Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20ampelina_20[genbank_20GCA_5F001630405.1_202016-04-25] 904 sequences; 59,495,866 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq48 192 6e-44 seq157 89.7 5e-13 seq427 82.4 7e-11 >seq48 Length=122101 Score = 192 bits (212), Expect = 6e-44 Identities = 978/1536 (64%), Gaps = 41/1536 (3%) Strand=Plus/Plus Query 146893 TTGACCACTTGAAACTCGCCCGCCAGCACACGTCTGAGATACACATTGCTAGTGAAAGGC 146952 ||||| || || |||||||| || |||||||||| | || | ||| ||| | ||| Sbjct 15811 TTGACGACCTGGAACTCGCCAGCGAGCACACGTCGCTGGTAGATGTTGGAGGTGTATGGC 15870 Query 146953 TCAAAAGACTCATTATTGCCTAATATTTGGGCCGTGGTTGCGGTAGGCATGTACGCCACC 147012 ||||| ||||||| ||||| | || || | ||| | || || ||||| |||| | Sbjct 15871 TCAAAGCACTCATTGTTGCCCAGGATCTGCGACGTCGACGCAGTGGGCATTGGTGCCAGC 15930 Query 147013 AACAATGAATTTCGCAGACCGTACGCACGGATGTTGTCCTTCAAAGTTTGCCAGTCCCAC 147072 |||| || || | ||| | | ||| || ||||| | | | ||||||||| Sbjct 15931 AACAGGCTGTTGCGAACACCAGTCTCCTTGATCTTCTCCTTGAGCGCATCCCAGTCCCAG 15990 Query 147073 A--TCGACGAGGGCGTCACGTTCCACATGTCGTACTGGAGCACTCCTCGACTGGCGGGAC 147130 | ||| |||||| | || |||||||||||| |||| || | ||| | | |||| | Sbjct 15991 AGGTCG--GAGGGCTTGACATTCCACATGTCGAACTGCAGGATGCCTTGTGAGACGGGGC 16048 Query 147131 TGCCAGCGAACGTAGTGTAGCTTCCGTCGCGCTGCGCCAATTCACAGCTTGCCTCGAGCG 147190 |||| || | || ||||| || || || || | |||| ||| ||| | Sbjct 16049 TGCCCTCGTATGTCTTGTAGGGGCCCTCCACCTTGGCAATGTCACTTGATGCGGTGAGGG 16108 Query 147191 CTCCATAGTATATGGTTTCGGCGATTTGTTTGTTTAG--GACGGTCGCTTCTTCGCTCTC 147248 | | | ||| ||||| ||| ||| || ||||| || |||| || || | || Sbjct 16109 CAGCGTGGTAGATGGTCTCGAAGATCTGCTTGTTCAGCTCACGG--GCCTCCGGGGAGTC 16166 Query 147249 GTAAGGCATACGCAGAAGCACAAAGGCATCGGCCAAACCCTGGATACCGACGCCGATAGG 147308 | ||||||| || || || || || ||||| | |||||| | ||||| || ||||| Sbjct 16167 GAAAGGCATGCGTAGTGCCAAGAATGCGTCGGCAAGACCCTGAACGCCGACACCAATAGG 16226 Query 147309 TCGATGCTTTTCGTTGCTGCGCTTCGCGCTCGCT-ATGGGATAGTGGTTGCGATCAATAA 147367 ||| || ||||||| | || ||| | | || ||||||||| |||||| | Sbjct 16227 TCGGTGTCGCATGTTGCTGTTGTAGGC-CTCCTTGACCGGGTAGTGGTTGACATCAATGA 16285 Query 147368 TCTTGTTGAGGTTACGCACTACAACTTTAGTTATTGTTTTGAGTTTCTCGAAATCATA-- 147425 ||||||| ||||| || || || || | || | | | | || ||| | || Sbjct 16286 TCTTGTTCAGGTTGCGGACGACGACCTGGGTAACCTCGTGCAACTGCTGGAAGTTGTAGC 16345 Query 147426 AG-TCCCGTCTTCGACACGTACGCATTGGTTCACGGCGATAGACGCCAGATTGCAGACGG 147484 || | ||| | | || || || | || || || || |||| ||||| |||| Sbjct 16346 AGTTGTTGTCGTAGTCA---ACATATGCGGGCAGAGCAATGGAGGCCAAGTTGCACACGG 16402 Query 147485 CCGTCTCTTCGGCGTCGCTGTACTGCACGATTTCGGCGCACAGGTTGCTGCATTTTATGA 