Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20ampelina_20[genbank_20GCA_5F001630405.1_202016-04-25] 904 sequences; 59,495,866 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq25 183 5e-40 seq56 131 3e-24 seq24 125 1e-22 seq48 111 2e-18 seq127 104 4e-16 seq224 95.1 2e-13 seq534 87.8 3e-11 >seq25 Length=132865 Score = 183 bits (202), Expect = 5e-40 Identities = 357/525 (68%), Gaps = 8/525 (2%) Strand=Plus/Plus Query 2018920 GGATCGAAAAGTACCGCCCGACAGTGCTCGACGACATCGTGGGCAACGAGCACGCCGTTG 2018979 || |||| || ||||| || | | |||||||||||||| || |||| | || | | Sbjct 77620 GGGTCGAGAAATACCGTCCCATCTTCCTCGACGACATCGTCGGAAACGTAGAGACCATCG 77679 Query 2018980 CCTACCTCAAGGCGCTGGCCGCCGACGGCAACATGCCCAACCTCTTGCTGGCGGGCCCGC 2019039 ||||||| | ||| || ||||||||||| || || | | ||| || Sbjct 77680 AGCGCCTCAAGATCATAGCCAAGGATGGCAACATGCCGCACGTCATCATCAGCGGCATGC 77739 Query 2019040 CCGGCACGGGCAAGACCACGAGCATCGCGTGCCTGGCGCGCGTGCTCTTGGGCGCGGCCG 2019099 | || | || ||||| || ||| | |||||||| ||| ||| |||||| || Sbjct 77740 CGGGAATCGGAAAGACGACCAGCGTGCTCTGCCTGGCACGCCAGCTGCTGGGCGACTCCT 77799 Query 2019100 CCGACGAGGCCGTGCTCGAACTCAATGCGTCAGACGAGCGCGGCGTGGACGTCGTGCGTA 2019159 | | ||||| ||||| || ||||| || ||||| ||||| || | ||||| ||||| | Sbjct 77800 ACAAGGAGGCGGTGCTGGAGCTCAACGCCTCAGATGAGCGAGGAATCGACGTGGTGCGCA 77859 Query 2019160 GAATCATCAAG--CATCACGCTTCGAAAAGAA--TCGACCTGCCGCCCGGCCGCCACAAG 2019215 |||||| | || ||| | ||||| || |||||| |||||||||||||| Sbjct 77860 ACCGGATCAAGGGCTTCGCGC----AGAAGAAGGTCACGCTGCCGGCCGGCCGCCACAAG 77915 Query 2019216 GTGATCATCCTCGATGAGGCCGACTGCCTTACGTCGGCGGCCCAGCAGGCCCTCCGATCG 2019275 | | ||||| || ||||||||| || | || |||| || |||||||| || | | Sbjct 77916 ATCGTTATCCTGGACGAGGCCGACAGCATGACCTCGGGCGCGCAGCAGGCGCTGAGGCGG 77975 Query 2019276 ACCATGGAAAAGTACACCAACACGACGCGGTTTGCGCTGGCCTGCAACACGTCGTCGATG 2019335 || ||||| | ||| ||||||||||||| ||||| | || |||||| ||| | | Sbjct 77976 ACGATGGAGATCTACTCCAACACGACGCGATTTGCCTTCGCGTGCAACCAGTCCAACAAG 78035 Query 2019336 GTCATCGAAGCCCTCCAGAGCCGTTGCGCCATCTTGCGCTTTGCGCGCCTCACCGACGCC 2019395 ||||||| | || ||| || || || ||| |||| | ||||| || || |||| | Sbjct 78036 ATCATCGAGCCACTACAGTCGCGGTGTGCGATCCTGCGGTACGCGCGGCTGACAGACGGC 78095 Query 2019396 CAGATCGCCGCGCGTCTGCGCGAGATTATCGACGCCGAAAAGGTC 2019440 ||| | | ||| ||| |||| ||||| ||||| |||||| Sbjct 78096 CAGGTGGTGAAGCGCCTGATGCAGATCATCGAGGCCGAGAAGGTC 78140 >seq56 Length=117397 Score = 131 bits (144), Expect = 3e-24 Identities = 190/265 (72%), Gaps = 5/265 (2%) Strand=Plus/Plus Query 793891 TGACGCCCGCCTTGGCATACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGA 793950 |||| || ||||| || || || || ||| ||| || |||||||||||||| ||| Sbjct 53039 TGACACCGGCCTTCTGGTAGTCACCGACACGCTTCTCAAAGAAGTTGGTCTTGCCACCGA 53098 Query 793951 GCGAGATCAACTCCATCCACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTCG--CACCC 794008 | ||||| |||||| | ||| ||||| | || | ||| ||||||| || Sbjct 