Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20ampelina_20[genbank_20GCA_5F001630405.1_202016-04-25] 904 sequences; 59,495,866 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq399 143 3e-29 >seq399 Length=33074 Score = 143 bits (158), Expect = 3e-29 Identities = 279/402 (69%), Gaps = 10/402 (2%) Strand=Plus/Plus Query 147105 CACGTAAAACTG-GCACAGGATGTGGCACGGCGGCAGCGCCATGGCGGGCAGGTCCGCGG 147163 |||||||||||| ||| | ||||||||||||||||||||||| |||||| || | Sbjct 2661 CACGTAAAACTGCGCAAAC-ATGTGGCACGGCGGCAGCGCCATCTTCTTCAGGTCGGCCG 2719 Query 147164 GGTTCCAGGCCGAGACCACCAGCCGCCTGCTCTCGGGGTTCCTCTTAATCTCTTCGATAA 147223 ||||||| || | | | |||| | | ||||| ||| | || | ||| | Sbjct 2720 GGTTCCATGCGCTCATGATAATGCGCCGGTCGTGAGGGTTGTGCTTGAGCTTGTGGATCA 2779 Query 147224 CCCACCTCAGCTGGTCCACGCCCTGGCCCCCGTAGTTTGTCCCGCAGTCCACGTACCTGG 147283 || ||||||||| |||||||||||| ||||| | | | ||| |||||| | Sbjct 2780 CCTCGGCCAGCTGGTCGACGCCCTGGCCCGTGTAGTCGGCCTTGGCGTCGACGTACTCCG 2839 Query 147284 CCCCAAAGTGCCTCCACTGGAAGCCGTACACTGGCCCCAGGTCGCCGGGCTTTCTGTGCG 147343 ||||||| |||| ||||||||| |||||||| || || |||||||||| | | ||| | Sbjct 2840 CCCCAAAATGCCGCCACTGGAACCCGTACACGGGGCCTAGGTCGCCGGCTTCACGGTG-G 2898 Query 147344 AGAAGCCCGCCCGC--TTGAGAAACTCGGGGGACCCGTGGGCGTCCCAGATGCCCACTCC 147401 ||||| | ||| | ||| ||||| | ||||||| | |||||||||| || || Sbjct 2899 CCCAGCCC-CACGCTGTCGAGGTACTCGCGAGACCCGTTGCCGTCCCAGATCTTGACGCC 2957 Query 147402 CTTGGCGGAGAGCTCCTTAGAGTCCGTGGAGC-CCCG-GATGAACCAGAGCAGCTCCTCC 147459 || | ||||| | || | | || | |||| ||||||||| |||||||| | Sbjct 2958 CTGCTCTGAGAGGGAC--AGCGACGATGTCTCACCCGCGATGAACCACAGCAGCTCTGCG 3015 Query 147460 AAAACCCCCCTCCAAAAGACCCTCTTGGTGGTCAGCAGGGGG 147501 | ||| || | ||||| | ||| |||||||| || ||| Sbjct 3016 AGAACGGCCTTTTGGAAGACGCGCTTTGTGGTCAGGAGCGGG 3057 Score = 123 bits (136), Expect = 3e-23 Identities = 157/216 (73%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 146871 AATCTTGAGCTTGGGGAAGGGTCGGGGGTTCCTGGCCAGCTGAATTTTCAGGGGCTCCAC 146930 ||||| |||| ||||||| || || | ||| ||||||| | ||| | || || Sbjct 2361 AATCTCCAGCTCGGGGAAGTCGCGCGGCTCCCTCTCCAGCTGCACCCGCAGCGCGTCGAC 2420 Query 146931 GTGGTTGAGGTAGACGTGCGCGTCCCCCAGGGTGTGCACAAAGTCCCCCGGCTTAAGGCC 146990 ||||| || ||||||||||| |||| | |||| | | || || ||| | Sbjct 2421 GTGGTCTGCATACACGTGCGCGTCGCCCATGACGTGCGTCAGGCTGCCGGGGACGAGGTC 2480 Query 146991 GGTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAAGGGGACCCC 147050 | |||||| || | ||||| || ||||||||||||||||| |||||||| ||||| || Sbjct 2481 GCACACGTGCGCGATCATGTGCGTCAGCAGCGAGTAGCTGGCGATGTTGAAAGGGACGCC 2540 Query 147051 CAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCA 147086 |||||||||||| | || | ||||||||||||||| Sbjct 2541 CAGGCCCATGTCGCAGGAGCGCTGGTACAGCTGGCA 2576 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583481406585600