Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20ampelina_20[genbank_20GCA_5F001630405.1_202016-04-25] 904 sequences; 59,495,866 total letters Query= NC_020864.1 Length=205622 Score E Sequences producing significant alignments: (Bits) Value seq352 284 2e-71 seq157 183 4e-41 seq427 178 2e-39 seq48 154 2e-32 seq230 149 8e-31 seq123 114 2e-20 >seq352 Length=41251 Score = 284 bits (314), Expect = 2e-71 Identities = 484/698 (69%), Gaps = 3/698 (0%) Strand=Plus/Minus Query 195290 ATGTCTCAAGCTATTGGTATCGATTTAGGAACTACTTACTCATGTGTTGGTGTATGGCAA 195349 ||| ||| ||| ||||||| ||||| || || || ||||| ||||| ||||| | | Sbjct 4204 ATGGCTCCCGCTGTTGGTATTGATTTGGGTACCACCTACTCTTGTGTGGGTGTCTTCCGT 4145 Query 195350 AATGATCGTGTAGAGATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTACGTT 195409 |||| || | ||||| ||| | || ||||| |||||||| || || || || | ||| Sbjct 4144 GATGACCGCATTGAGATCATCGCAAACGACCAGGGAAACCGGACCACCCCTTCCTTCGTC 4085 Query 195410 GCCTTTACAGATAATGAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTATGAAC 195469 || || || || | ||| ||||| | ||||||||||| || || ||| || |||||| Sbjct 4084 GCTTTCACCGACACTGAGCGTCTGATCGGAGATGCCGCCAAGAACCAGGTCGCCATGAAC 4025 Query 195470 CCTATCAATACTGTCTTTGACGCGAAGCGTCTTATTGGTCGCAAGTTTTCGGATAAGAAA 195529 || ||| || ||||| || |||||||| | ||||| |||||||| ||| || Sbjct 4024 CCCCACAACACCGTCTTCGATGCGAAGCGGTTGATTGGCCGCAAGTTCCAGGACTCTGAA 3965 Query 195530 GTCCAAGACGATATAAAGGACTGGTCTTATGAAGTTGTTCCCGGTGTGGCTGATAAGCCT 195589 ||||| | ||| || ||| ||| | | | ||| | || | | ||| | ||||| Sbjct 3964 GTCCAGGCCGACATGAAGCACTTCCCCT-TCAAGATCATCGAGAAG-GGCGGC-AAGCCC 3908 Query 195590 ATGATTAATGTTGAATTTCACGGTGAGAAGAAACAATTTGCTCCCGAAGAAATTTCGTCT 195649 | || | ||||| || | || |||| || || | || || || ||||| || Sbjct 3907 AACATCGAGGTTGAGTTCAAGGGCGAGACCAAGACCTTCACCCCAGAGGAGATTTCCTCC 3848 Query 195650 ATGGTGTTGATTAAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGAT 195709 ||||| | | |||||| ||||| || || || | | ||||| || || || | Sbjct 3847 ATGGTCCTCACCAAGATGCGTGAGACCGCTGAGTCCTACCTGGGTGGCACCGTCAACAAC 3788 Query 195710 GCAGTTGTGACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCT 195769 || || | ||||| || || ||||||| || || || || || || || ||||||||| Sbjct 3787 GCTGTCATCACTGTCCCCGCCTACTTCAACGACTCTCAGCGTCAAGCCACCAAGGACGCT 3728 Query 195770 GCTGCTATTGCGGGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATT 195829 | | ||||| || || ||| ||| | || ||||| || || || || || || ||| Sbjct 3727 GGTCTCATTGCTGGCCTGAACGTTCTGCGTATCATCAACGAGCCTACTGCCGCGGCCATT 3668 Query 195830 GCTTATGGTCTGGACAAGAACAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGT 195889 || |||||||| |||||||| || | || || || ||||||| ||||| ||| Sbjct 3667 GCCTATGGTCTCGACAAGAAGGTCGAGGGCGAGCGCAACGTTCTGATCTTCGATCTGGGT 3608 Query 195890 GGTGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCT 195949 |||||||| || |||||||| || || | || || | ||||| ||||| || ||| | Sbjct 3607 GGTGGTACTTTCGATGTCTCGCTCCTGACCATCGAGGAGGGTATCTTCGAGGTTAAGTCC 3548 Query 195950 ACTGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGA 195987 || || ||||| ||||| || |||||||| || ||||| Sbjct 3547 ACCGCCGGTGACACTCACCTGGGTGGTGAGGACTTCGA 3510 >seq157 Length=302622 Score = 183 bits (202), Expect = 4e-41 Identities = 178/229 (78%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||| ||||| ||||| || || || ||||||||||| ||||| ||||| || Sbjct 142473 ATGCAGATCTTCGTGAAGACCCTCACGGGCAAGACTATCACCCTTGAGGTGGAGTCTTCC 142414 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||| ||||| || |||| ||||||| || || |||||||||||||| || || ||| Sbjct 142413 GACACCATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAAGGCATTCCCCCAGACCAG 142354 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || || || || || || || || ||||| || || || ||||||||| | || |||||| Sbjct 142353 CAGCGTCTGATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGTACCCTCTCCGACTACAAC 142294 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGTG 172090 | || |||||||| || || ||||| || || | || || ||||||| Sbjct 142293 ATCCAGAAGGAGTCCACCCTGCACCTGGTCCTGCGCCTGCGTGGTGGTG 142245 >seq427 Length=29395 Score = 178 bits (196), Expect = 2e-39 Identities = 176/228 (77%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||| ||||| ||||| || || || || ||||| |||||||| ||||| || Sbjct 25014 ATGCAGATCTTCGTGAAGACCCTCACAGGCAAGACCATCACGCTCGAGGTCGAGTCCTCC 25073 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 || || ||||| || |||| ||||||| ||||| ||||| ||||| || || || ||| Sbjct 25074 GATACCATCGACAATGTCAAGTCCAAGATCCAAGACAAGGAGGGCATCCCCCCTGACCAG 25133 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || || ||||| ||||| || || || || || || || || |||||| | || |||||| Sbjct 25134 CAGCGTCTTATCTTTGCCGGCAAGCAACTCGAGGACGGCCGCACCCTCTCCGACTACAAC 25193 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGT 172089 |||||||||||||||| || || || || || | ||||| || ||| Sbjct 25194 ATTCAAAAGGAGTCTACCCTCCATCTCGTCCTCCGTCTTCGTGGCGGT 25241 Score = 167 bits (184), Expect = 3e-36 Identities = 175/230 (76%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 171860 GTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGT 171919 ||||||| ||||| || || || || ||||| || || || ||||||||||| ||||| | Sbjct 25240 GTATGCAGATCTTCGTCAAGACTCTGACTGGCAAGACCATTACCCTCGAGGTCGAGTCCT 25299 Query 171920 CAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATC 171979 | || || ||||| || |||| ||||||| || || ||||| || || || || || | Sbjct 25300 CTGATACCATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGTATCCCCCCAGACC 25359 Query 171980 AGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACA 172039 |||| || || || || ||||| || |||||||| || || || |||||| | || |||| Sbjct 25360 AGCAGCGTCTGATCTTCGCTGGAAAGCAGCTTGAGGACGGCCGCACCCTCTCCGACTACA 25419 Query 172040 ACGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGT 172089 || |||| ||||| || ||||| ||||| || || | || || |||||| Sbjct 25420 ACATTCAGAAGGAATCCACTCTTCACCTGGTCCTCCGCCTCCGTGGTGGT 25469 >seq48 Length=122101 Score = 154 bits (170), Expect = 2e-32 Identities = 457/695 (66%), Gaps = 15/695 (2%) Strand=Plus/Minus Query 78059 CCTACTTTGTTTAATGCAGGTACTCCCCGTCCACAGATGTCATCTTGTTTCCTACTTGCA 78118 || || ||||| ||||| || ||||| | || ||| ||||||| || ||||| | | Sbjct 17120 CCCACATTGTTCAATGCTGGCACTCCTCAGCCCCAGCTGTCATCATGCTTCCTCGTCGAC 17061 Query 78119 AATAAGGAGGACTCTATTAATGGTATATACGGGACTCTCACAGAGT-GTGCTCAGATTTC 78177 | ||||||||| ||| | || || || | || || | ||| | ||||| ||| || Sbjct 17060 ATGAAGGAGGACAGCATTGAGGGCATCTATGACAC-CTTAAAGACTTGTGCTATGATCTC 17002 Query 78178 TAAGTGGGCTGGTGGTATAGGTCTTCATATTCACGATGTTCGTGCAAACAAGTCCAGGAT 78237 |||| ||| ||||| || ||||| | | ||| | ||||| | | || || Sbjct 17001 TAAGATGGCGGGTGGAATTGGTCTGAACGTGCACCGCATCCGTGCCACCGGCTCATACAT 16942 Query 78238 TAGAGGAACTAATGGTCAGTCTGATGGAATTATTCCTATGCTTAGGGTATTCAATGCTAC 78297 || ||||| ||| ||| |||| |||| || ||||| |||| ||||| || Sbjct 16941 CGCTGGCACTAACGGTACCTCTAATGGCATTACCCCAATGCTGCGGGTCTTCAACAACAC 16882 Query 78298 AGCACGCTATGTCAACCAAGCGGGTCGTAGGAAGGG-----GT-CATTCGCTATGTACCT 78351 || || || ||| |||| |||| | | ||| | || | |||||||| ||||| Sbjct 16881 CGCCCGATACGTCGACCA---GGGTGGCAACAAGCGTCCCGGTGCCTTCGCTATCTACCT 16825 Query 78352 TGAACCTTGGCACGCCGATGTAATGGATTTTTTGGAACTTCGTCTCAACCAGGGTGACGA 78411 ||| || ||||||||||||||| | || || | || || || ||||| ||| | || Sbjct 16824 TGAGCCATGGCACGCCGATGTATTCGAGTTCCTTGACCTGCGCAAGAACCACGGTAAGGA 16765 Query 78412 GGAAGCTCGATGCAGGGATTTATTCACTGCTATGTGGATTCCGGATCTTTTTATGAAGAG 78471 ||| ||| | | ||| | ||| ||| | ||||| || |||||||| |||||| | Sbjct 16764 GGAGATCCGAGCCCGTGATCTTTTCCTTGCCCTCTGGATCCCCGATCTTTTCATGAAGCG 16705 Query 78472 AGTTGAGGAAGGA-GGTAAATGGTCTCTTTTCTGTCCAGATAAGACTAAGGGTCTTTCAG 78530 || || |||| | ||| | ||| | || | || || | || | || || | | Sbjct 16704 GGTCGA-GAAGAACGGTGACTGGACCCTGATGTGCCCTAACGAGTGTCCTGGCCTCGCCG 16646 Query 78531 ATGTATACGGGGAAGAATTCGAAAAATTGTACACTAAATACGAAGAGGAAGGTCTCGCTA 78590 | ||||| || || || || | ||| | ||||| |||| |||| | | Sbjct 16645 ACTGCTACGGTGAGGAGTTTGAGGCTCTCTACGAGCAGTACGAGAAGGAGGGTCGTGGTC 16586 Query 78591 TTAAGACAATTGATGCATCTGAA-CTATGGAAAGCTATTATCAAAAGTCAAACAGAGACC 78649 ||||| | ||| | | ||| || ||| | || ||| || | ||| || ||||| Sbjct 16585 GCAAGACCA-TGAAGGCCCAGAAGCTGTGGTATGCCATTCTCGAGGCTCAGACTGAGACT 16527 Query 78650 GGCACCCCGTATATGCTATACAAAGACAGCTGTAACAGAAAGTCTAACCAAAAGAACCTA 78709 |||| ||| | ||||| ||||| ||| | ||| | ||| ||||| |||||||| Sbjct 16526 