Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20ampelina_20[genbank_20GCA_5F001630405.1_202016-04-25] 904 sequences; 59,495,866 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq25 159 4e-33 seq56 149 8e-30 seq24 143 3e-28 seq54 122 1e-21 seq48 116 5e-20 seq534 98.7 1e-14 seq127 96.9 4e-14 seq1 96.9 4e-14 seq224 93.3 5e-13 >seq25 Length=132865 Score = 159 bits (176), Expect = 4e-33 Identities = 241/338 (71%), Gaps = 6/338 (2%) Strand=Plus/Plus Query 1573968 GAGGCCGTGCTCGAACTCAACGCGTCGGACGAGCGCGGCGTCGACGTCGTGCGCAAGATC 1574027 ||||| ||||| || |||||||| || || ||||| || ||||||| |||||||| Sbjct 77805 GAGGCGGTGCTGGAGCTCAACGCCTCAGATGAGCGAGGAATCGACGTGGTGCGCAACCGG 77864 Query 1574028 ATCAAGCACCACGCCTCCAAGAGGATCGACCTGCCGCCCGGACGCCACAAGGTGATCATC 1574087 |||||| | ||| |||| | || |||||| |||| ||||||||| | | ||| Sbjct 77865 ATCAAGGGCTTCGCGCAGAAGAAGGTCACGCTGCCGGCCGGCCGCCACAAGATCGTTATC 77924 Query 1574088 CTCGACGAGGCCGACTGCCTCACGTCGGCGGCCCAGCAGGCCCTGCGGTCCACCATGGAA 1574147 || |||||||||||| || | || |||| || |||||||| ||| || || ||||| Sbjct 77925 CTGGACGAGGCCGACAGCATGACCTCGGGCGCGCAGCAGGCGCTGAGGCGGACGATGGAG 77984 Query 1574148 AAGCACACCAACACGACGCGCTTTGCCCTGGCGTGCAACACGTCGTCGATGGTCATCGAG 1574207 | || ||||||||||||| |||||| | ||||||||| ||| | | |||||||| Sbjct 77985 ATCTACTCCAACACGACGCGATTTGCCTTCGCGTGCAACCAGTCCAACAAGATCATCGAG 78044 Query 1574208 GCCCTCCAAAGTCGC--TGCGCCATTCTGCGCTTTGTGCGCCTGGGTGACGCCCAGATAC 1574265 || | | |||||| || || || ||||| | | ||| ||| |||| |||| | Sbjct 78045 --CCACTACAGTCGCGGTGTGCGATCCTGCGGTACGCGCGGCTGACAGACGGCCAGGTGG 78102 Query 1574266 GCGCGCGCCT-ATGCGATATTGTCGCCGCCGAAAAGGT 1574302 |||||| |||| | || ||| ||||| ||||| Sbjct 78103 TGAAGCGCCTGATGC-AGATCATCGAGGCCGAGAAGGT 78139 >seq56 Length=117397 Score = 149 bits (164), Expect = 8e-30 Identities = 189/257 (74%), Gaps = 5/257 (2%) Strand=Plus/Plus Query 868691 GCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATC 868750 ||||| ||| || || || ||| ||| || |||||||||||||| |||| ||||| Sbjct 53047 GCCTTCTGGTAGTCACCGACACGCTTCTCAAAGAAGTTGGTCTTGCCACCGAGAGAGATG 53106 Query 868751 AACTCCATCCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCC--GAGCGACG 868808 |||||| | ||| ||||| | || |||||| ||| ||| || |||||| Sbjct 53107 TTCTCCATGAAGTCGAAGGGGTTCGACGACTTGTAAACCTTCTCGTTGCCCAGAGCGA-- 53164 Query 868809 CGAGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGA 868868 | || || |||||||| ||||||||||||||||| ||||||| || ||||||||||| Sbjct 53165 CCAGGAGACGGTCGGCAACAAACTCGATGTACTGCTTCATGAGGTTGGAGTTCATGCCGA 53224 Query 868869 TGAGCGCCACCGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCGACGA 868928 ||| || ||||| | ||| ||| ||||| |||||||| ||||||||||| || Sbjct 53225 GGAGGGCGCATGGCAGAGCCTCAGTCAAGAACTCCTTCTCGATGGCGACGGCCTCGGTGA 53284 Query 868929 