGGAGGTGT 15865 Query 212965 AGGGCTCGATGCTCTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGGGAG 213024 | ||||| | || ||| ||||| ||||| ||||| | || || |||||||| || | Sbjct 15866 ATGGCTCAAAGCACTCATTGTTGCCCAGGATCTGCGACGTCGACGCAGTGGGCATTGGTG 15925 Query 213025 CCACCAGGAGACTGTTCCTCACTCCGTGCTCGCCGATGAGGCGCCGAAGCTCTGCCCAGT 213084 ||| || || ||||| | || || ||| ||| | ||| | |||||| Sbjct 15926 CCAGCAACAGGCTGTTGCGAACACCAGTCTCCTTGATCTTCTCCTTGAGCGCATCCCAGT 15985 Query 213085 CCCATCTGCCAGACAGGTCCTCGTCCTTCACGTTCCACATGTCAAACTGCAAGATGCCTT 213144 |||| ||||| | ||| || ||||||||||| ||||||| |||||||| Sbjct 15986 CCCAG---------AGGTCGGAGGGCTTGACATTCCACATGTCGAACTGCAGGATGCCTT 16036 Query 213145 TGCTCACGGGGCTGCCCTGGTAAGAGGAGTAGGGGCCATGCTCCTTGGCCAGCTCGCAGG 213204 ||||||||||||| ||| | ||||||||| | | ||||||| | || | | Sbjct 16037 GTGAGACGGGGCTGCCCTCGTATGTCTTGTAGGGGCCCTCCACCTTGGCAATGTCACTTG 16096 Query 213205 ACGCCTGCAGGGCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTTGAGCTTCTTGGCCT 213264 | || |||||||||| ||||||||| || || |||| | |||| |||| ||||| Sbjct 16097 ATGCGGTGAGGGCAGCGTGGTAGATGGTCTCGAAGATCTGCTTGTTCAGCTCACGGGCCT 16156 Query 213265 CTGGGGACGTGAAGGGCAT-CATCATGCGTTGGAACACATCAGCCAGCCCCTGGACCCCG 213323 | ||||| ||| ||||| | | ||| ||| | || || || ||||| || ||| Sbjct 16157 CCGGGGAGTCGAAAGGCATGCGTAGTGC-CAAGAATGCGTCGGCAAGACCCTGAACGCCG 16215 Query 213324 ATGCCGATGGGTCTGTGTCTCAGGTTAGACTTGGAGCACTCCTCCAAGGGGTAAAAGTTG 213383 | || || |||| ||||| || ||| ||| || ||||| | ||||| |||| Sbjct 16216 ACACCAATAGGTCGGTGTCGCATGTTGCTGTTGTAGGCCTCCTTGACCGGGTAGTGGTTG 16275 Query 213384 CAGTCGATGATCTTGTTGAGGTTGCGGGTGGCCACTTTGGTGACATGGGCCAGGTACTCG 213443 || ||||||||||| ||||||||| | | || | ||| || | | || | || | Sbjct 16276 ACATCAATGATCTTGTTCAGGTTGCGGACGACGACCTGGGTAACCTCGTGCAACTGCTGG 16335 Query 213444 TGATTGAACACGTAGCCCCCGTCCTGCACAAACTCAGGCAGGGCGATGCTGGCCAGGTTG 213503 ||| | || | ||| | ||| | | ||||| || ||| ||||| |||| Sbjct 16336 AAGTTGTAGCAGTTGTTGTCGTAGTCAACATATGCGGGCAGAGCAATGGAGGCCAAGTTG 16395 Query 213504 CAAACGGCCACCTCCTGAGAGTCTGTGTACTCCATGATCTCGGTGCACAGGTTGCTGCAT 213563 || ||||| ||||| | | | | | |||||| |||||||| ||||| |||||| || | Sbjct 16396 CACACGGCGACCTCATCTGGGGCAGAGTACTCAATGATCTCAGTGCAAAGGTTGGAGCTT 16455 Query 213564 CGGATGGTGCCCAGGTTCTGGTGGTTTGACTTTGCGTTGGCAGAATCCTTGTAGAGCATG 213623 |||||||| |||||||||| ||||| ||| |||||| |||||||| |||||| Sbjct 16456 CGGATGGTACCCAGGTTCTTCTGGTTGCTCTTCCGGTTGGCGTGGTCCTTGTACAGCATG 16515 Query 213624 TAGGGGGACCCGGTCTCTAGCTGGGACACCAGTATCTGGC--TCCAGAGGTACCTGGCCT 213681 ||||| || ||||| ||| | | | || | |||| ||| || | | ||||| Sbjct 16516 AAGGGGTTGCCAGTCTCAGTCTGAGCCTCGAGAA--TGGCATACCACAGCTTCTGGGCCT 16573 Query 213682 TGACCACCCGCCTGACAGCTCCGGGCGTAGCCTCGTACTGTTCGTAGAGCTCGTTGAATT 213741 | || | || | | | | ||||||||| |||||||| | | || | Sbjct 