53099 GAGAGATGTTCTCCATGAAGTCGAAGGGGTTCGACGACTTGTAAACCTTCTCGTTGCCCA 53158 Query 794009 GAGCGACGCAAGCAGGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTT 794068 |||||| | || || |||||||| || || || |||||||| ||||||| || ||| Sbjct 53159 GAGCGA--CCAGGAGACGGTCGGCAACAAACTCGATGTACTGCTTCATGAGGTTGGAGTT 53216 Query 794069 CATGCCGATGAGCGCCACGGGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGGC 794128 |||||||| ||| || ||||| | ||| | | ||||| |||||||| ||||||| Sbjct 53217 CATGCCGAGGAGGGCGCATGGCAGAGCCTCAGTCAAGAACTCCTTCTCGATGGCGACGGC 53276 Query 794129 CTCGATGATGATCTGCCTGGGCACG 794153 |||| ||||||| | ||| | |||| Sbjct 53277 CTCGGTGATGATGT-CCTCGACACG 53300 Score = 98.7 bits (108), Expect = 2e-14 Identities = 72/84 (86%), Gaps = 0/84 (0%) Strand=Plus/Plus Query 794584 GGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGTTTTCGATG 794643 || ||||||| ||||||||||||||| |||||||| ||||| ||||||||||| || || Sbjct 53660 GGCTCCTTGATGTAGGTGTCGATGAGCAGCGAGTACGTCTCAGAGTGGATGTTCTCCATC 53719 Query 794644 GCGATCTGGAAGCCATAAAAGCAG 794667 |||||||||||| || |||||| Sbjct 53720 ATGATCTGGAAGCCGTAGAAGCAG 53743 Score = 93.3 bits (102), Expect = 7e-13 Identities = 114/155 (74%), Gaps = 3/155 (2%) Strand=Plus/Plus Query 794377 AGGCCGGGCATGAGGCCGCGCTTCTTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAA 794436 ||||| ||||||||||| |||||||||||||| || |||| ||| ||| ||| Sbjct 53398 AGGCCAGGCATGAGGCCACGCTTCTTGAGCCAGAAAATGGAGGCGAATGCGCCGCTGAAG 53457 Query 794437 AAGATGCCCTCGACGGCGGCAAAGCCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCT 794496 ||||||||||||||||| || ||| | || || |||| |||| | ||| | || || Sbjct 53458 AAGATGCCCTCGACGGCAGCGAAGGCAACCAGTCGCTGGGCATAGGTGGACTCGCGATC- 53516 Query 794497 TTGTTGATCCACTTCATCGCCCACTCTGCCTTTTT 794531 | ||||||||| | ||||| || ||||| || Sbjct 53517 --CTGGATCCACTTGAGAGCCCAGTCGGCCTTCTT 53549 Score = 89.7 bits (98), Expect = 8e-12 Identities = 132/185 (71%), Gaps = 3/185 (2%) Strand=Plus/Plus Query 796175 TGAAGCGGCCGGCCAGGTTCTCAGCCACGATGCCGTCGCTGGCGGCGAAAAAGGCGAGGA 796234 ||||||| | |||||||||| ||||| || || || ||||| |||||||||| Sbjct 53772 TGAAGCGCTCCACCAGGTTCTCGTTGACGATTCCATCTGAAGCAGCGAAGAAGGCGAGGA 53831 Query 796235 CGTGCTTGATAAAGTGACGCTCGTCGTCGCTGA-GCG--AGACCCAGTGGACCGTGTCGG 796291 ||| || |||| |||||||||||| | | ||| | ||||| | | ||| Sbjct 53832 TGTGGGAGACGAAGTATCGCTCGTCGTCGGTCAGGCGGTTGCTCCAGTCGTGCAGGTCCT 53891 Query 796292 CGCCGAGGTCGACCTCCTCGGCGGTCCAAAAGGAGGCCTCGGCCTTTTTGTACATCTCCC 796351 | ||| |||| ||||||||| ||||| ||||| || ||| ||| |||||||||| || Sbjct 53892 TGGAGAGATCGATCTCCTCGGCAGTCCAGAAGGAAGCTTCGTGCTTCTTGTACATCTGCC 53951 Query 796352 ATATC 796356 | ||| Sbjct 53952 AGATC 53956 >seq24 Length=388959 Score = 125 bits (138), Expect = 1e-22 Identities = 104/127 (82%), Gaps = 0/127 (0%) Strand=Plus/Plus Query 2035629 CTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGG 2035688 ||||| ||| | || ||||| ||||||||| | ||||||||| | || || ||| | || Sbjct 354772 CTCTTCGAGATCATTCTCGCTGCCAACTACATGGACATCAAGGCGCTGCTTGATGTCGGC 354831 Query 2035689 TGCAAGACCGTGGCCAACCTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTT 2035748 |||||||| ||||||||| | |||||||||||||| || ||||| || |||||||| || Sbjct 354832 TGCAAGACTGTGGCCAACATGATCAAGGGCAAGTCCCCAGAGGAGATTCGCAAGACGTTC 354891 Query 2035749 AACATCA 2035755 ||||||| Sbjct 354892 AACATCA 354898 >seq48 Length=122101 Score = 111 bits (122), Expect = 2e-18 Identities = 286/437 (65%), Gaps = 10/437 (2%) Strand=Plus/Plus Query 2071581 GACCTCGGTGCACAGGTTGGCCGACATCG--TGGTGCCCAGGTTCTGCTGGTTGCTGGTC 2071638 || ||| ||||| ||||||| | ||| |||| |||||||||| ||||||||| || Sbjct 16431 GATCTCAGTGCAAAGGTTGGAG--CTTCGGATGGTACCCAGGTTCTTCTGGTTGCTCTTC 16488 Query 2071639 AGGTTGACGGCGTCCTTGTGCAGCATGTAGGGCGCACCCGTCTCGATCTGCGCCGTGACG 2071698 ||||| || |||||||| ||||||| |||| || ||||| |||| ||| || Sbjct 16489 CGGTTGGCGTGGTCCTTGTACAGCATGAAGGGGTTGCCAGTCTCAGTCTGAGCCTCGAGA 16548 Query 2071699 ATGGCCGACCAAATTTGGCGCGCGGGCACCGAGGTCCT-CG--CGCGGCCCTNNNNNNNN 2071755 ||||| |||| | | | || || |||| | || | || |||| Sbjct 16549 ATGGCATACCACAGCTTCTGGGCCTTCAT---GGTCTTGCGACCACGACCCTCCTTCTCG 16605 Query 2071756 NNNNNNNNNNAGAGGGCGTCAAAGGCGGCGCCGTGGCACTCGTGCAGGCCGGGCGCCTCG 2071815 |||| || ||||| | | |||| ||| ||| ||||| || |||| Sbjct 16606 TACTGCTCGTAGAGAGCCTCAAACTCCTCACCGTAGCAGTCGGCGAGGCCAGGACACTCG 16665 Query 2071816 GACGGGCAAAAGAGCGACCAGTCGCCGCCAGTCACCACGCGGCGCATAAACAGGTCGCAC 2071875 ||||| | || | |||||| ||| || | || || ||| || || ||| Sbjct 16666 TTAGGGCACATCAGGGTCCAGTCACCGTTCTTCTCGACCCGCTTCATGAAAAGATCGGGG 16725 Query 2071876 GTCCACAGGCCGTAAAAGAGATCGCGCGCCCGGTTCTCCTCCTTGCCGTGGTTCTTTTTC 2071935 |||| ||| | || ||||| || || ||| |||||||||| ||||||||||| | Sbjct 16726 ATCCAGAGGGCAAGGAAAAGATCACGGGCTCGGATCTCCTCCTTACCGTGGTTCTTGCGC 16785 Query 2071936 AGGTCGAGCCAGTCGACGAGGTCGGCGTGCCACGGCTCCAGGTAGCAGGCAAAGGCGCCC 2071995 ||||| || | |||| | ||||||||||| ||||| |||||| || ||||| || Sbjct 16786 AGGTCAAGGAACTCGAATACATCGGCGTGCCATGGCTCAAGGTAGATAGCGAAGGCACCG 16845 Query 2071996 TTGCGCTTGCCGCCGCC 2072012 |||||| ||| || Sbjct 16846 GGACGCTTGTTGCCACC 16862 Score = 87.8 bits (96), Expect = 3e-11 Identities = 174/258 (67%), Gaps = 0/258 (0%) Strand=Plus/Plus Query 2073540 CTGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTTGGA 2073599 ||||||||| || || || |||| ||| ||||| || ||||| || || ||| || || Sbjct 16863 CTGGTCGACGTATCGGGCGGTGTTGTTGAAGACCCGCAGCATTGGGGTAATGCCATTAGA 16922 Query 2073600 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAAGCC 2073659 ||||| ||||| || | ||| | ||| | ||| || | |||| || | || Sbjct 16923 GGTACCGTTAGTGCCAGCGATGTATGAGCCGGTGGCACGGATGCGGTGCACGTTCAGACC 16982 Query 2073660 GATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCCCTC 2073719 || || || ||| ||| ||||| | || || | || | || || ||||||||||| Sbjct 16983 