Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20ampelina_20[genbank_20GCA_5F001630405.1_202016-04-25] 904 sequences; 59,495,866 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq48 340 2e-88 seq157 132 5e-26 seq427 120 3e-22 seq230 102 8e-17 >seq48 Length=122101 Score = 340 bits (376), Expect = 2e-88 Identities = 1136/1749 (65%), Gaps = 43/1749 (2%) Strand=Plus/Plus Query 148053 GACTGGCTCTGGTCAATGAACGCGCCACGGTCAGCGGCCATTT---CAATGAGTCGCTTT 148109 ||||| ||| |||||||| || ||||||||||| ||||| | ||||| ||| | Sbjct 15604 GACTGAGACTGATCAATGAAGGCACCACGGTCAGCAGCCATCTGCACAATG-GTCCTCTG 15662 Query 148110 ATCTTCATCTCCCAGGCCGTCTTGTACAGCCGCTTGATATGATCGGGAATGCCGTCGATG 148169 | ||||||||| | |||||||| || |||||||| | | || |||| ||| Sbjct 15663 AGAG--ATCTCCCAGACGGTCTTGTAGAGGGCCTTGATATCAGCCGGGATGCTAGGAATG 15720 Query 148170 CGCTGCACCGAGCCGCGGTGCGCAAAAATCTGATTGCGCATTTCGTCCGTGTATAGGTTG 148229 ||| | || || | || | || | || ||| | || | | | | | Sbjct 15721 TTCTGAATGGAACCATCCTCGGCGATGATACGGTTCTTCATGGCCTCAGACCACAAGCCG 15780 Query 148230 AGCTCGATCAGGTCATCGATCAGATACTGATTCACCACCTGAAACTCGCCGGCGAGCACG 148289 ||||| |||| || || || | | || || ||||| |||||||| |||||||| Sbjct 15781 AGCTCTGTCAGATCCCTGAGGAGCCAAGGGTTGACGACCTGGAACTCGCCAGCGAGCACA 15840 Query 148290 CGCCGCAGATACACGTTGCTCGTAAACGGTTCAAACGACTCGTTGTTGCCCAAAATCTGC 148349 || ||| | || | |||| || | || ||||| |||| |||||||||| |||||| Sbjct 15841 CGTCGCTGGTAGATGTTGGAGGTGTATGGCTCAAAGCACTCATTGTTGCCCAGGATCTGC 15900 Query 148350 GCGGTCGTTGCCGTGGGCATGTACGCTACCAGCAGCGAGTTGCGCAAACCGCGATTTTTT 148409 | |||| || |||||||| || | || ||| |||||| | ||| | || Sbjct 15901 GACGTCGACGCAGTGGGCATTGGTGCCAGCAACAGGCTGTTGCGAACACCAGTCTCCTTG 15960 Query 148410 ATTTTGCGCTTCAGAGCCGCCCAGTCCCAGAGCGGCGACGGTGTCACGTTCCACATGTCG 148469 || || ||| || || ||||||||||||| || || | || |||||||||||| Sbjct 15961 ATCTTCTCCTTGAGCGCATCCCAGTCCCAGAGGTCGGAGGGCTTGACATTCCACATGTCG 16020 Query 148470 TACTGCAGAATGCCGCGGCTAGCGGGGCTGCCCTCGTACGAGCTGTACGGTCCGTGCGCC 148529 ||||||| ||||| | |||||||||||||||| | |||| || || | | || Sbjct 16021 AACTGCAGGATGCCTTGTGAGACGGGGCTGCCCTCGTATGTCTTGTAGGGGCCCTCCACC 16080 Query 148530 GCCGCCAGTTCGCAGCTCGCCTCGAGCGCGCCGTAGTAAATCGTCTCGGCAATTTGCCTG 148589 || | || | || ||| || ||| ||| || |||||| || ||| || Sbjct 16081 TTGGCAATGTCACTTGATGCGGTGAGGGCAGCGTGGTAGATGGTCTCGAAGATCTGCTTG 16140 Query 148590 TTGAGC---AGCGCCGCCGACTCGCTTTCGTACGGCATACGCAGCCGCACAAACGCGTCG 148646 || ||| | ||| ||| | ||| | ||||| || || || || |||||| Sbjct 16141 TTCAGCTCACGGGCCTCCG---GGGAGTCGAAAGGCATGCGTAGTGCCAAGAATGCGTCG 16197 Query 148647 GCAAGGCCCTGTACGCCCACGCCAATGGGCCGGTGTTTAATGTTGGAGAGGCGCGCGCTC 148706 ||||| ||||| ||||| || ||||| || |||||| |||||| | | || | Sbjct 16198 GCAAGACCCTGAACGCCGACACCAATAGGTCGGTGTCGCATGTTGCTGTTGTAGGCCTCC 