TGATCTGCCTGGGCACG 868945 |||| | ||| | |||| Sbjct 53285 TGATGT-CCTCGACACG 53300 Score = 111 bits (122), Expect = 2e-18 Identities = 127/170 (75%), Gaps = 3/170 (2%) Strand=Plus/Plus Query 869201 TCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTTCTTGAGCCAAAAGATGGCGCAG 869260 |||||| |||| ||||| ||||||||||| |||||||||||||| || |||| | | Sbjct 53383 TCGTTGGAGAAGGTCAGGCCAGGCATGAGGCCACGCTTCTTGAGCCAGAAAATGGAGGCG 53442 Query 869261 AAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAGCCGATGAGCCGCTCGGCAAAG 869320 || ||| ||| ||||||||||||||||| || ||| | | || |||| |||| || Sbjct 53443 AATGCGCCGCTGAAGAAGATGCCCTCGACGGCAGCGAAGGCAACCAGTCGCTGGGCATAG 53502 Query 869321 GTGTCGAGGCCCTCCTTGTTGATCCACTTCATCGCCCAGTCGGCCTTTTT 869370 ||| || ||| | ||||||||| | |||||||||||||| || Sbjct 53503 GTGGACTCGCGATCC---TGGATCCACTTGAGAGCCCAGTCGGCCTTCTT 53549 >seq24 Length=388959 Score = 143 bits (158), Expect = 3e-28 Identities = 108/127 (85%), Gaps = 0/127 (0%) Strand=Plus/Plus Query 1592168 CTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGG 1592227 ||||| ||| | || ||||| ||||||||| | ||||||||| | ||||| ||| | || Sbjct 354772 CTCTTCGAGATCATTCTCGCTGCCAACTACATGGACATCAAGGCGCTGCTTGATGTCGGC 354831 Query 1592228 TGCAAGTCTGTGGCCAACATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTT 1592287 |||||| |||||||||||||||||||||||||||| || |||||||| |||||||| || Sbjct 354832 TGCAAGACTGTGGCCAACATGATCAAGGGCAAGTCCCCAGAGGAGATTCGCAAGACGTTC 354891 Query 1592288 AACATCA 1592294 ||||||| Sbjct 354892 AACATCA 354898 >seq54 Length=118440 Score = 122 bits (134), Expect = 1e-21 Identities = 112/139 (81%), Gaps = 2/139 (1%) Strand=Plus/Plus Query 19047 GACAGCATCGGCGGCACGGTGACGTGCGTGTGTC-GCAACGTGCCGGCAGGCCTCGGCGA 19105 |||||||||| || ||| || || ||||| | || | |||||||| | || || ||||| Sbjct 74725 GACAGCATCGACGACACCGTCACCTGCGT-TATCAGGAACGTGCCCACGGGGCTGGGCGA 74783 Query 19106 GCCGTGCTTTGACAAGATCGAGGCCGCGCTCGCCCACGCCATGCTGTCGATCCCGGCCAC 19165 ||| ||||| ||| |||| |||||| || ||||||||||||||||| ||||| |||| Sbjct 74784 GCCCTGCTTCGACGAGATGGAGGCCCTTCTGGCCCACGCCATGCTGTCCATCCCCGCCAA 74843 Query 19166 CAAGGGATTCGAGATTGGC 19184 |||||| |||||||| ||| Sbjct 74844 CAAGGGCTTCGAGATCGGC 74862 >seq48 Length=122101 Score = 116 bits (128), Expect = 5e-20 Identities = 324/491 (66%), Gaps = 21/491 (4%) Strand=Plus/Plus Query 1630065 CTGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTTGGA 1630124 |||||||||||| || || |||| ||| ||||| || ||||| || | ||| || || Sbjct 16863 CTGGTCGACGTATCGGGCGGTGTTGTTGAAGACCCGCAGCATTGGGGTAATGCCATTAGA 16922 Query 1630125 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAAAGCC 1630184 ||||| ||||| || | ||| | ||||| ||| || | |||| || | || Sbjct 16923 GGTACCGTTAGTGCCAGCGATGTATGAGCCGGTGGCACGGATGCGGTGCACGTTCAGACC 16982 Query 1630185 