AATTCCACCCGCCATCTTAGAGATCATAGCACAAGTCTTTAAGGTGTCATAGATGCCCTC 17042 Query 2073720 GATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGACGAGTTTTGCGGGCGCGCCGTGCC 2073779 || ||| |||||||||| | || ||||| || || || || | | ||||| Sbjct 17043 AATGCTGTCCTCCTTCATGTCGACGAGGAAGCATGATGACAGCTGGGGCTGAGGAGTGCC 17102 Query 2073780 GGCATTGAAGAGCGTGGG 2073797 |||||||| | ||||| Sbjct 17103 AGCATTGAACAATGTGGG 17120 >seq127 Length=87772 Score = 104 bits (114), Expect = 4e-16 Identities = 120/159 (75%), Gaps = 2/159 (1%) Strand=Plus/Plus Query 1485547 GTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGCGCGCCAGGCG-GCCGGC 1485605 ||||||||||| |||| | ||| ||| |||||| || || || || | ||| Sbjct 77920 GTCTGGATCTCTCGGGAGGAGATGGTGGACTTCTTGTT-GTAGGCAGCAAGCTTGGAGGC 77978 Query 1485606 CTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATGATCGACATCGATTT 1485665 ||||||| ||| ||| |||| ||||||||||| |||||||||| ||| ||||| | Sbjct 77979 CTCGGTGGCGACGCGCTCGAAGATGTCGTTGACGAACGAGTTCAGGATGGACATGGCACG 78038 Query 1485666 GTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCAC 1485704 ||||||||| || ||||||||| ||||||||||| || Sbjct 78039 GTTGGAGATACCAGTGTCGGGGTGGACCTGCTTGAGGAC 78077 >seq224 Length=283779 Score = 95.1 bits (104), Expect = 2e-13 Identities = 195/282 (69%), Gaps = 11/282 (4%) Strand=Plus/Minus Query 2411383 AGATCAATCTTGGAGGCGGCCTCGCTGGCGCTCATCTTGCCGTCCTTGGTGAGGCCCGGC 2411442 || || ||||||||| || |||||||| |||||||||| ||| ||||||||| Sbjct 47286 AGGTCGATCTTGGAGTTGGGGTCGCTGGCCGACATCTTGCCGCCCTGC---AGGCCCGGC 47230 Query 2411443 ACCAGCGGGTTGAGCAGGTGGATGCGC-TTGCG-GTAGCCCAGCGCCGGCAGGTGGTCGC 2411500 |||| ||||| | | ||| ||||| |||| ||| |||||| |||||| || Sbjct 47229 ACCATGGGGTTCATGATGTG--TGCGCGTTGCCTGTACCCCAGCTTCGGCAGCCACTCCT 47172 Query 2411501 GCGCAAAGGCAAAGATCTTGCGCTGGTCGCGCCCGCCAAACTGGGCGTCGACGTCGAGGT 2411560 ||| | || | |||||||||||| ||||| ||||| | || ||||| |||| Sbjct 47171 TTGCAGCTGTGAACAGCTTGCGCTGGTCCACGCCGCCGAACTGCACATCCACGTCCAGGT 47112 Query 2411561 GCTGCTCGTCGAGGGCCTGCATGAGCGGGTAGACGAGGTTGCTGAGCGGCGGGTT-GCGG 2411619 ||||||||| | | |||||| || ||||| | || | | || | ||| || | Sbjct 47111 ACTGCTCGTCCAAGACCTGCAGGATGGGGTACAGCAGCCCGGACAAAGGGGCGTTGGCCG 47052 Query 2411620 TCCATCTTGACCACCTGGGCGGCGGCCT--TTTGCGCCGTGC 2411659 | | |||||| |||| ||| |||||| || ||| ||||| Sbjct 47051 T-CTGCTTGACGACCTCAGCGCCGGCCTTCTTGGCGTCGTGC 47011 >seq534 Length=272723 Score = 87.8 bits (96), Expect = 3e-11 Identities = 77/94 (82%), Gaps = 3/94 (3%) Strand=Plus/Plus Query 2175311 GTCGAGGTCGGGGTCGCTGGCCAGGCCCTTCCACCCGACGGTCGTGCGCGGCTTTTCGAC 2175370 ||||| ||| |||||| || |||||||||||| |||||||| ||||| ||||| |||| Sbjct 222741 GTCGACGTCCGGGTCGTTGATCAGGCCCTTCCAGCCGACGGTGGTGCGGGGCTTCTCGAG 222800 Query 2175371 ATAGGCGCGCATGACCACCAGGAGAGCGTCGCCG 2175404 ||||||||||||| || | |||| ||||||| Sbjct 222801 GTAGGCGCGCATGATGAC--GCAGAG-GTCGCCG 222831 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916150237396856