Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20ampelina_20[genbank_20GCA_5F001630405.1_202016-04-25] 904 sequences; 59,495,866 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq157 104 2e-17 seq427 102 7e-17 >seq157 Length=302622 Score = 104 bits (114), Expect = 2e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || || || || || ||||| || || || || || | || Sbjct 142473 ATGCAGATCTTCGTGAAGACCCTCACGGGCAAGACTATCACCCTTGAGGTGGAGTCTTCC 142414 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||| ||||| ||||| || || || || || Sbjct 142413 GACACCATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAAGGCATTCCCCCAGACCAG 142354 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || ||| ||||||| ||||| || ||||| ||||| | | | | || || || ||| Sbjct 142353 CAGCGTCTGATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGTACCCTCTCCGACTACAAC 142294 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGCGG 24933 || || ||||| || || || ||| |||| |||| |||| || || || Sbjct 142293 ATCCAGAAGGAGTCCACCCTGCACCTGGTCCTGCGCCTGCGTGGTGGTGG 142244 >seq427 Length=29395 Score = 102 bits (112), Expect = 7e-17 Identities = 146/206 (71%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 24701 ACGATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCC 24760 || ||||||||||| | || || || || || || || || |||||||| || || || Sbjct 25011 ACCATGCAGATCTTCGTGAAGACCCTCACAGGCAAGACCATCACGCTCGAGGTCGAGTCC 25070 Query 24761 ACCGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGAT 24820 |||| || | || | || || |||||||||||||| || || || || || || Sbjct 25071 TCCGATACCATCGACAATGTCAAGTCCAAGATCCAAGACAAGGAGGGCATCCCCCCTGAC 25130 Query 24821 CAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTAT 24880 || || ||| | ||||||||||| || || || ||||| | | | | || || || Sbjct 25131 CAGCAGCGTCTTATCTTTGCCGGCAAGCAACTCGAGGACGGCCGCACCCTCTCCGACTAC 25190 Query 24881 AACATTCAAAAGGAATCGACACTACA 24906 |||||||||||||| || || || || Sbjct 25191 AACATTCAAAAGGAGTCTACCCTCCA 25216 Score = 98.7 bits (108), Expect = 9e-16 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || || || || || || ||||| ||||| || || || | Sbjct 25242 ATGCAGATCTTCGTCAAGACTCTGACTGGCAAGACCATTACCCTCGAGGTCGAGTCCTCT 25301 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || | || | || || |||||||| ||||| || || || || || || || Sbjct 25302 GATACCATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGTATCCCCCCAGACCAG 25361 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || ||| ||||||| || || || ||||| ||||| | | | | || || || ||| Sbjct 25362 CAGCGTCTGATCTTCGCTGGAAAGCAGCTTGAGGACGGCCGCACCCTCTCCGACTACAAC 25421 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGT 24912 ||||| |||||||| || || ||| |||| Sbjct 25422 ATTCAGAAGGAATCCACTCTTCACCTGGT 25450 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449892516157120