Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20ampelina_20[genbank_20GCA_5F001630405.1_202016-04-25] 904 sequences; 59,495,866 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq48 266 4e-66 seq56 105 8e-18 >seq48 Length=122101 Score = 266 bits (294), Expect = 4e-66 Identities = 1145/1782 (64%), Gaps = 55/1782 (3%) Strand=Plus/Minus Query 75212 CCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTC 75271 |||||| ||||| ||||||| ||||| |||| ||| || || || | || ||| Sbjct 17228 CCACAGCACATGATCATGCGTGTCGCTGTCGGTATCTGGGGAGACGATGTCGAGAGGGTC 17169 Query 75272 TTGGAGACATACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAACCCTCTT 75330 | ||||| ||| || |||||| | | || | |||| || || | || || | || Sbjct 17168 ATTGAGACCTACAACCTGATGTCAAACAAGT-TCTTCACACATGCCTCCCCCACATTGTT 17110 Query 75331 CAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGA 75390 ||||||||| || || || ||| |||| |||||||| ||| || |||||||| Sbjct 17109 CAATGCTGGCACTCCTCAGCCCCAGCTGTCATCATGCTTCCTCGTCGACATGAAGGAGGA 17050 Query 75391 CTCAATCAACGGTATCTATGGAACTCTTACGGAGT-GTGCGCAAATCTCAAAGTGGGCTG 75449 | || | || ||||||| || |||| || | |||| ||||| ||| ||| | Sbjct 17049 CAGCATTGAGGGCATCTATGACAC-CTTAAAGACTTGTGCTATGATCTCTAAGATGGCGG 16991 Query 75450 GGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTAT-TCGGGGG-AC 75507 | || ||||| || || | || | | |||| ||| || ||| || || Sbjct 16990 GTGGAATTGGTCTGAACGTGCACCGCATCCGTGCCACCGG--CTCATACATCGCTGGCAC 16933 Query 75508 AAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTA 75567 || ||| || |||| |||| |||||||| || || || ||| ||| || || || Sbjct 16932 TAACGGTACCTCTAATGGCATTACCCCAATGCTGCGGGTCTTCAACAACACCGCCCGATA 16873 Query 75568 TGTAAATCAAGCGGG------GCGTCGCAAGGGGTCCATCGCGGTCTACTTGGAACCATG 75621 || | || | || ||||| | || || |||| ||||| | || ||||| Sbjct 16872 CGTCGACCAGGGTGGCAACAAGCGTCCC---GGTGCCTTCGCTATCTACCTTGAGCCATG 16816 Query 75622 GCATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCG 75681 ||| |||||| | | ||||||||||| | || ||||| ||| | || ||| || Sbjct 16815 GCACGCCGATGTATTCGAGTTCCTTGACCTGCGCAAGAACCACGGTAAGGAGGAGATCCG 16756 Query 75682 GTGTAGAGATCTCTTTTCAT-CCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGG 75740 | ||||| ||| | | |||| ||||| || || ||||||||||||||||| ||| Sbjct 16755 AGCCCGTGATCT-TTTCCTTGCCCTCTGGATCCCCGATCTTTTCATGAAGCGGGTCGAGA 16697 Query 75741 AGGGTGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGTGG 75800 || ||| | ||| | || | || || || || || || ||| ||||| | Sbjct 16696 AGAACGGTGACTGGACCCTGATGTGCCCTAACGAGTGTCCTGGCCTCGCCGACTGCTACG 16637 Query 75801 GTGAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGC---CAATGCGA 75857 ||||||||||||| || |||||| |||| || |||||||| | | ||| | | Sbjct 16636 GTGAGGAGTTTGAGGCTCTCTACGAGCAGTACGAGAAGGAGGGTCGTGGTCGCAAGACCA 16577 Query 75858 CTGTACCAGCCGCCGATGTT-TGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACA 75916 || | ||| | || | | ||| | || |||||| | | ||||| |||||||| | Sbjct 16576 -TGAAG--GCC-CAGAAGCTGTGGTATGCCATTCTCGAGGCTCAGACTGAGACTGGCAAC 16521 Query 75917 CCATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACA 75976 || | ||||| |||||||| ||| |||||| ||||| ||||| |||| || Sbjct 16520 CCCTTCATGCTGTACAAGGACCACGCCAACCGGAAGAGCAACCAGAAGAACCTGGGTACC 16461 Query 75977 ATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCT 76036 ||| ||||| || |||||||| || || | |||||| | | |||||| || Sbjct 16460 ATCCGAAGCTCCAACCTTTGCACTGAGATCATTGAGTACTCTGCCCCAGATGAGGTCGCC 16401 Query 76037 GTTTGCAATTTGGCATCAATCGCCCTTCCAAAGTATGTCAATGAAGA-GACTCGCACTTT 76095 || ||||| ||||| || || || || || ||||| ||| | ||| ||| Sbjct 16400 GTGTGCAACTTGGCCTCCATTGCTCTGCCCGCATATGT---TGACTACGACAACAACTGC 16344 Query 76096 TG--ATTATGAAAAACTTCATGAAATCACAAAGATTGTTACCAAAAATCTAAACCGAGTC 76153 | | | | | | || || | || || | || | || || ||| || Sbjct 16343 TACAACTTCCAGCAGTTGCACGAGGTTACCCAGGTCGTCGTCCGCAACCTGAACAAGATC 16284 Query 76154 ATTGACAGAAATTTTTATCCCGTTGAGACTGCGCGAAAGTCTAATATGCGACACAGACCT 76213 ||||| || || || || || || || || ||||||||| ||||| Sbjct 16283 ATTGATGTCAACCACTACCCGGTCAAGGAGGCCTACAACAGCAACATGCGACACCGACCT 16224 Query 76214 ATTGGTTTGGGTGTTCAAGGTCTCGCGGATGTATTTATTTTGTGCCGCTACGCAT----- 76268 |||||| | || ||||| ||||| || || | ||| | | | |||||||| Sbjct 16223 ATTGGTGTCGGCGTTCAGGGTCTTGCCGACGCATTCTT-----GGCACTACGCATGCCTT 16169 Query 76269 TTGATTCAGATGAAGCCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCACGCAT 76328 | || || || ||| ||| |||| | ||||| || ||||| || ||||| Sbjct 16168 TCGACTCCCCGGAGGCCCGTGAGCTGAACAAGCAGATCTTCGAGACCATCTACCACGCTG 16109 Query 76329 CCCTGGAGGCGAGTTGTGAATTGGCTGAAGCCCAAGGTTCCTATGAGACATTTGAGGGTT 76388 |||| || |||| | || | | | || |||| |||||| ||||| Sbjct 16108 CCCTCACCGCATCAAGTGACATTGCCAAGGTGGAGGGCCCCTACAAGACATACGAGGGCA 16049 Query 76389 CTCCCGCGTCCCAAGGGGTGCTTCAGTTTGATATGTGGGAAGGTGAAACCAAGCT-CAAC 76447 |||| || ||||| | || ||||| || |||||| || || || || | | | Sbjct 16048 GCCCCGTCTCACAAGGCATCCTGCAGTTCGACATGTGG-AATGTCAAGCCCTCCGACCTC 15990 Query 76448 TACGACTGGGATGTTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTG 76507 | |||||||||| |||||||| |||||||||| ||| |||| ||||| || ||| Sbjct 15989 TGGGACTGGGATGCGCTCAAGGAGAAGATCAAGGAGACTGGTGTTCGCAACAGCCTGTTG 15930 Query 76508 ATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAA 76567 ||||||||||||| || || || || | || ||| |||| || ||||| |||||||| Sbjct 15929 CTGGCACCAATGCCCACTGCGTCGACGTCGCAGATCCTGGGCAACAATGAGTGCTTTGAG 15870 Query 76568 CCATACACAACAAACATCTACCTGAGAAGAACCCTCGCAGGTGAGTTTGTCATTGTCAAC 76627 |||||||| | |||||||||| | || | ||||| || ||||| | |||||| Sbjct 15869 CCATACACCTCCAACATCTACCAGCGACGTGTGCTCGCTGGCGAGTTCCAGGTCGTCAAC 15810 Query 76628 AAGCACCTCGTCAATGACCTCAAGAAGATTGGTCTCTGGTCCAAGGATATGAAGGATCTC 76687 ||| ||| || || | || | || | ||||| ||| |||||| | | Sbjct 15809 CCTTGGCTCCTCAGGGATCTGACAGAGCTCGGCTTGTGGTCTGAGGCCATGAAGAACCGT 