Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20ampelina_20[genbank_20GCA_5F001630405.1_202016-04-25] 904 sequences; 59,495,866 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq48 271 1e-67 seq56 158 2e-33 >seq48 Length=122101 Score = 271 bits (300), Expect = 1e-67 Identities = 1020/1582 (64%), Gaps = 62/1582 (4%) Strand=Plus/Plus Query 221116 GTTCACCACTTGGAAATCTCCCGAGAGCACCCTCCTCTGGTACAGGTTAGAAGTGAACGG 221175 ||| || || ||||| || || | |||||| | | |||||| | ||| || ||| | || Sbjct 15810 GTTGACGACCTGGAACTCGCCAGCGAGCACACGTCGCTGGTAGATGTTGGAGGTGTATGG 15869 Query 221176 TTCGATGCTCTCGTTGTTGCCCAGGATCTGAGCCGTGCTGGCGGTGGGCATGGGTGCCAC 221235 || | || ||| ||||||||||||||||| | ||| || |||||||| ||||||| Sbjct 15870 CTCAAAGCACTCATTGTTGCCCAGGATCTGCGACGTCGACGCAGTGGGCATTGGTGCCAG 15929 Query 221236 CAGCAGACTGTTGCGCAGTCCGAATCTA-TTGATGGACTTTCTCAGCGTGTTCCAGTCAC 221294 || ||| |||||||| | || | ||| ||||| || | |||| | |||||| | Sbjct 15930 CAACAGGCTGTTGCGAACACC-AGTCTCCTTGATCTTCTCCTTGAGCGCATCCCAGTCCC 15988 Query 221295 AGTGTCCTCCCAGGTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTAG 221354 || ||||| | | Sbjct 15989 AG---------AGGTCGGAGGGCTTGACATTCCACATGTCGAACTGCAGGATGCCTTGTG 16039 Query 221355 ACACCGGACTCCCATCGTACGACTCGTAGGGACCGTACAGTTCGGCCTGGGCGCAAGACT 221414 | || || || || ||||| | || |||||| || | || | ||| | | | || | Sbjct 16040 AGACGGGGCTGCCCTCGTATGTCTTGTAGGGGCCCTCCACCTTGGCAATGTCACTTGA-T 16098 Query 221415 GCG-TCAGGGCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTGG-CCTC 221472 ||| | ||||||||||||||||||||||| |||||| |||||| || ||| || |||| Sbjct 16099 GCGGTGAGGGCAGCGTGGTAGATGGTCTCGAAGATCTGCTTGTTCAG-CTCACGGGCCTC 16157 Query 221473 GGGAGAAGTGAAGGGCATACGCAGCATCTGAAAGACGTCGGCCAGTCCCTGTACTCCGAT 221532 || || ||| ||||| || || | || ||||||| || ||||| || |||| Sbjct 16158 CGGGGAGTCGAAAGGCATGCGTAGTGCCAAGAATGCGTCGGCAAGACCCTGAACGCCGAC 16217 Query 221533 ACCGATGGGCCTGTGTCTCCTGTTG--GAAGCGGCCGCTTCTGGCACGGGATAAAAGTTG 221590 ||| || || | ||||| | ||||| | | | | || || | |||| || |||| Sbjct 16218 ACCAATAGGTCGGTGTCGCATGTTGCTGTTGTAGGC-CTCCTTGACCGGG-TAGTGGTTG 16275 Query 221591 ACGTCGATCAGATTGTTGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTCTGG 221650 || || || | ||||| ||||| | || ||| | |||||| || || |||| Sbjct 16276 ACATCAATGATCTTGTTCAGGTTGCGGACGACGACCTGGGTAACCTCGTGCAACTGCTGG 16335 Query 221651 TGATTGAACACCAACTCGCCGCCGTCGTGGAGGGGTTCCACAAAAGCGTTTAGGGCAACG 221710 ||| | || | | ||||| | || ||| | ||| || |||| | Sbjct 16336 AAGTTGTAG--CAGTT----GTTGTCGTAG------TCAACATATGCGGGCAGAGCAATG 16383 Query 221711 CTGGCCAGGTTACACACGGCCACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTACAG 221770 ||||| ||| |||||||| ||||| || | | |||| |||||||| || || Sbjct 16384 GAGGCCAAGTTGCACACGGCGACCTCATCTGGGGCAGAGTACTCAATGATCTCAGTGCAA 16443 Query 221771 AGGTTGCTGCACTTGATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCGTCC 221830 |||||| || |||||| ||||||| || || || ||| || ||||| |||| Sbjct 16444 AGGTTGGAGCTTCGGATGGTACCCAGGTTCTTCTGGTTGCTCTTCCGGTTGGCGTGGTCC 16503 Query 221831 TTGTAGAGCATAAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCCAGAGT 221890 ||||| ||||| ||||| ||||||||| ||||||| | ||||| | ||| || Sbjct 16504 TTGTACAGCATGAAGGGGTTGCCAGTCTCAGTCTGAGCCTCGAGAATGGCATACCACAGC 16563 Query 221891 TCTCTGGCGCT-CACCGTCCTCTTGACTGC-ACCCTCGGTCTTTTCATAC--CCGGTATA 221946 | ||||| || || ||| | ||| | |||||| ||| || ||| | ||| | Sbjct 16564 T-TCTGGGCCTTCATGGTCTTGC-GACCACGACCCTC---CTTCTCGTACTGCTCGTAGA 16618 Query 221947 GAGCATGTCAAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGGACACAT 222006 |||| | |||||| |||||||| ||| | ||||| |||||| | || ||||| Sbjct 16619 GAGCCT--CAAACTCCTCACCGTAGCAGTCGGCGAGGCCAGGACACTCGTTAGGGCACAT 16676 Query 222007 CAGACTCCAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACAGCGC 222066 ||| |||||| ||| | | ||||| || |||||| || || |||||||| || || Sbjct 16677 CAGGGTCCAGTCACCGTTCTTCTCGACCCGCTTCATGAAAAGATCGGGGATCCAGAGGGC 16736 Query 222067 CTGAAAGAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAAAA 222126 | || ||||| | || || ||||||| |||| ||| || | ||| || | || Sbjct 16737 AAGGAAAAGATCACGGGCTCGGATCTCCTCCTTACCGTGGTTCTTGCGCAGGTCAAGGAA 16796 Query 222127 CTCAAAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCTTGTT 222186 ||| || | || |||||||| ||||| || |||| || | || ||||| |||||||| Sbjct 16797 CTCGAATACATCGGCGTGCCATGGCTCAAGGTAGATAGCGAAGGCACCGGGACGCTTGTT 16856 Query 222187 GCCACCCTGATCCAC-CATCCTCTCCAGAG-CGTTGAAGATGCGAAGGGTCGGTACCAGT 222244 ||||||||| || || ||| | | | |||||||| || || | || | Sbjct 16857 GCCACCCTGGTCGACGTATC--GGGCGGTGTTGTTGAAGACCCGCAGCATTGGGGTAATG 16914 Query 222245 CCGTTGGATCGACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCCTCAGGTTACTG-GC 222303 || || || |||||| ||||| ||||| | ||| ||| | || | | | || Sbjct 16915 CCATTAGAGGTACCGTTAGTGCCAGCGATGTATGAGCCGGTGGCAC---GGATGCGGTGC 16971 Query 222304 A--GACATGCCGATACCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTGTCC 222361 | || || || ||||| || || |||||||| || || |||| | ||||| Sbjct 16972 ACGTTCAGACCAATTCCACCCGCCATCTTAGAGATCATAGCACAAGTCTTTAAGGTGTCA 17031 Query 222362 ATGATGCCCTCCATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATCTGAGAT 222421 ||||||||| || ||||||||| | || | || || || || |||| ||| | Sbjct 17032 TAGATGCCCTCAATGCTGTCCTCCTTCATGTCGACGAGGAAGCATGATGACAGCTGGGGC 17091 Query 222422 TTGGTGGAACAGGCGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGCCCCTAGACATC 222481 | | | | || || |||| ||||| ||| ||||| ||| | | |||||| Sbjct 17092 TGAGGAGTGCCAGCATTGAACAATGTGGGGGAGGCATGTGTGAAGAACTTGTTTGACATC 17151 Query 222482 AGATCGTACGTCTCTACGACTCTGGCGATGTTGTC-CCCGTGAATCTGCATGGCGCATCT 222540 || | ||| ||||| | ||| || ||| | ||| ||| || | | | ||| | Sbjct 17152 AGGTTGTAGGTCTCAATGACCCTCTCGACATCGTCTCCCCAGATACCG-ACAGCGACACG 17210 Query 222541 CATGTACATGTACTGGGGCCTCTCCACAGGAC----CCTTGGAGCTGGAGAGCAGGTACG 222596 |||| ||||| ||| |||| ||| ||| || || | ||||| ||| ||||||| Sbjct 17211 CATGATCATGTGCTGTGGCCGCTCGACA--ACTTTACCATCGAGCT--TGAGGAGGTACG 17266 Query 222597 ATTTTTCCAGAGTCTTGAACCCAAAGTAGTTGAGGTCAAAGTCTCTGCCGTGAACCACGG 222656 | || || |||||||| || ||||| | | | ||||| | | ||| || | || Sbjct 17267 AACGCTCGAGTGTCTTGAAGCCGAAGTATTGGTAACCGAAGTCACGGTCGTAGACAATGG 