GGCAACCCCTTCATGCTGTACAAGGACCACGCCAACCGGAAGAGCAACCAGAAGAACCTG 16467 Query 78710 GGTGTCATCAAAAGCTCTAACCTTTGCACAGAAAT 78744 ||| |||| |||||| ||||||||||| || || Sbjct 16466 GGTACCATCCGAAGCTCCAACCTTTGCACTGAGAT 16432 Score = 86.0 bits (94), Expect = 8e-12 Identities = 65/77 (84%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 79256 GCACCAATGCCCACTGCTTCGACGGCTCAGATCCTCGGTAATAATGAGTGTTTTGAACCA 79315 ||||||||||||||||| |||||| | |||||||| || || |||||||| ||||| ||| Sbjct 15926 GCACCAATGCCCACTGCGTCGACGTCGCAGATCCTGGGCAACAATGAGTGCTTTGAGCCA 15867 Query 79316 TACACTACAAACATATA 79332 ||||| | ||||| || Sbjct 15866 TACACCTCCAACATCTA 15850 >seq230 Length=63387 Score = 149 bits (164), Expect = 8e-31 Identities = 142/182 (78%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 171870 CTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCAGACACAAT 171929 ||| ||||| ||||| || || || ||||||||||| ||||| ||||| || ||||| || Sbjct 45838 CTTCGTGAAGACCCTGACGGGCAAGACTATCACCCTTGAGGTGGAGTCCTCTGACACCAT 45779 Query 171930 CGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAGCAACGACT 171989 ||| ||| |||| ||||||| || || ||||| |||||||| || || ||||| ||| | Sbjct 45778 CGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCAGACCAGCAGCGATT 45719 Query 171990 TATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAACGTTCAAAA 172049 || || || || || |||||||| ||||| || ||||| | || |||||| | || || Sbjct 45718 GATCTTCGCCGGCAAGCAGCTTGAGGATGGCCGCACCCTGTCCGACTACAACATCCAGAA 45659 Query 172050 GG 172051 || Sbjct 45658 GG 45657 >seq123 Length=89108 Score = 114 bits (126), Expect = 2e-20 Identities = 192/278 (69%), Gaps = 0/278 (0%) Strand=Plus/Plus Query 195710 GCAGTTGTGACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCT 195769 || ||||| || || || || || |||| || || || ||||| || ||||| || Sbjct 24421 GCCGTTGTTACCGTCCCCGCGTATTTCAACGACAACCAGCGCCAGGCTACCAAGGATGCC 24480 Query 195770 GCTGCTATTGCGGGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATT 195829 | ||| || ||||| ||| || | ||| |||| || || || || ||||| || Sbjct 24481 GGCATTATCGCCGGTCTCAACGTCCTCCGTATTGTCAACGAGCCCACGGCCGCTGCTATC 24540 Query 195830 GCTTATGGTCTGGACAAGAACAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGT 195889 || || ||||||||||||| | |||| | || | | | ||| ||||| ||| Sbjct 24541 GCATACGGTCTGGACAAGACCGAGGAGGGCGAGCGTCAGATCATCGTCTACGATCTTGGT 24600 Query 195890 GGTGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCT 195949 |||||||| || ||||| || || ||| ||| || || | ||||| || |||| Sbjct 24601 GGTGGTACCTTCGATGTGTCCCTGCTCTCTATCGACCAGGGCGTCTTCGAGGTCTTGGCT 24660 Query 195950 ACTGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGA 195987 ||||| ||||| || ||||| |||||||| || ||||| Sbjct 24661 ACTGCCGGTGACACCCATCTTGGTGGTGAGGACTTCGA 24698 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657854966154880