Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20ampelina_20[genbank_20GCA_5F001630405.1_202016-04-25] 904 sequences; 59,495,866 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq157 113 4e-20 seq230 105 6e-18 seq427 104 2e-17 >seq157 Length=302622 Score = 113 bits (124), Expect = 4e-20 Identities = 140/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| |||| | ||| || |||| || |||||||| || || || Sbjct 142282 CTCCTTCTGGATGTTGTAGTCGGAGAGGGTACGGCCGTCCTCGAGCTGCTTGCCGGCGAA 142341 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 |||| ||||||||||| | |||| || ||||||||| |||||| ||| | | | Sbjct 142342 GATCAGACGCTGCTGGTCTGGGGGAATGCCTTCCTTGTCCTGGATCTTGGACTTGACATT 142401 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | |||||| || |||||||| | ||||| || || ||||| | || ||||| Sbjct 142402 GTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATAGTCTTGCCCGTGAGGGTCTTCAC 142461 Query 35725 AAATATCTGCAT 35736 || |||||||| Sbjct 142462 GAAGATCTGCAT 142473 >seq230 Length=63387 Score = 105 bits (116), Expect = 6e-18 Identities = 134/182 (74%), Gaps = 2/182 (1%) Strand=Plus/Plus Query 35547 CCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATA 35606 |||| || |||||||| |||| || ||| || | || || |||||||| || || || | Sbjct 45657 CCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCCTCAAGCTGCTTGCCGGCGAAGA 45716 Query 35607 TCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG 35666 |||| ||||||||||| | |||| || |||||||||| |||||| ||| | |||| Sbjct 45717 TCAATCGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGA-CGTTG 45775 Query 35667 -CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725 | | ||||| || |||||||| | ||||| || || ||||||| || ||||| Sbjct 45776 TCGATGGTGTCAGAGGACTCCACCTCAAGGGTGATAGTCTTGCCCGTCAGGGTCTTCACG 45835 Query 35726 AA 35727 || Sbjct 45836 AA 45837 >seq427 Length=29395 Score = 104 bits (114), Expect = 2e-17 Identities = 138/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||||||||||||||| |||| | ||| || |||| || || ||||| || ||||| Sbjct 25205 CTCCTTTTGAATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCGAGTTGCTTGCCGGCAAA 25146 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | ||||||||||| | || | || ||||||||| |||||| ||| | | | Sbjct 25145 GATAAGACGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCTTGGATCTTGGACTTGACATT 25086 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | || ||| || || ||||| | |||||| || || || || | || ||||| Sbjct 25085 GTCGATGGTATCGGAGGACTCGACCTCGAGCGTGATGGTCTTGCCTGTGAGGGTCTTCAC 25026 Query 35725 AAATATCTGCAT 35736 || |||||||| Sbjct 25025 GAAGATCTGCAT 25014 Score = 104 bits (114), Expect = 2e-17 Identities = 151/211 (72%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 35527 CACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTC 35586 ||||| || | ||| |||||| || |||||||| || | | || || | || || Sbjct 25679 CACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCAGATAGCGTCCGGCCATCTTC 25620 Query 35587 CAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCAT 35646 || |||||| || || || || | ||||||||||| | |||| | |||||||||| Sbjct 25619 CAACTGCTTGCCAGCGAAAATGAGACGCTGCTGGTCTGGTGGAATTCCCTCCTTGTCCTG 25560 Query 35647 GATCTTTTGCTTCAGAGTTG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTT 35705 ||||| ||||| |||| | | |||||| || || ||||| | ||||||||| | Sbjct 25559 AATCTTAGACTTCA-CGTTGTCAATCGTGTCTGATGACTCGACCTCAAGCGTGATCGTCT 25501 Query 35706 TACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 | |||||||| || || || || |||||||| Sbjct 25500 TGCCCGTCAAGGTCTTGACGAAAATCTGCAT 25470 Score = 93.3 bits (102), Expect = 4e-14 Identities = 135/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 ||||| ||||||||||| |||| | ||| || |||| || |||||||| || || || Sbjct 25432 TCCTTCTGAATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCAAGCTGCTTTCCAGCGAAG 25373 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665 |||| ||||||||||| | || | | |||||||||| |||||| ||| | | | Sbjct 25372 ATCAGACGCTGCTGGTCTGGGGGGATACCCTCCTTGTCCTGGATCTTGGACTTGACATTG 25313 Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725 | | || || || || ||||| | || || || || || |||| ||| || || Sbjct 25312 TCGATGGTATCAGAGGACTCGACCTCGAGGGTAATGGTCTTGCCAGTCAGAGTCTTGACG 25253 Query 35726 AATATCTGCAT 35736 || |||||||| Sbjct 25252 AAGATCTGCAT 25242 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450788506032320