16257 Query 148707 TCGAGCGGATAGTGGTTGCGGTCGATGATCTTGTCAAGATTGCGCACCACCACCTTTGTA 148766 | || ||| ||||||||| || |||||||||| || ||||| || || |||| ||| Sbjct 16258 TTGACCGGGTAGTGGTTGACATCAATGATCTTGTTCAGGTTGCGGACGACGACCTGGGTA 16317 Query 148767 A--TTCTGC----GCAGCAATTCAAAATCGTACTTGTCATCTACGATGCATCGGTTCACG 148820 | | ||| || | || | | || ||||| | | | || | || Sbjct 16318 ACCTCGTGCAACTGCTGGAAGTTGTAGCAGTTGTTGTCGTAGTCAACATATGCGGGCAGA 16377 Query 148821 GCGATAGAGGCTAGATTGCACACGGCCGTCTCATCCGGGGCGCTGTACTCTACGATCTCG 148880 || || ||||| | ||||||||||| |||||| ||||| |||||| | |||||| Sbjct 16378 GCAATGGAGGCCAAGTTGCACACGGCGACCTCATCTGGGGCAGAGTACTCAATGATCTCA 16437 Query 148881 GCGCACAGATTGCTGCATTTGATCACGCCCACGTTCTTTTGATTGCTCTTGCTGTTGCAC 148940 | ||| || ||| || | ||| |||| |||||| || |||||||| | |||| Sbjct 16438 GTGCAAAGGTTGGAGCTTCGGATGGTACCCAGGTTCTTCTGGTTGCTCTTCCGGTTGGCG 16497 Query 148941 GCGTCCTTGTACAGCATGTACGGTCCGCCAGTTTCCACCTGCGTTTCCACTATG--AACC 148998 |||||||||||||||| | || |||||| || ||| | || | ||| | | Sbjct 16498 TGGTCCTTGTACAGCATGAAGGGGTTGCCAGTCTCAGTCTGAGCCTCGAGAATGGCATAC 16557 Query 148999 GATGCAGGTCCTGCGCGCGCA----CTTGCTGCTCGTAGCGACCCTCCTGCTCGTA--TA 149052 | ||| | ||| || || ||||| | |||||||||| |||||| Sbjct 16558 CA--CAGCTTCTGGGCCTTCATGGTCTTGCGAC----CACGACCCTCCTTCTCGTACTGC 16611 Query 149053 AAGTATACAGCCGCTCGAACGCCTCGCCGTAGCAATCGTCGAGACCGGGGCACTTGTGCG 149112 ||| | ||| ||| ||| |||| |||||||| ||| |||| || || |||| || | Sbjct 16612 TCGTAGAGAGC--CTCAAACTCCTCACCGTAGCAGTCGGCGAGGCCAGGACACTCGTTAG 16669 Query 149113 GGCACATGAGCGACCACACGCCGTCCGCGTACACGCGCTTCATAAACAGATCGGGCACCC 149172 ||||||| || | ||| | |||| | | || |||||||| || |||||||| | || Sbjct 16670 GGCACATCAGGGTCCAGTCACCGTTCTTCTCGACCCGCTTCATGAAAAGATCGGGGATCC 16729 Query 149173 AGAGCGCGTACATGAGGTCGCGCGCCTTGCAGTCTTCGGCGCCCATGTTGCGGCGCAGGT 149232 |||| || | || || || || | || || || ||| |||||||| Sbjct 16730 AGAGGGCAAGGAAAAGATCACGGGCTCGGATCTCCTCCTTACCGTGGTTCTTGCGCAGGT 16789 Query 149233 TGAGCACGCTGAATATGTCCGCGTGCCACGGCTCAATGTACACCGCGAGCGCGCCCTTGC 149292 || | ||||| || |||||||| ||||||| ||| | |||| || || | Sbjct 16790 CAAGGAACTCGAATACATCGGCGTGCCATGGCTCAAGGTAGATAGCGAAGGCACCGGGAC 16849 Query 149293 GC---TTGCCGCCCTGGTCGACGTGGCGCACCATGTTGTTAAACACTCGAACCATAGGTT 149349 || ||||| ||||||||||||| || | ||||||| || || || | ||| || Sbjct 16850 GCTTGTTGCCACCCTGGTCGACGTATCGGGCGGTGTTGTTGAAGACCCGCAGCATTGGGG 16909 Query 149350 CAATGCCACTGGCAGTGCCGTTAGT-AGAGCTAATGCGACTGCCGCGCGCTCGCACTTTG 149408 ||||||| | | || |||||||| ||| ||| |||| || || | | Sbjct 16910 TAATGCCATTAGAGGTACCGTTAGTGCCAGC-GATGTATGAGCCGGTGGCACGGATGCGG 16968 Query 149409 TGCACGTTGACGCCGATGCC-GCCGCCGTACTTTGAGATGGCCGCGC-AGTCGCCGAGCG 149466 |||||||| | || || || ||||| | ||| ||||| || | |||| || | Sbjct 