Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20ampelina_20[genbank_20GCA_5F001630405.1_202016-04-25] 904 sequences; 59,495,866 total letters Query= NC_023423.1 Length=610033 Score E Sequences producing significant alignments: (Bits) Value seq180 109 2e-18 >seq180 Length=76094 Score = 109 bits (120), Expect = 2e-18 Identities = 124/163 (76%), Gaps = 5/163 (3%) Strand=Plus/Plus Query 309684 CTCCATCAACTTGGCGATAGTCATACGAGAAGGAATGGCAAGAGGGTTGATGAGAATGTC 309743 ||| ||||| | || || ||||||||||| |||||||| | |||||||||| |||||| Sbjct 18847 CTCGATCAAGTGAGCAATTGTCATACGAGATGGAATGGCGTGGGGGTTGATGATAATGTC 18906 Query 309744 AGGTCTCATTCCGGTGATTGGGTTGAAAGGCATATCTT-CTTCAGGTACAATCAAACCAA 309802 |||| | | || | | |||| ||||| |||| || |||| | | | ||||| Sbjct 18907 AGGTGTAACACCTTCG---CGACTGAATGGCATGTCTTCCTGGCGGTA-AGTGACACCAA 18962 Query 309803 TAGTTCCCTTTTGAGCGTGCCTGGAAGCAAACTTGTCACCAAT 309845 |||| ||||||||| |||| | |||||||||||||||||||| Sbjct 18963 TAGTGCCCTTTTGACCGTGACGAGAAGCAAACTTGTCACCAAT 19005 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1951951791256512