GATGCCGCCGGCCGACTTGGAGATGAGCGCGC-ACTGTTTGAGCGTGTCGTAGATGCCCT 1630243 || || || ||| ||| ||||| | || | | | ||| || ||||| |||||||||| Sbjct 16983 AATTCCACCCGCCATCTTAGAGATCATAGCACAAGTCTTTAAG-GTGTCATAGATGCCCT 17041 Query 1630244 CGATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGTGC 1630303 | || ||| |||||||||| ||||| ||||| || || || || || | |||| Sbjct 17042 CAATGCTGTCCTCCTTCATGTCGACGAGGAAGCATGATGACAGCTGGGGCTGAGGAGTGC 17101 Query 1630304 CGGCGTTGAAGAGCGTGGGCGTCGCCGCGGTGAACAACTGCCGCGACATGGCGTCGTAGG 1630363 | || ||||| | ||||| | || ||||| |||| ||||| || ||||| Sbjct 17102 CAGCATTGAACAATGTGGGGGAGGCATGTGTGAAGAACTTGTTTGACATCAGGTTGTAGG 17161 Query 1630364 TGGCGAGCACGCGCGCCAGCGCATCGTCCACGTCGGCAAACCCATAGTGGCCGATGGCGA 1630423 | | | || | | | | ||||||| || ||| || |||| |||| Sbjct 17162 TCTCAATGACCCTCTCGA---CATCGTC----TC------CCC--AGATACCGACAGCGA 17206 Query 1630424 CGCGCATGAGCATGTACTGGGGCCGCTCGACGACGACGCCGCGCACCTTGGTCAGGTAGG 1630483 | ||||||| ||||| ||| ||||||||||| || || | |||| ||||| | Sbjct 17207 CACGCATGATCATGTGCTGTGGCCGCTCGACAACTTTACCATCGAGCTTGAGGAGGTACG 17266 Query 1630484 ACCGGCGCATGGTCATGAGGCCAAAGTA--GGAAAAGGCAAAATCGCGGTCGTGGCGGAT 1630541 | || | ||| ||| ||| ||||| || || | || || ||||||| | || Sbjct 17267 AACGCTCGAGTGTCTTGAAGCCGAAGTATTGGTAA--CCGAAGTCACGGTCGTAGACAAT 17324 Query 1630542 GGCGGCGTCGA 1630552 ||||| ||||| Sbjct 17325 GGCGGAGTCGA 17335 Score = 86.0 bits (94), Expect = 8e-11 Identities = 100/135 (74%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 1627868 CGTCGGCGAGGCCCTGCACGCCGACGCCCATCGGCCGGTGGCGCAGGTTCGAGTGGCGGG 1627927 ||||||| || ||||| |||||||| || || || ||||| |||| ||| || | || Sbjct 16193 CGTCGGCAAGACCCTGAACGCCGACACCAATAGGTCGGTGTCGCATGTTGCTGTTGTAGG 16252 Query 1627928 CCTCGGGCACCGGGTAGTGGTTGATGTCGATCACGCGGTTGAGGTTGCCCACCACGACCT 1627987 |||| |||||||||||||||| || || | ||| ||||||| || ||||||| Sbjct 16253 CCTCCTTGACCGGGTAGTGGTTGACATCAATGATCTTGTTCAGGTTGCGGACGACGACCT 16312 Query 1627988 GGACGATCTCGTGCA 1628002 || | |||||||| Sbjct 16313 GGGTAACCTCGTGCA 16327 >seq534 Length=272723 Score = 98.7 bits (108), Expect = 1e-14 Identities = 140/191 (73%), Gaps = 7/191 (4%) Strand=Plus/Plus Query 1726966 GTCGAGGTCGGGGTCGCTGGCCAGGCCCTTCCACCCGACGGTCGTGCGCGGCTTTTCGAC 1727025 ||||| ||| |||||| || |||||||||||| |||||||| ||||| ||||| |||| Sbjct 222741 GTCGACGTCCGGGTCGTTGATCAGGCCCTTCCAGCCGACGGTGGTGCGGGGCTTCTCGAG 222800 Query 1727026 ATAGGCGCGCATGACCACGCAAAGCGCGTCGCC-GACCTCGTCTCGGACAAAGGCGCGCA 1727084 ||||||||||||| ||||| || |||||| ||| | | ||||||| | | | Sbjct 222801 GTAGGCGCGCATGATGACGCAGAG---GTCGCCGGACAGCCTGTCGGACAGCTCCTTG-A 222856 Query 1727085 GGC-GTCGGCCATAGTCGACGACGGCCGCCGGGTCGTGCGCCGAACACGGACCAACGATA 1727143 | | ||||| | || |||| | ||| || |||||||| || || || || |||| Sbjct 222857 GCCTGTCGG-CGTACTCGAGGGCGGTGGCAGGGTCGTGGATGGAGCAGGGGCCGACGACG 