16969 TGCACGTTCAGACCAATTCCACCCGCCAT-CTTAGAGATCATAGCACAAGTCTTTAAG-G 17026 Query 149467 TCGAGTAGATGCCCTCGATGCTGTCGCGCTTCATGGTCAGCAGAAAGCACGAGCACATTT 149526 | ||||||||||| |||||||| ||||||| | || ||||| || ||| | Sbjct 17027 TGTCATAGATGCCCTCAATGCTGTCCTCCTTCATGTCGACGAGGAAGCATGATGACAGCT 17086 Query 149527 GCGGAAAACGCGTGCCGGCCGCGAACATGGTGGGGCTGGCGTGTGTAAAATATTTCTGGC 149586 | || | | ||||| || ||||| |||||| ||| ||||| || | || | Sbjct 17087 GGGGCTGAGGAGTGCCAGCATTGAACAATGTGGGGGAGGCATGTGTGAAGAACTTGTTTG 17146 Query 149587 TCATCATCTCGTACGACTCGAGCACGCGGTCCATGTCATCGCCATGGATGCCTATGGCGA 149646 ||||| | ||| | ||| | || | || | || || || ||| || | |||| Sbjct 17147 ACATCAGGTTGTAGGTCTCAATGACCCTCTCGACATCGTCTCCCCAGATACCGACAGCGA 17206 Query 149647 CGCGCATCAGCATATGCTGCGGTCGCTCCGCCACTTTGTTTCCAATTTTGAGCAAGTAGC 149706 | ||||| | ||| ||||| || ||||| | ||||| | | ||||| | ||| Sbjct 17207 CACGCATGATCATGTGCTGTGGCCGCTCGACAACTTTACCATCGAGCTTGAGGAGGTACG 17266 Query 149707 CGTTTTCTAGTGTCTTGTAGCCAAAGTACTTGTAGTCAAAGTCGCGGCCGTGGTCAATGG 149766 || ||||||||| |||| ||||| | ||| | ||||| ||| ||| | |||||| Sbjct 17267 AACGCTCGAGTGTCTTGAAGCCGAAGTATTGGTAACCGAAGTCACGGTCGTAGACAATGG 17326 Query 149767 CGGCGTCGA 149775 ||| ||||| Sbjct 17327 CGGAGTCGA 17335 >seq157 Length=302622 Score = 132 bits (146), Expect = 5e-26 Identities = 151/201 (75%), Gaps = 4/201 (2%) Strand=Plus/Plus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGA--GTCCTCGAGCTGCTTG 133520 ||||||||| ||||| || ||||| ||| | || ||| |||||||||||||||| Sbjct 142276 GGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGT--ACGGCCGTCCTCGAGCTGCTTG 142333 Query 133521 CCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGC 133580 || ||| | || || ||||||||||| || || |||||||||||||| |||||| | Sbjct 142334 CCGGCGAAGATCAGACGCTGCTGGTCTGGGGGAATGCCTTCCTTGTCCTGGATCTTGGAC 142393 Query 133581 TTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGA 133640 |||| | || | ||||||| | |||||| || | ||||| || ||||| || || Sbjct 142394 TTGACATTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATAGTCTTGCCCGTGAGG 142453 Query 133641 GTTTTTACGAAAATCTGCATG 133661 || || ||||| ||||||||| Sbjct 142454 GTCTTCACGAAGATCTGCATG 142474 >seq427 Length=29395 Score = 120 bits (132), Expect = 3e-22 Identities = 150/206 (73%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTG 133516 ||| | ||| ||||| || || || ||||| ||| | ||| ||||||||| || Sbjct 25217 ATGGAGGGTAGACTCCTTTTGAATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCGAGTTG 25158 Query 133517 CTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTT 133576 |||||| || | || || ||||||||||| || |||||||| |||||||| |||||| Sbjct 25157 CTTGCCGGCAAAGATAAGACGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCTTGGATCTT 25098 Query 133577 TTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGT 133636 ||||| | || | || |||| || ||| || |||| |||| ||| ||||| || Sbjct 25097 GGACTTGACATTGTCGATGGTATCGGAGGACTCGACCTCGAGCGTGATGGTCTTGCCTGT 25038 Query 133637 CAGAGTTTTTACGAAAATCTGCATGG 133662 || || || ||||| |||||||||| Sbjct 25037 GAGGGTCTTCACGAAGATCTGCATGG 25012 Score = 116 bits (128), Expect = 4e-21 Identities = 144/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCC 133523 ||||| || ||||| || ||||| ||| | ||| |||||| |||||||| || Sbjct 25438 GTGGATTCCTTCTGAATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCAAGCTGCTTTCCA 25379 Query 133524 GCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTG 133583 ||| | || || ||||||||||| || ||||| || |||||||| |||||| |||| Sbjct 25378 GCGAAGATCAGACGCTGCTGGTCTGGGGGGATACCCTCCTTGTCCTGGATCTTGGACTTG 25319 Query 133584 AGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTT 133643 | | || | || || | || ||| || |||| ||| | ||| ||||| |||||||| Sbjct 25318 ACATTGTCGATGGTATCAGAGGACTCGACCTCGAGGGTAATGGTCTTGCCAGTCAGAGTC 25259 Query 133644 TTTACGAAAATCTGCAT 133660 || ||||| |||||||| Sbjct 25258 TTGACGAAGATCTGCAT 25242 Score = 98.7 bits (108), Expect = 1e-15 Identities = 142/198 (72%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||| ||||| || ||||| || | ||| | | | || || | ||||||||| Sbjct 25666 GTCGACTCCTTCTGGATGTTGTAGTCAGATAGCGTCCGGCCA-TCTTCCAACTGCTTGCC 25608 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| ||||||| ||||||||||| || || || || |||||||| ||||| ||| Sbjct 25607 AGCGAAAATGAGACGCTGCTGGTCTGGTGGAATTCCCTCCTTGTCCTGAATCTTAGACTT 25548 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 | | |||| |||||| | | ||| || || | |||| || ||||| |||| || Sbjct 25547 CACGTTGTCAATCGTGTCTGATGACTCGACCTCAAGCGTGATCGTCTTGCCCGTCAAGGT 25488 Query 133643 TTTTACGAAAATCTGCAT 133660 || |||||||||||||| Sbjct 25487 CTTGACGAAAATCTGCAT 25470 >seq230 Length=63387 Score = 102 bits (112), Expect = 8e-17 Identities = 132/180 (73%), Gaps = 2/180 (1%) Strand=Plus/Plus Query 133473 TTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCCCGCGTAAAT 133531 ||||| || ||||| ||| || ||| | | | ||||| ||||||||||| ||| | || Sbjct 45659 TTCTGGATGTTGTAGTCGGACAGGGTGCGGCCA-TCCTCAAGCTGCTTGCCGGCGAAGAT 45717 Query 133532 GAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTGAGCTGCTC 133591 | ||||||||||| || || ||||| |||||||| |||||| ||||| | || Sbjct 45718 CAATCGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTC 45777 Query 133592 AACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTTTTTACGAA 133651 | ||||| | || |||||| || | ||||| || ||||| ||||| || || ||||| Sbjct 45778 GATGGTGTCAGAGGACTCCACCTCAAGGGTGATAGTCTTGCCCGTCAGGGTCTTCACGAA 45837 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483415337344960