Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20ampelina_20[genbank_20GCA_5F001630405.1_202016-04-25] 904 sequences; 59,495,866 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq427 145 5e-30 seq157 143 2e-29 seq230 122 6e-23 >seq427 Length=29395 Score = 145 bits (160), Expect = 5e-30 Identities = 163/216 (75%), Gaps = 8/216 (4%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||||||||||| ||| |||||||||||||| ||||| || ||| |||| | || Sbjct 25453 AGGACCAGGTGAAGAGTGGATTCCTTCTGAATGTTGTAGTCGGAGAGGGTGCGGCCGTCC 25394 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || |||||||| ||||||||||| || ||||||||| | || | ||||||||||| Sbjct 25393 TCAAGCTGCTTTCCAGCGAAGATCAGACGCTGCTGGTCTGGGGGGATACCCTCCTTGTCC 25334 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTAT 34941 | || || ||||| || | ||||| ||| || |||||| || | ||| || Sbjct 25333 TGGATCTTGGACTTGAC--AT--TGTCGATGGTATCAGAGGACTCGACCTCGAGGGTAAT 25278 Query 34942 GGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 |||||| || || || ||||| || ||||||||||| Sbjct 25277 GGTCTTGCCAGTCAGAGTCTTGACGAAGATCTGCAT 25242 Score = 123 bits (136), Expect = 2e-23 Identities = 159/217 (73%), Gaps = 8/217 (4%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||| || || | ||| |||||| |||||||| ||||| || ||| |||| | || Sbjct 25225 AGGACGAGATGGAGGGTAGACTCCTTTTGAATGTTGTAGTCGGAGAGGGTGCGGCCGTCC 25166 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || |||||||| ||||| ||||| || || |||||||| | || | ||||||||||| Sbjct 25165 TCGAGTTGCTTGCCGGCAAAGATAAGACGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCT 25106 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTAT 34941 | || || ||||| || | ||||| || || |||||| || | || || Sbjct 25105 TGGATCTTGGACTTGAC--AT--TGTCGATGGTATCGGAGGACTCGACCTCGAGCGTGAT 25050 Query 34942 GGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 |||||| || ||||||||||| || |||||||||||| Sbjct 25049 GGTCTTGCCTGTGAGGGTCTTCACGAAGATCTGCATG 25013 Score = 107 bits (118), Expect = 1e-18 Identities = 151/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||||||| | || ||||||||| ||||| ||||| ||||| | || |||| Sbjct 25681 AGCACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCAGATAGCGTCCGGCCATCT 25622 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 |||| ||||| || ||||| || || || ||||||||| | || | ||||||||||| Sbjct 25621 TCCAACTGCTTGCCAGCGAAAATGAGACGCTGCTGGTCTGGTGGAATTCCCTCCTTGTCC 25562 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || || ||| | |||| || | |||||| |||| || || ||| Sbjct 25561 TGAATCTTAGACTTCACGTTGTCAATCGTGTCTGATGACTCGACCTCAAGCGTGATCGTC 25502 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || ||||| | |||||| || || |||||||| Sbjct 25501 TTGCCCGTCAAGGTCTTGACGAAAATCTGCAT 25470 >seq157 Length=302622 Score = 143 bits (158), Expect = 2e-29 Identities = 165/220 (75%), Gaps = 8/220 (4%) Strand=Plus/Plus Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824 |||||||||||| | |||| ||||||||| ||||| ||||| || ||| | || | || Sbjct 142261 CAGGACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTACGGCCGTC 142320 Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884 || || ||||| |||||||||||||| || ||||||||| | || | || |||||||| Sbjct 142321 CTCGAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCTGGGGGAATGCCTTCCTTGTC 142380 Query 34885 GTTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTA 34940 | || || ||||| || | ||||| || | ||| || |||| ||| | Sbjct 142381 CTGGATCTTGGACTTGAC--AT--TGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGA 142436 Query 34941 TGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATGAT 34980 | ||||| |||||||||||||| || |||||||||||||| Sbjct 142437 TAGTCTTGCCCGTGAGGGTCTTCACGAAGATCTGCATGAT 142476 >seq230 Length=63387 Score = 122 bits (134), Expect = 6e-23 Identities = 136/182 (75%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 34788 CCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGA 34847 ||||||| ||||| ||||| || ||| |||| |||| || || ||||| |||||||||| Sbjct 45657 CCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCCTCAAGCTGCTTGCCGGCGAAGA 45716 Query 34848 TCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATG 34907 ||| ||| ||||||||| | || | ||||||||||| | || || |||||| Sbjct 45717 TCAATCGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGT 45776 Query 34908 CTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAA 34967 | || | ||| || ||| || |||| ||| || ||||| ||||| |||||||| || | Sbjct 45777 CGATGGTGTCAGAGGACTCCACCTCAAGGGTGATAGTCTTGCCCGTCAGGGTCTTCACGA 45836 Query 34968 AG 34969 || Sbjct 45837 AG 45838 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325689211679576