Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaporthe_20ampelina_20[genbank_20GCA_5F001630405.1_202016-04-25] 904 sequences; 59,495,866 total letters Query= NC_027925.1 Length=496396 Score E Sequences producing significant alignments: (Bits) Value seq56 107 6e-18 seq48 86.0 2e-11 >seq56 Length=117397 Score = 107 bits (118), Expect = 6e-18 Identities = 121/161 (75%), Gaps = 1/161 (1%) Strand=Plus/Minus Query 443707 AGCGACTAGTCGCTTTTGCTGTGGTCGAAGGACTGTTGTTTAGCGGCAGCTTTAGCCTCC 443766 ||||||| || || || |||| ||||| || | || || |||||| || || |||||| Sbjct 53494 AGCGACTGGTTGCCTTCGCTGCCGTCGAGGGCATCTTCTTCAGCGGC-GCATTCGCCTCC 53436 Query 443767 ATCTTCTGGTTGAAAAAGCGTGGACTTATGCACGGTCTGACCTTTAGTAACGAACTGATC 443826 || |||||| | || |||||||| || |||| || |||||||| ||||| || || Sbjct 53435 ATTTTCTGGCTCAAGAAGCGTGGCCTCATGCCTGGCCTGACCTTCTCCAACGAGCTCATT 53376 Query 443827 AGTCGGGACGAGGGTTTGCATTGCGACTTCGCCTGTCTTCT 443867 ||| || |||||| |||| ||||||||||||||| || Sbjct 53375 TCTCGTGATGAGGGTCTGCACACCGACTTCGCCTGTCTCCT 53335 >seq48 Length=122101 Score = 86.0 bits (94), Expect = 2e-11 Identities = 85/110 (77%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 254972 GGCATTATACCAATGATCCGTGTGTTCAACAACGTGGCTCGCTACGTCGATCAAGGGGGC 255031 ||||||| |||||| | || || ||||||||| || || |||||||| || || ||| Sbjct 16916 GGCATTACCCCAATGCTGCGGGTCTTCAACAACACCGCCCGATACGTCGACCAGGGTGGC 16857 Query 255032 GGCAAACGCCCAGGAGCGTTCACCATCTACCTGGAGCCGTGGCACGCCGA 255081 ||| || || || || ||| | |||||||| ||||| ||||||||||| Sbjct 16856 AACAAGCGTCCCGGTGCCTTCGCTATCTACCTTGAGCCATGGCACGCCGA 16807 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1588317603098280