15750 Query 76688 ATGGTGAAAGCGGGTGGTTCCATTCAAAATATCTCAGATATCCCAGATGATATCAAGAAT 76747 || | | || |||||||||||| || || | ||||| | |||||||||| Sbjct 15749 ATCATCGCCGAGGATGGTTCCATTCAGAACATTCCTAGCATCCCGGCTGATATCAAGGCC 15690 Query 76748 CTCTACCGCACAGTGTGGGAAATCAAGATGAAAGATG-TCATTG---ACATGGCCGCAGA 76803 |||||| || || ||||| ||| | ||| | ||||| | ||||| || || Sbjct 15689 CTCTACAAGACCGTCTGGGAGATC----TCTCAGAGGACCATTGTGCAGATGGCTGCTGA 15634 Query 76804 TCGTGGTCGCTTCATTGATCAAAGTCAAAGTATGAATCTATTCATG-GAAAGTCCAACGA 76862 |||||| |||||||||||| ||| | | || | |||| | || ||| | | Sbjct 15633 CCGTGGTGCCTTCATTGATCAGTCTCAGTCTCTCAACATCCACATGAGGGAG-CCATCCA 15575 Query 76863 TGTCCAAGCTCTCTTCTATGCATATGTACGCGTGGAAACAGGGGCTCAAAACCGGAATGT 76922 || |||| || | ||||| | || ||||| | || ||||| || || |||| Sbjct 15574 TGGGCAAGATCACCAGCATGCACTTCGCCGGCTGGAAGCTCGGTCTCAAGACTGGCATGT 15515 Query 76923 ACTATCTCCGATCAAAGGCGAAAGCCCGACCAATTCAGTTCA 76964 |||| ||||| | |||| ||| ||| || ||||||| Sbjct 15514 ACTACCTCCGCACTCAGGCAGCTGCCGCACCCATCCAGTTCA 15473 >seq56 Length=117397 Score = 105 bits (116), Expect = 8e-18 Identities = 293/448 (65%), Gaps = 10/448 (2%) Strand=Plus/Minus Query 65074 GCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCATTCTGC 65133 ||| |||| || |||| || || || ||||| ||||||||| ||| ||||| | Sbjct 53498 GCCCAGCGACTGGTTGCCTTCGCTGCCGTCGAGGGCATCTTCTTCAGCGGCGCATTCGCC 53439 Query 65134 GCTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAATGAACTT 65193 | |||| ||| | |||||||| || |||||||| ||||| |||||| || || || Sbjct 53438 TCCATTTTCTGGCTCAAGAAGCGTGGCCTCATGCCTGGCCTGACCTTCTCCAACGAGCTC 53379 Query 65194 ATTTCCCGAGATGAGGGTCTCCACCAGGAGTTTGCCGTGGAGCTCTTCAAGACTTTGCGT 65253 ||||| || ||||||||||| ||| || || ||| || ||| || | Sbjct 53378 ATTTCTCGTGATGAGGGTCTGCACACCGACTTCGCCTGTCTCCTGTTCTCTCACCTGAGG 53319 Query 65254 AATAGACCCACTACCGAAACTATCCACGCCATCGTGAAAGAGGCGGTTGAGATTGAGAAA 65313 || | || | | | | || | | |||| | | ||||| || | || ||||| Sbjct 53318 AACCGTCCAAGCAAGCAGCGTGTCGAGGACATCATCACCGAGGCCGTCGCCATCGAGAAG 53259 Query 65314 GGGTTCATCTTGGACGCACTCCCATGTAATCTCATCGGTATGAACTCTGAGAAGATGTCC 65373 | |||| | || || || ||||| ||| |||| |||||||| | ||| Sbjct 53258 GAGTTCTTGACTGAGGCTCTGCCATGCGCCCTCCTCGGCATGAACTCCAACCTCATGAAG 53199 Query 65374 GAGTACATTGAGTATGTGTCGGATCGTCTCCTCAAACAAGTTGGGGTGCCACCCA----- 65428 ||||||| |||| ||| | || |||||||| | |||| || | | Sbjct 53198 CAGTACATCGAGTTTGTTGCCGACCGTCTCCT-GGTCGCTCTGGG----CAACGAGAAGG 53144 Query 65429 TTTGGAACGCGAAGAATCCATTTGACTTTATGGAAAACATTAGCCTTGATGGGAAGACCA 65488 ||| || || ||| || || ||||| ||||| ||||| || | ||| ||||||| Sbjct 53143 TTTACAAGTCGTCGAACCCCTTCGACTTCATGGAGAACATCTCTCTCGGTGGCAAGACCA 53084 Query 65489 ACTTCTTTGAGAAGCGAGTTGGGGACTA 65516 |||||||||||||||| || || ||||| Sbjct 53083 ACTTCTTTGAGAAGCGTGTCGGTGACTA 53056 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596562858763520