17326 Query 222657 CGGCGTCCAGCTCCGACTTGTG 222678 ||| ||| | |||| |||||| Sbjct 17327 CGGAGTCGAACTCCTCCTTGTG 17348 >seq56 Length=117397 Score = 158 bits (174), Expect = 2e-33 Identities = 303/450 (67%), Gaps = 13/450 (3%) Strand=Plus/Minus Query 25877 AGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCA 25936 |||| ||||| ||||| ||||| || ||||||||||| |||||||| | || || ||| Sbjct 53494 AGCGACTGGTTGCCTTCGCTGCCGTCGAGGGCATCTTCTTCAGCGGCGCATTCGCCTCCA 53435 Query 25937 TCTTCTGGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCA 25996 | |||||||||||| || || |||||| || ||| ||| |||||||||||||| Sbjct 53434 TTTTCTGGCTCAAGAAGCGTGGCCTCATGCCTGGCCTGACCTTCTCCAACGAGCTCATTT 53375 Query 25997 GCAGGGACGAGGGTCTCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTTGCTCC 26056 | || |||||||| |||| || || ||||| || || | | | ||| || Sbjct 53374 CTCGTGATGAGGGTCTGCACACCGACTTCGCCTGTCTCCTGTTCTC---TCACCTG---- 53322 Query 26057 ACAAACCTTCTCAAG--AG-ACCGTCTACAG--TATCATCAAAGAGGCTGTGGAGATCGA 26111 | |||| || |||| || | ||| | || ||||||| ||||| || | ||||| Sbjct 53321 AGGAACCGTC-CAAGCAAGCAGCGTGTCGAGGACATCATCACCGAGGCCGTCGCCATCGA 53263 Query 26112 GAAGGAGTTTCNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGGCATGAACAACAGACTCAT 26171 ||||||||| | ||||||||| || ||||| Sbjct 53262 GAAGGAGTTCTTGACTGAGGCTCTGCCATGCGCCCTCCTCGGCATGAACTCCAACCTCAT 53203 Query 26172 GAGCCAATACATTGAGTATGTGGCCGACCATCTGCTGTGCCAGCTGGGACTCGCCAGACT 26231 || || ||||| |||| ||| ||||||| ||| ||| | ||||| || | | Sbjct 53202 GAAGCAGTACATCGAGTTTGTTGCCGACCGTCTCCTGGTCGCTCTGGGCAACGAGAAGGT 53143 Query 26232 CTACAGTACGCCTAACCCGTTCGACTTTATGGAAAACATATCGTTGGAAGGGAAGACCAA 26291 |||| || | ||||| |||||||| ||||| ||||| || | | || |||||||| Sbjct 53142 TTACAAGTCGTCGAACCCCTTCGACTTCATGGAGAACATCTCTCTCGGTGGCAAGACCAA 53083 Query 26292 CTTCTTTGAAAAGAGGGTCGGCGACTATCA 26321 ||||||||| ||| | ||||| ||||| || Sbjct 53082 CTTCTTTGAGAAGCGTGTCGGTGACTACCA 53053 Score = 89.7 bits (98), Expect = 1e-12 Identities = 177/259 (68%), Gaps = 5/259 (2%) Strand=Plus/Minus Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAAC-TCAAACTGGACCGCCGAAGAGATTGATCT 25535 || ||| ||||||||||||| || | || | || |||||| ||||| ||||| ||||| Sbjct 53955 ATCTGGCAGATGTACAAGAA-GCACGAAGCTTCCTTCTGGACTGCCGAGGAGATCGATCT 53897 Query 25536 GGCCAAGGACATGGACGGCTGG---TACGCTCTATCCAAAGACGAGCAGCATTTTCTCAA 25592 |||||||| || ||| |||| || || || | ||||||| | || || Sbjct 53896 CTCCAAGGACCTGCACGACTGGAGCAACCGCCTGACCGACGACGAGCGATACTTCGTCTC 53837 Query 25593 GTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAG 25652 || | | || ||||| || || || ||||| || || |||||||| ||| ||| | Sbjct 53836 CCACATCCTCGCCTTCTTCGCTGCTTCAGATGGAATCGTCAACGAGAACCTGGTGGAGCG 53777 Query 25653 ATTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGCCAT 25712 |||| | | || || ||| | ||||| || |||||||| |||||||| || Sbjct 53776 CTTCAGCGGCGAGGTTCAGATCCCAGAGGCGCGCTGCTTCTACGGCTTCCAGATCATGAT 53717 Query 25713 CGAAAATGTGCACTCTGAG 25731 || || | ||||||||| Sbjct 53716 GGAGAACATCCACTCTGAG 53698 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928834304053760