16574 T---CATGGTCTTGCGACCACGACCCTCCTTCTCGTACTGCTCGTAGAGAGCCTCAAACT 16630 Query 213742 CGTGGCCCCAGACCCTGTCCAGTCCCGGACAGGATGCGGGACACATGAGGCTCCAGTCCC 213801 | | || || | | || || ||||| || ||||| ||| ||||||| | Sbjct 16631 CCTCACCGTAGCAGTCGGCGAGGCCAGGACACTCGTTAGGGCACATCAGGGTCCAGTCAC 16690 Query 213802 CG-TCATCTCTGACTCTCTGCATGAACAGGTCCGGGACCCACAGCGCGGTGAACAGGTCC 213860 || || |||| ||| | || |||||| || || |||| ||| || || ||| || || Sbjct 16691 CGTTCTTCTC-GACCCGCTTCATGAAAAGATCGGGGATCCAGAGGGCAAGGAAAAGATCA 16749 Query 213861 CTGGTCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCAGATCTAGAAAGTCAAAGATGTCC 213920 | || | |||| ||| || ||| |||||||| || || || || || | || Sbjct 16750 CGGGCTCGGATCTCCTCCTTACCGTGGTTCTTGCGCAGGTCAAGGAACTCGAATACATCG 16809 Query 213921 GCGTGCCACGGCTCCATGTAGATGGCAAAGGCGCCCG---GCCTCTTGCCGCCCTGGTCC 213977 |||||||| ||||| | |||||| || ||||| || | || | ||||| |||||||| Sbjct 16810 GCGTGCCATGGCTCAAGGTAGATAGCGAAGGCACCGGGACGCTTGTTGCCACCCTGGTCG 16869 Query 213978 ACCAGCCTGGCCACCATGTTGAAGATGCGCAGGA--CGGGTACCAGCCCGTTGGACTGTC 214035 || | ||| ||||||||| ||||| | ||||| | || || || | Sbjct 16870 ACGTATCGGGCGGTGTTGTTGAAGACCCGCAGCATTGGGGTA--ATGCCATTAGAGGTAC 16927 Query 214036 CGTTGGTTCCCGCTATATACGAGCCGGAGGCCCTCAGGTTGCTCATGGAGAGCCCTATGC 214095 |||| || || || || || ||||||| ||| | | | | || | || || || | Sbjct 16928 CGTTAGTGCCAGCGATGTATGAGCCGGTGGCACGGATGCGGTGCACGTTCAGACCAATTC 16987 Query 214096 CACCGGCGTACTTGGAGATCATGGCGCAGCGCCTCACAGTCTCCATGATGCCGGCCATGC 214155 |||| || ||| |||||||| || || | | | || || |||||| | |||| Sbjct 16988 CACCCGCCATCTTAGAGATCATAGCACAAGTCTTTAAGGTGTCATAGATGCCCTCAATGC 17047 Query 214156 TGTCATCTGTGAGGTTCAGCAAGAAGCAGCTCGAGAGCTGGGGCCTGGACGAGCCAGAGT 214215 |||| || | | || | | |||||| || ||||||||| | | ||||| | Sbjct 17048 TGTCCTCCTTCATGTCGACGAGGAAGCATGATGACAGCTGGGGCTGAGGAGTGCCAGCAT 17107 Query 214216 TGAAAAGCGTGGGGCTGGCATGGATCATAAACTTGTTAGAGAGGAGCCTGTAGGTCTCCA 214275 |||| | |||||| |||||| | | |||||||| || | || |||||||||| | Sbjct 17108 TGAACAATGTGGGGGAGGCATGTGTGAAGAACTTGTTTGACATCAGGTTGTAGGTCTCAA 17167 Query 214276 GGACTGAGGGGATGTCGTGCTTGTGGATCTGTAGAGCGCACCTCATCAGCATGTGCTGGG 214335 ||| || |||| ||| | |||| | ||| | ||||||||| | Sbjct 17168 TGACCCTCTCGACATCGTCTCCCCAGATACCGACAGCGACACGCATGATCATGTGCTGTG 17227 Query 214336 GCCTCTCTATGGGT---CCTTTGGGGCCCTTGAGCAGGTAGGAGCGCTCCAGAGTCTTGA 214392 ||| ||| | | || | | | |||||| ||||| || ||||| || ||||||| Sbjct 17228 GCCGCTCGACAACTTTACCATCGAG---CTTGAGGAGGTACGAACGCTCGAGTGTCTTGA 17284 Query 214393 ACCCAAAGTA 214402 | || ||||| Sbjct 17285 AGCCGAAGTA 17294 >seq56 Length=117397 Score = 158 bits (174), Expect = 2e-33 Identities = 300/439 (68%), Gaps = 11/439 (3%) Strand=Plus/Plus Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898 ||||||||| || || | |||||||||||||| ||||| || | | ||||||||||| Sbjct 53052 CTGGTAGTCACCGACACGCTTCTCAAAGAAGTTGGTCTTGCCACCGAGAGAGATGTTCTC 53111 Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTATACACCCGTGTC-AGGCCCATCTGTTCCAGCA 47957 ||||||| ||||||||| | | || || | || | || ||||| |||| | Sbjct 53112 CATGAAGTCGAAGGGGTTCGACGACTTGTA-AACCTTCTCGTTGCCCAGAGCGACCAGGA 53170 Query 47958 GGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGGG 48017 | | || || || |||||||||| | ||||||| || ||||||||| | ||||| Sbjct 53171 GACGGTCGGCAACAAACTCGATGTACTGCTTCATGAGGTTGGAGTTCATGCCGAGGAGGG 53230 Query 48018 ACACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATCT 48077 |||| ||||| || | ||||||||||| || ||||| || | || | Sbjct 53231 CGCATGGCAGAGCCTCAGTCAAGAACTCCTTCTCGATGGCGACGGCCTCGGTGATGATGT 53290 Query 48078 GCTTAACGCGGGACTCTGAGGGTTTGTTGCGCAGGTGCTTGGCATAGAGCATG---CAGG 48134 || || || || || ||| | |||||| | ||| || | |||| Sbjct 53291 CCTCGACACGCTGCTTGCTTGGACGGTTCCTCAGGTG------AGAGAACAGGAGACAGG 53344 Query 48135 CAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAG 48194 | ||||| |||||| || || || || |||||| ||||||||||| || |||| Sbjct 53345 CGAAGTCGGTGTGCAGACCCTCATCACGAGAAATGAGCTCGTTGGAGAAGGTCAGGCCAG 53404 Query 48195 GCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGC 48254 |||||| || | || |||||||||||||| | ||||| | ||| ||||||||||| Sbjct 53405 GCATGAGGCCACGCTTCTTGAGCCAGAAAATGGAGGCGAATGCGCCGCTGAAGAAGATGC 53464 Query 48255 CCTCCACTGCCGCGAACGC 48273 |||| || || ||||| || Sbjct 53465 CCTCGACGGCAGCGAAGGC 53483 Score = 114 bits (126), Expect = 2e-20 Identities = 189/269 (70%), Gaps = 8/269 (3%) Strand=Plus/Plus Query 48411 TGAGCAGCTTTGCGTACATCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGA 48470 |||||||| | |||| |||||||||| | ||||| || ||||||||| ||||||| Sbjct 53682 TGAGCAGC---GAGTACGTCTCAGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGA 53738 Query 48471 AGGCCCTGGCCTCAAACACCTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGA 48530 || | ||||| | ||| || || | ||| | ||||| ||| ||||| |||| Sbjct 53739 AGCAGCGCGCCTCTGGGATCTGAACCTCGCCGCTGAAGCGCTCCACCAGGTTCTCGTTGA 53798 Query 48531 CTATCCCATCTGAAGCAGCAAAGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGT 48590 | || |||||||||||||| |||||||| |||| || | ||| | ||||||| || Sbjct 53799 CGATTCCATCTGAAGCAGCGAAGAAGGCGAGGATGTGGGAGACGAAGTATCGCTCGTCGT 53858 Query 48591 GGGTGAGAGCAT---TCCAGCCCTGTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCC 48647 ||| || | ||||| | || | ||| ||| || || | || || |||||| Sbjct 53859 CGGTCAGGCGGTTGCTCCAGTCGTGCAGGTCCTTGGAGAGATCGATCTCCTCGGCAGTCC 53918 Query 48648 AGAAGGACGC-GAGTGCTTTTTTGTACAT 48675 ||||||| || |||| || |||||||| Sbjct 53919 AGAAGGAAGCTTCGTGC-TTCTTGTACAT 53946 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931522273679360