222915 Query 1727144 ACCAGCAGCCG 1727154 || ||||| || Sbjct 222916 ACGAGCAGGCG 222926 >seq127 Length=87772 Score = 96.9 bits (106), Expect = 4e-14 Identities = 116/158 (73%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 1254381 GTCTGGATCTCGCGCGTGCCGATCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCC 1254440 ||||||||||| || | | ||| ||| |||||| || || || | |||| Sbjct 77920 GTCTGGATCTCTCGGGAGGAGATGGTGGACTTCTTGTTGTAGGCAGCAAGCTTGGAGGCC 77979 Query 1254441 TCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATGACCGACATCGACTTG 1254500 |||||| ||| ||| |||| ||||||||||| |||||||||| || ||||| | | Sbjct 77980 TCGGTGGCGACGCGCTCGAAGATGTCGTTGACGAACGAGTTCAGGATGGACATGGCACGG 78039 Query 1254501 TTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCAC 1254538 |||||||| || ||||||||| ||||||||||| || Sbjct 78040 TTGGAGATACCAGTGTCGGGGTGGACCTGCTTGAGGAC 78077 >seq1 Length=796877 Score = 96.9 bits (106), Expect = 4e-14 Identities = 100/131 (76%), Gaps = 0/131 (0%) Strand=Plus/Plus Query 18358 CCGCGGCCCTCACACGCCGACTACACCTACATGGCCAAGTACGGCATCAAGGCGTCGTCG 18417 ||||| ||||| |||||||||| || ||| | | ||||| || | |||||| || || Sbjct 450819 CCGCGCCCCTCCCACGCCGACTGGACTTACCTTGAGAAGTATGGTACCAAGGCCTCCTCT 450878 Query 18418 GGCGGAGGCCGGTCGTCTGCCCGCGAGACCCTCATGCGCGTCGCCGCCGGCGCGGTCGCC 18477 || || |||||| ||||||||||| | ||||||||||||||||| || ||| Sbjct 450879 GGGGGCGGCCGGAGCAGCGCCCGCGAGACTATTGCCCGCGTCGCCGCCGGCGCTGTTGCC 450938 Query 18478 GAGAAATGGCT 18488 ||||||||||| Sbjct 450939 GAGAAATGGCT 450949 >seq224 Length=283779 Score = 93.3 bits (102), Expect = 5e-13 Identities = 191/280 (68%), Gaps = 7/280 (3%) Strand=Plus/Minus Query 1852040 AGGCCGATCTTGGAGGCGGCCTCGCTGGCGCTCATCTTGCCGCTCTCGGTGAGGCCCGGC 1852099 ||| ||||||||||| || |||||||| ||||||||||| || ||||||||| Sbjct 47286 AGGTCGATCTTGGAGTTGGGGTCGCTGGCCGACATCTTGCCGCCCTGC---AGGCCCGGC 47230 Query 1852100 ACGAGCGGGTTGAGCAGGTGGAAGCGCTTCCGATAGCCGAGGACCGGCAGGTGGTCGCGC 1852159 || | ||||| | | ||| ||| | || || || || |||||| || Sbjct 47229 ACCATGGGGTTCATGATGTGTGCGCGTTGCCTGTACCCCAGCTTCGGCAGCCACTCCTTT 47170 Query 1852160 GCAAAGGCAAATATCTTGCGCTGGTCGCGCCCGCCAAACTGGGCGTCGACGTCGAGGTGC 1852219 ||| | || | |||||||||||| ||||| ||||| | || ||||| |||| | Sbjct 47169 GCAGCTGTGAACAGCTTGCGCTGGTCCACGCCGCCGAACTGCACATCCACGTCCAGGTAC 47110 Query 1852220 TGCTCGTCGAGGGCCTGCATGAGCGGGTAGAGCACGTTGCTCAGGAGCGGGTT-GCGGTC 1852278 |||||||| | | |||||| || ||||| |||| | || | | ||| || || Sbjct 47109 TGCTCGTCCAAGACCTGCAGGATGGGGTACAGCAGCCCGGACAAAGGGGCGTTGGCCGT- 47051 Query 1852279 CATCTTGACCACCTGAGCGGCGGCCT--TTTGCGCCGTGC 1852316 | |||||| |||| |||| |||||| || ||| ||||| Sbjct 47050 CTGCTTGACGACCTCAGCGCCGGCCTTCTTGGCGTCGTGC 47011 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6107065013526568