147544 | ||| || | | | ||||| | ||| || | ||| |||||| || | ||| Sbjct 16403 CGACCTCATCTGGGGCAGAGTACTCAATGATCTCAGTGCAAAGGTTGGAGCTTCGGATGG 16462 Query 147545 CTCCCAAATTTTGCTGATTGCTTTTCCGATTGCACGCGTCTTTGAAGAGCATGTACGGTC 147604 |||| || | ||| ||||| ||||| ||| ||| ||| | |||||| | || Sbjct 16463 TACCCAGGTTCTTCTGGTTGCTCTTCCGGTTGGCGTGGTCCTTGTACAGCATGAAGGGGT 16522 Query 147605 CGCCGGTCTCGACTTGCGTTTC---AACGATAAACCTATGCAGGTCCTGCGCTCGCACCC 147661 ||| ||||| || | || || | | ||| ||| | ||| || || Sbjct 16523 TGCCAGTCTCAGTCTGAGCCTCGAGAATGGCATACC---ACAGCTTCTGGGCCTTCATGG 16579 Query 147662 GCTGCCGATAGCGGCCCTCGTTTTCGTACCGCTCGTACAACCGCTCAAACTCGTCGCCGT 147721 || ||| || ||||| || |||||| ||||||| | ||||||||| || |||| Sbjct 16580 TCTTGCGACCACGACCCTCCTTCTCGTACTGCTCGTAGAGAGCCTCAAACTCCTCACCGT 16639 Query 147722 AGCAATCGGCAAGGCCGGGACACTGATGCGGACACATCAGCGACCACATGTCGTCCGCGT 147781 |||| ||||| ||||| ||||||| | || |||||||| | ||| ||| | | Sbjct 16640 AGCAGTCGGCGAGGCCAGGACACTCGTTAGGGCACATCAGGGTCCAGTCACCGTTCTTCT 16699 Query 147782 TAACGCGTCGCATAAACAGATCCGGCACCCACAGCGCGTACATAAGATCGCGCGCTTTGC 147841 || || ||| || ||||| || | ||| || || | |||||| || ||| | Sbjct 16700 CGACCCGCTTCATGAAAAGATCGGGGATCCAGAGGGCAAGGAAAAGATCACGGGCTCGGA 16759 Query 147842 AATCCTC---GGCGCCCATGTTGCGTTTCAAATTAA-GCACGCTATAGATGTCGGCGTGC 147897 ||||| || | ||||| || | || | || | | | | ||||||||| Sbjct 16760 TCTCCTCCTTACCGTGGTTCTTGCG---CAGGTCAAGGAACTCGA-ATACATCGGCGTGC 16815 Query 147898 CAGGGTTCAATGTAGACGGCCAGCGCACCTTTACGC---TTTCCGCCCTGGTCGACATGG 147954 || || |||| ||||| || | ||||| |||| || || ||||||||||| | Sbjct 16816 CATGGCTCAAGGTAGATAGCGAAGGCACCGGGACGCTTGTTGCCACCCTGGTCGACGTAT 16875 Query 147955 CGCACCATGTTGTTAAACACGCGCACCATGGGTTCCAGGCCGCTCGCAGTGCCGTTGGTG 148014 || | ||||||| || || |||| ||| || | ||| | | || ||||| ||| Sbjct 16876 CGGGCGGTGTTGTTGAAGACCCGCAGCATTGGGGTAATGCCATTAGAGGTACCGTTAGTG 16935 Query 148015 GAATTGATCTTGCTGCCGCGGGCTCGCACTTCGTGCACGTTAACGCCAATGCC-GCCGCC 148073 | ||| | |||| ||| || | ||||||||| | ||||| || ||||| Sbjct 16936 CCAGCGATGTATGAGCCGGTGGCACGGATGCGGTGCACGTTCAGACCAATTCCACCCGCC 16995 Query 148074 GTACTTTGATATGGCAGCGCAATCGCCCAATGTCGTGTAGATGCCGTCGATGCTGTCGTT 148133 | ||| || || ||| ||| || || |||||||| || |||||||| | Sbjct 16996 AT-CTTAGAGATCATAGCACAAGTCTTTAAGGTGTCATAGATGCCCTCAATGCTGTCCTC 17054 Query 148134 TTTGACGCCAAGCAAAAAACACGAACACATTTGCGGAATCCGCGTTCCCGCCGAGAAAAG 148193 || | | | | | || || || ||| || || | || || || ||| | Sbjct 17055 CTTCATGTCGACGAGGAAGCATGATGACAGCTGGGGCTGAGGAGTGCCAGCATTGAACAA 17114 Query 148194 GGTGGGACTCGCGTGCGTAAACAA--TTTTTGACTCATCATGCGATACGTCTCAAT-AGC 148250 ||||| || || || || || | ||||| ||||| | || |||||||| | | Sbjct 17115 TGTGGGGGAGGCATGTGTGAAGAACTTGTTTGA--CATCAGGTTGTAGGTCTCAATGACC 17172 Query 148251 GTCTTCGATGTCGTCGCCGTGAATGCCCAGCGCGACGCGCATGAGCATGTGCTGTGGTCG 148310 || |||| ||||| || || || | ||||| ||||||| |||||||||||| || Sbjct 17173 CTC-TCGACATCGTCTCCCCAGATACCGACAGCGACACGCATGATCATGTGCTGTGGCCG 17231 Query 148311 TTCGGCAACTTGATTGTTGATCTTGAGAAGATATCCATTTTCGAGGGTTTTGTAACCAAA 148370 ||| |||||| | | || |||||| || || | ||||| || ||| | || || Sbjct 17232 CTCGACAACTTTACCATCGAGCTTGAGGAGGTACGAACGCTCGAGTGTCTTGAAGCCGAA 17291 Query 148371 GTACTTGTAATCAAAATCTAGCTCGTAAGCGATGGC 148406 ||| | |||| | || || | ||||| | ||||| Sbjct 17292 GTATTGGTAACCGAAGTCACGGTCGTAGACAATGGC 17327 >seq157 Length=302622 Score = 89.7 bits (98), Expect = 5e-13 Identities = 154/224 (69%), Gaps = 0/224 (0%) Strand=Plus/Plus Query 131902 ACGCAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGT 131961 ||||| ||||| |||| || | | | ||||| || || |||||||||||| | ||| Sbjct 142252 ACGCAGGCGCAGGACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGT 142311 Query 131962 ACGCGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCC 132021 ||| || |||||||| || |||| |||| |||||||| || ||||| || ||||| Sbjct 142312 ACGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCTGGGGGAATGCC 142371 Query 132022 TTCTTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGAC 132081 ||| || || || || || | | || | || |||| | |||||| || | Sbjct 142372 TTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCGGAAGACTCCACCTCAAG 142431 Query 132082 CGTCAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCATGA 132125 || | || || || || || || || | ||| |||||||||| Sbjct 142432 GGTGATAGTCTTGCCCGTGAGGGTCTTCACGAAGATCTGCATGA 142475 >seq427 Length=29395 Score = 82.4 bits (90), Expect = 7e-11 Identities = 135/195 (69%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 ||||| |||||||||||||||||| | ||| || || ||||| || || |||| | Sbjct 25207 GACTCCTTTTGAATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCGAGTTGCTTGCCGGCA 25148 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 |||| |||||||| || || || || ||||| || || || || || || | Sbjct 25147 AAGATAAGACGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCTTGGATCTTGGACTTGACA 25088 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 | || | ||||||| | ||| || |||| ||| | || || || || || || || Sbjct 25087 TTGTCGATGGTATCGGAGGACTCGACCTCGAGCGTGATGGTCTTGCCTGTGAGGGTCTTC 25028 Query 132110 ATGAAAATCTGCATG 132124 | ||| ||||||||| Sbjct 25027 ACGAAGATCTGCATG 25013 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476605814293440